Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0005465

Physical Location & Seq

Genomic Coordinates Reverse (-)

3269811 .. 3271931

Gene Structure 2121 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g04780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGGAGATCCCACTTTTGCGCTACGAAAATATTGCGTTGGATCAGTTCCAGAGCGGATCCAGCTTACATTTTTCGTTCTCGGATCCTAAGTTCTTCAGGCTGAGATCGTTATCTCTGTTTTCTGGGTACTGTTTCCAATTCAATCGACGAAAATGGAGGAACCCATTGCCGCATATCAAGTGTTCTTCCGTGGAGCAGGAGCTGAAGCCGCGTCCGAAGCCCCTGCCGTCGAAAATCGAGGTCGATGAGCCGAAGGCGGCGCCTTTGGAAGATACCCAGATCGTGAAACGCAATTCTGGGCTTTGTAGTCAGATTGAGAAGCTGGTTTTGTGTAGTCGGTACCGGGAAGCGCTTGAATTGTTCGAGATTTTGGAGTTTGAAGGTGGGTATGAATTGGCGGGTAGTACGTACGACGCGTTGGTGAGTGCTTGCATTAGTTTGAAATCGATTAGGGGGGTTAAGAGGGTTTCTCGTTACATGATTAGTAATGGGTTTGAATTGGATCAGTATATGAGGAACAGGGTGCTTCTTATGCATGTGAAATGCGGGATGATGGTTGATGCACGTAGATTGTTCGAGGAAATGCGTGAGAGAAACCAGGTTTCTTGGAACACGATAATCAGCGGCCTTGTGGATTCGGGGAATTTCATGGAGGCCTTCCATTTGTTTCAAATTATGTGGCACGAATTTTCTGACGCTGGATCACGGACTCTTGCCACCATGATTCGGGCATCAGCTGGTTTGGCACTCATTTTTGCTGGAAAACAGTTTCATTCCTGTTGTTTGAAGATGGGGCTGGGTTCTGATATTTTCGTGTCTTGTGCGTTGATCGATATGTACAGCAAGTGTGGGAGTATCGAAGATGCTCAATGTGTGTTCGATGAGATGCCGCGGAAGACGACAGTAGGATGGAATACTATCATTGCAGGTTATGCACTTCATGGTTACAGCGAGGAAGCTCTGAGTATGTACTATGACATGCGTGATTCTGGTGTTAAGATGGACCATTTCACATTTTCCATGATCATAAGAATCTGTGCAAGGTTGGCTTCACCGGAACATGCTAAGCAAGCTCATGCAGGTCTAGTTCGTCACGGTTTTGGGTTAGATATAGTGGCGAATACATCACTTGTAGACTTCTATTGCAAATGGGGAAGAATAGAAGACGCCCGTCATGTTTTTGATCAGATGCCCCTCAAGAATGTTATATCTTGGAATGCCTTGATCGCTGGATATGGTAATCATGGTCGGGGTGATGAGGCTGTTGAGATGTTTGAGAAGATGCTTCAGCAAGGAATGGTACCTAACCATGTTACATTTCTTGCTGTATTGTCTGCTTGCAGTCATTCTGGTTTATCAGAACGCGGATGGGAGATTTTTGAAGCAATGAGCAGGGATCACAAGATCAAGCCCCGGGCAATGCATTATGCTTGTATGATTGAATTGCTAGGTCGAGAAGGGCTTTTAGACGAAGCTTATGAACTAATAAGAGACGCTCCCTTTGATCCCACGGCAAATATGTGGGCTGCCCTGCTAACAGCTTGTCGAGTCCATAAGAATTTAGAGCTTGGAAAATTCGCTGCAGAGAAACTTTATGGGATGGAACCTGATAAGCTGAGTAATTATATTGTGCTCTTAAATATTTACAACAGTTCTGGGAAGTTGAAGGAGGCTGCCGGTGTTGTTCAGACTTTAAGAAGAAAGGGTTTGAGAATGCTTCCGGCATGCACTTGGATTGAAATTAAAAAACAGGTAAATATTTTTCGTTATGGAGACAAAAGCCACACTGAAATAAGAGAGATTTACCAGAAAGTGGATGACTTGATGATCAAGATTTCAAAACACGGTTACATCCCTGAGGAGAAGTGTCTACTTCCTGATGTCGATGAACATGAGCAGACGTCGTTTTACCACAGCGAGAAACTGGCCATAGCTTATGGTCTGATCAGTACTTCGGATGGGACACCACTGCAAATTGTGCAGAGTCACCGTATTTGCCGAGACTGCCATTCTGCGGTCATGTTAATTGCTAGGGTTACGGGAAGGGAAATCGTAGTGAGGGACGCCGGCAGATTCCACCATTTCAAGGATGGGAGTTGCTCTTGTGGAAATTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

707

Amino Acids

80.36

Weight (kDa)

7.54

Isoelectric Point (pI)

45.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	300 - 348	1.9e-11	PPR repeat family
PPR	PF01535	304 - 332	2.5e-06	PPR repeat
PPR_2	PF13041	400 - 448	7.5e-13	PPR repeat family
PPR_1	PF12854	401 - 428	6.3e-06	PPR repeat
PPR	PF01535	403 - 432	1.5e-08	PPR repeat
E_motif	PF20431	518 - 580	9.7e-11	E motif
DYW_deaminase	PF14432	616 - 706	4e-35	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005465)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50390
fragaria_vesca	FvH4_6g48290
malus_domestica	MD00G1131200.v1.1 MD09G1052300.v1.1
prunus_persica	Prupe.3G266400_v2.0.a1
pyrus_communis	pycom111g04370 pycom17g04780
rosa_chinensis	RchiOBHm_Chr2g0168271 RchiOBHm_Chr6g0267531
rosa_laevigata	RLG00000013953 RLG00000013992
rosa_multiflora	Rmu_co8459511.1_g000001 Rmu_sc0003354.1_g000005 Rmu_sc0012005.1_g000008
rosa_roxburghii	Rroxscaffold_2G00083250 Rroxscaffold_7G00200650
rosa_rugosa	Rorug02G0532200 Rorug02G0532200 Rorug02G0532300 Rorug06G0033600
rosa_samantha	Rh2AG601300 Rh2BG614500 Rh2BG614600 Rh6AG155000 Rh6BG155600 Rh6DG140900
rosa_wichuraiana	Rw0G012800 Rw2G049930 Rw6G013300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1904
Acc36I	ACCTGC	2 cut(s)	917, 1070
Acc65I	GGTACC	2 cut(s)	339, 1300
AccB1I	GGYRCC	3 cut(s)	259, 339, 1300
AccB7I	CCANNNNNTGG	1 cut(s)	1813
AccBSI	CCGCTC	1 cut(s)	54
AccI	GTMKAC	2 cut(s)	1134, 1870
AccII	CGCG	4 cut(s)	211, 416, 892, 1365
AclWI	GGATC	9 cut(s)	48, 51, 64, 77, 90, 510, 709, 1404, 1499
AcoI	YGGCCR	1 cut(s)	1926
AcsI	RAATTY	4 cut(s)	643, 686, 1558, 1574
AcuI	CTGAAG	3 cut(s)	79, 224, 1271
AcyI	GRCGYC	4 cut(s)	260, 1167, 1901, 2064
AfaI	GTAC	8 cut(s)	128, 341, 406, 410, 839, 971, 1302, 1951
AfeI	AGCGCT	1 cut(s)	351
AfiI	CCNNNNNNNGG	4 cut(s)	726, 1813, 2014, 2086
AflIII	ACRYGT	1 cut(s)	414
AjnI	CCWGG	1 cut(s)	597
AloI	GAACNNNNNNTCC	2 cut(s)	74, 106
Alw21I	GWGCWC	1 cut(s)	1635
Alw26I	GTCTC	3 cut(s)	1485, 1767, 1995
AlwI	GGATC	9 cut(s)	48, 51, 64, 77, 90, 510, 709, 1404, 1499
AlwNI	CAGNNNCTG	1 cut(s)	202
Ama87I	CYCGRG	1 cut(s)	1413
Aor51HI	AGCGCT	1 cut(s)	351
AoxI	GGCC	3 cut(s)	625, 654, 1926
ApeKI	GCWGC	3 cut(s)	1526, 1580, 1673
ApoI	RAATTY	4 cut(s)	643, 686, 1558, 1574
ArsI	GACNNNNNNTTYG	2 cut(s)	1484, 1516
Asp718I	GGTACC	2 cut(s)	339, 1300
AspLEI	GCGC	3 cut(s)	21, 262, 352
AspS9I	GGNCC	1 cut(s)	1003
AsuC2I	CCSGG	3 cut(s)	344, 1414, 1415
AsuHPI	GGTGA	4 cut(s)	433, 1044, 1265, 1979
AvaI	CYCGRG	1 cut(s)	1413
AvaII	GGWCC	1 cut(s)	1003
AxyI	CCTNAGG	1 cut(s)	1857
BalI	TGGCCA	1 cut(s)	1928
BamHI	GGATCC	2 cut(s)	56, 82
BanI	GGYRCC	3 cut(s)	259, 339, 1300
BbsI	GAAGAC	2 cut(s)	902, 1170
Bbv12I	GWGCWC	1 cut(s)	1635
BbvI	GCAGC	3 cut(s)	1513, 1567, 1660
BccI	CCATC	8 cut(s)	547, 784, 903, 994, 1362, 1594, 1952, 2084
BceAI	ACGGC	2 cut(s)	211, 1527
BcgI	CGANNNNNNTGC	4 cut(s)	14, 48, 205, 239
BciT130I	CCWGG	1 cut(s)	599
BclI	TGATCA	4 cut(s)	1023, 1183, 1827, 1944
BcnI	CCSGG	3 cut(s)	344, 1414, 1415
BcoDI	GTCTC	3 cut(s)	1485, 1767, 1995
BfaI	CTAG	3 cut(s)	1085, 1448, 2031
BfmI	CTRYAG	1 cut(s)	1581
BfoI	RGCGCY	2 cut(s)	263, 353
BfuAI	ACCTGC	2 cut(s)	917, 1070
BisI	GCNGC	8 cut(s)	170, 209, 258, 625, 890, 1527, 1581, 1674
BlpI	GCTNAGC	1 cut(s)	1065
BlsI	GCNGC	8 cut(s)	171, 210, 259, 626, 891, 1528, 1582, 1675
BmcAI	AGTACT	1 cut(s)	1951
Bme1390I	CCNGG	4 cut(s)	344, 599, 1414, 1415
Bme18I	GGWCC	1 cut(s)	1003
BmeT110I	CYCGRG	1 cut(s)	1413
BmgT120I	GGNCC	1 cut(s)	1003
BmiI	GGNNCC	7 cut(s)	58, 84, 161, 261, 341, 1302, 1605
BmrFI	CCNGG	4 cut(s)	344, 599, 1414, 1415
BmsI	GCATC	6 cut(s)	550, 740, 853, 876, 1179, 1272
BoxI	GACNNNNGTC	1 cut(s)	1170
BpiI	GAAGAC	2 cut(s)	902, 1170
BplI	GAGNNNNNCTC	2 cut(s)	454, 486
Bpu1102I	GCTNAGC	1 cut(s)	1065
BpuEI	CTTGAG	1 cut(s)	1181
BpuMI	CCSGG	3 cut(s)	344, 1414, 1415
Bsa29I	ATCGAT	2 cut(s)	446, 831
BsaAI	YACGTR	2 cut(s)	408, 566
BsaBI	GATNNNNATC	1 cut(s)	109
BsaHI	GRCGYC	4 cut(s)	260, 1167, 1901, 2064
BsaJI	CCNNGG	5 cut(s)	189, 890, 1412, 1413, 1509
BsaWI	WCCGGW	1 cut(s)	1054
Bsc4I	CCNNNNNNNGG	4 cut(s)	726, 1813, 2014, 2086
Bse118I	RCCGGY	2 cut(s)	1676, 2066
Bse1I	ACTGG	2 cut(s)	1929, 2120
Bse21I	CCTNAGG	1 cut(s)	1857
Bse3DI	GCAATG	4 cut(s)	164, 921, 1392, 1425
Bse8I	GATNNNNATC	1 cut(s)	109
BseBI	CCWGG	1 cut(s)	599
BseCI	ATCGAT	2 cut(s)	446, 831
BseDI	CCNNGG	5 cut(s)	189, 890, 1412, 1413, 1509
BseGI	GGATG	8 cut(s)	555, 914, 1373, 1605, 1822, 1851, 1963, 2095
BseJI	GATNNNNATC	1 cut(s)	109
BseLI	CCNNNNNNNGG	4 cut(s)	726, 1813, 2014, 2086
BseMI	GCAATG	4 cut(s)	164, 921, 1392, 1425
BseMII	CTCAG	4 cut(s)	92, 953, 1607, 1848
BseNI	ACTGG	2 cut(s)	1929, 2120
BseRI	GAGGAG	1 cut(s)	1874
BseXI	GCAGC	3 cut(s)	1513, 1567, 1660
BseYI	CCCAGC	1 cut(s)	796
BsgI	GTGCAG	1 cut(s)	2000
Bsh1236I	CGCG	4 cut(s)	211, 416, 892, 1365
BshFI	GGCC	3 cut(s)	627, 656, 1928
BshNI	GGYRCC	3 cut(s)	259, 339, 1300
BshVI	ATCGAT	2 cut(s)	446, 831
BsiHKAI	GWGCWC	1 cut(s)	1635
BsiHKCI	CYCGRG	1 cut(s)	1413
BsiSI	CCGG	6 cut(s)	343, 1055, 1414, 1677, 1721, 2067
BsiWI	CGTACG	1 cut(s)	408
BslFI	GGGAC	2 cut(s)	1975, 2075
BslI	CCNNNNNNNGG	4 cut(s)	726, 1813, 2014, 2086
BsmAI	GTCTC	3 cut(s)	1485, 1767, 1995
BsmBI	CGTCTC	1 cut(s)	1485
BsmFI	GGGAC	2 cut(s)	1975, 2075
BsmI	GAATGC	2 cut(s)	1222, 1719
BsnI	GGCC	3 cut(s)	627, 656, 1928
BsoBI	CYCGRG	1 cut(s)	1413
Bsp1286I	GDGCHC	1 cut(s)	1635
Bsp1407I	TGTACA	1 cut(s)	837
Bsp1720I	GCTNAGC	1 cut(s)	1065
BspANI	GGCC	3 cut(s)	627, 656, 1928
BspCNI	CTCAG	4 cut(s)	93, 954, 1608, 1849
BspDI	ATCGAT	2 cut(s)	446, 831
BspFNI	CGCG	4 cut(s)	211, 416, 892, 1365
BspLI	GGNNCC	7 cut(s)	58, 84, 161, 261, 341, 1302, 1605
BspMAI	CTGCAG	1 cut(s)	1585
BspMI	ACCTGC	2 cut(s)	917, 1070
BspPI	GGATC	9 cut(s)	48, 51, 64, 77, 90, 510, 709, 1404, 1499
BspT107I	GGYRCC	3 cut(s)	259, 339, 1300
BsrBI	CCGCTC	1 cut(s)	54
BsrDI	GCAATG	4 cut(s)	164, 921, 1392, 1425
BsrFI	RCCGGY	2 cut(s)	1676, 2066
BsrGI	TGTACA	1 cut(s)	837
BsrI	ACTGG	2 cut(s)	1929, 2120
BssAI	RCCGGY	2 cut(s)	1676, 2066
BssECI	CCNNGG	5 cut(s)	189, 890, 1412, 1413, 1509
BssNI	GRCGYC	4 cut(s)	260, 1167, 1901, 2064
Bst2UI	CCWGG	1 cut(s)	599
Bst4CI	ACNGT	7 cut(s)	131, 768, 904, 1097, 1652, 1847, 1991
BstACI	GRCGYC	4 cut(s)	260, 1167, 1901, 2064
BstAPI	GCANNNNNTGC	2 cut(s)	932, 1978
BstAUI	TGTACA	1 cut(s)	837
BstBAI	YACGTR	2 cut(s)	408, 566
BstC8I	GCNNGC	5 cut(s)	430, 1071, 1339, 1726, 2068
BstDEI	CTNAG	6 cut(s)	87, 101, 962, 1065, 1616, 1857
BstDSI	CCRYGG	3 cut(s)	189, 890, 1509
BstF5I	GGATG	8 cut(s)	555, 914, 1373, 1605, 1822, 1851, 1963, 2095
BstFNI	CGCG	4 cut(s)	211, 416, 892, 1365
BstH2I	RGCGCY	2 cut(s)	263, 353
BstHHI	GCGC	3 cut(s)	21, 262, 352
BstMAI	GTCTC	3 cut(s)	1485, 1767, 1995
BstNI	CCWGG	1 cut(s)	599
BstNSI	RCATGY	4 cut(s)	539, 982, 1064, 1728
BstPAI	GACNNNNGTC	1 cut(s)	1170
BstSCI	CCNGG	4 cut(s)	342, 597, 1412, 1413
BstSFI	CTRYAG	1 cut(s)	1581
BstSNI	TACGTA	1 cut(s)	408
BstUI	CGCG	4 cut(s)	211, 416, 892, 1365
BstV1I	GCAGC	3 cut(s)	1513, 1567, 1660
BstV2I	GAAGAC	2 cut(s)	902, 1170
BstX2I	RGATCY	3 cut(s)	6, 56, 82
BstYI	RGATCY	3 cut(s)	6, 56, 82
Bsu15I	ATCGAT	2 cut(s)	446, 831
Bsu36I	CCTNAGG	1 cut(s)	1857
BsuRI	GGCC	3 cut(s)	627, 656, 1928
BsuTUI	ATCGAT	2 cut(s)	446, 831
BtgI	CCRYGG	3 cut(s)	189, 890, 1509
BtsCI	GGATG	8 cut(s)	555, 914, 1373, 1605, 1822, 1851, 1963, 2095
BtsI	GCAGTG	1 cut(s)	1967
BtsIMutI	CAGTG	2 cut(s)	1785, 1967
BveI	ACCTGC	2 cut(s)	917, 1070
Cac8I	GCNNGC	5 cut(s)	430, 1071, 1339, 1726, 2068
CaiI	CAGNNNCTG	1 cut(s)	202
CfoI	GCGC	3 cut(s)	21, 262, 352
Cfr10I	RCCGGY	2 cut(s)	1676, 2066
Cfr13I	GGNCC	1 cut(s)	1003
Cfr42I	CCGCGG	1 cut(s)	893
Cfr9I	CCCGGG	1 cut(s)	1413
ClaI	ATCGAT	2 cut(s)	446, 831
CseI	GACGC	6 cut(s)	200, 422, 704, 1175, 1502, 2072
CsiI	ACCWGGT	1 cut(s)	597
Csp6I	GTAC	8 cut(s)	127, 340, 405, 409, 838, 970, 1301, 1950
CspCI	CAANNNNNGTGG	2 cut(s)	659, 694
CviQI	GTAC	8 cut(s)	127, 340, 405, 409, 838, 970, 1301, 1950
DdeI	CTNAG	6 cut(s)	87, 101, 962, 1065, 1616, 1857
DinI	GGCGCC	1 cut(s)	261
EaeI	YGGCCR	1 cut(s)	1926
Eco105I	TACGTA	1 cut(s)	408
Eco147I	AGGCCT	1 cut(s)	656
Eco47I	GGWCC	1 cut(s)	1003
Eco47III	AGCGCT	1 cut(s)	351
Eco57I	CTGAAG	3 cut(s)	79, 224, 1271
Eco81I	CCTNAGG	1 cut(s)	1857
Eco88I	CYCGRG	1 cut(s)	1413
EcoRII	CCWGG	1 cut(s)	597
EcoT22I	ATGCAT	2 cut(s)	537, 1425
EgeI	GGCGCC	1 cut(s)	261
EheI	GGCGCC	1 cut(s)	261
Esp3I	CGTCTC	1 cut(s)	1485
FalI	AAGNNNNNCTT	2 cut(s)	1033, 1065
FaqI	GGGAC	2 cut(s)	1975, 2075
FauI	CCCGC	2 cut(s)	391, 539
FbaI	TGATCA	4 cut(s)	1023, 1183, 1827, 1944
FblI	GTMKAC	2 cut(s)	1134, 1870
Fnu4HI	GCNGC	8 cut(s)	170, 209, 258, 625, 890, 1527, 1581, 1674
FokI	GGATG	8 cut(s)	562, 921, 1380, 1612, 1829, 1838, 1970, 2102
Fsp4HI	GCNGC	8 cut(s)	170, 209, 258, 625, 890, 1527, 1581, 1674
FspBI	CTAG	3 cut(s)	1085, 1448, 2031
GlaI	GCGC	3 cut(s)	20, 261, 351
GluI	GCNGC	8 cut(s)	170, 209, 258, 625, 890, 1527, 1581, 1674
GsaI	CCCAGC	1 cut(s)	800
HaeII	RGCGCY	2 cut(s)	263, 353
HaeIII	GGCC	3 cut(s)	627, 656, 1928
HapII	CCGG	6 cut(s)	343, 1055, 1414, 1677, 1721, 2067
HgaI	GACGC	6 cut(s)	200, 422, 704, 1175, 1502, 2072
HhaI	GCGC	3 cut(s)	21, 262, 352
Hin1I	GRCGYC	4 cut(s)	260, 1167, 1901, 2064
Hin6I	GCGC	3 cut(s)	19, 260, 350
HinP1I	GCGC	3 cut(s)	19, 260, 350
HindIII	AAGCTT	1 cut(s)	1473
HinfI	GANTC	8 cut(s)	635, 709, 724, 986, 1032, 1548, 1984, 2073
HpaII	CCGG	6 cut(s)	343, 1055, 1414, 1677, 1721, 2067
HphI	GGTGA	4 cut(s)	433, 1044, 1265, 1979
Hpy166II	GTNNAC	2 cut(s)	1135, 1871
Hpy188III	TCNNGA	7 cut(s)	49, 283, 364, 1198, 1454, 1831, 1877
Hpy8I	GTNNAC	2 cut(s)	1135, 1871
Hpy99I	CGWCG	4 cut(s)	150, 232, 416, 1906
HpyAV	CCTTC	6 cut(s)	247, 374, 667, 1451, 1660, 2037
HpyCH4III	ACNGT	7 cut(s)	131, 768, 904, 1097, 1652, 1847, 1991
HpyCH4IV	ACGT	3 cut(s)	407, 565, 1901
HpyF3I	CTNAG	6 cut(s)	87, 101, 962, 1065, 1616, 1857
HpySE526I	ACGT	3 cut(s)	407, 565, 1901
Hsp92I	GRCGYC	4 cut(s)	260, 1167, 1901, 2064
HspAI	GCGC	3 cut(s)	19, 260, 350
KasI	GGCGCC	1 cut(s)	259
KpnI	GGTACC	2 cut(s)	343, 1304
KroI	GCCGGC	1 cut(s)	2066
KroNI	GCCGGC	1 cut(s)	2068
Ksp22I	TGATCA	4 cut(s)	1023, 1183, 1827, 1944
KspI	CCGCGG	1 cut(s)	893
LmnI	GCTCC	3 cut(s)	193, 199, 1501
Lsp1109I	GCAGC	3 cut(s)	1513, 1567, 1660
LweI	GCATC	6 cut(s)	550, 740, 853, 876, 1179, 1272
MabI	ACCWGGT	1 cut(s)	597
MaeI	CTAG	3 cut(s)	1085, 1448, 2031
MaeII	ACGT	3 cut(s)	407, 565, 1901
MaeIII	GTNAC	7 cut(s)	473, 944, 1091, 1312, 1847, 1985, 2035
MbiI	CCGCTC	1 cut(s)	54
MflI	RGATCY	3 cut(s)	6, 56, 82
MhlI	GDGCHC	1 cut(s)	1635
MlsI	TGGCCA	1 cut(s)	1928
MluI	ACGCGT	1 cut(s)	414
MluNI	TGGCCA	1 cut(s)	1928
Mly113I	GGCGCC	1 cut(s)	260
MlyI	GAGTC	3 cut(s)	703, 1557, 1993
MmeI	TCCRAC	1 cut(s)	18
Mox20I	TGGCCA	1 cut(s)	1928
Mph1103I	ATGCAT	2 cut(s)	537, 1425
MroNI	GCCGGC	1 cut(s)	2066
MscI	TGGCCA	1 cut(s)	1928
MseI	TTAA	6 cut(s)	459, 996, 1637, 1694, 1743, 2024
Msp20I	TGGCCA	1 cut(s)	1928
MspA1I	CMGCKG	3 cut(s)	624, 737, 892
MspI	CCGG	6 cut(s)	343, 1055, 1414, 1677, 1721, 2067
MspR9I	CCNGG	4 cut(s)	344, 599, 1414, 1415
Mva1269I	GAATGC	2 cut(s)	1222, 1719
MvaI	CCWGG	1 cut(s)	599
MvnI	CGCG	4 cut(s)	211, 416, 892, 1365
NaeI	GCCGGC	1 cut(s)	2068
NarI	GGCGCC	1 cut(s)	260
NciI	CCSGG	3 cut(s)	344, 1414, 1415
NgoMIV	GCCGGC	1 cut(s)	2066
NlaIV	GGNNCC	7 cut(s)	58, 84, 161, 261, 341, 1302, 1605
NmeAIII	GCCGAG	1 cut(s)	2024
NmuCI	GTSAC	2 cut(s)	1091, 1985
NsiI	ATGCAT	2 cut(s)	537, 1425
NspI	RCATGY	4 cut(s)	539, 982, 1064, 1728
PaeI	GCATGC	1 cut(s)	1728
PceI	AGGCCT	1 cut(s)	656
PcsI	WCGNNNNNNNCGW	1 cut(s)	413
PctI	GAATGC	2 cut(s)	1222, 1719
PdiI	GCCGGC	1 cut(s)	2068
PfeI	GAWTC	5 cut(s)	635, 724, 986, 1032, 2073
Pfl23II	CGTACG	1 cut(s)	408
PflMI	CCANNNNNTGG	1 cut(s)	1813
PkrI	GCNGC	8 cut(s)	171, 210, 259, 626, 891, 1528, 1582, 1675
PleI	GAGTC	3 cut(s)	703, 1556, 1992
PluTI	GGCGCC	1 cut(s)	263
PpsI	GAGTC	3 cut(s)	703, 1556, 1992
Ppu21I	YACGTR	2 cut(s)	408, 566
PshAI	GACNNNNGTC	1 cut(s)	1170
Psp6I	CCWGG	1 cut(s)	597
PspFI	CCCAGC	1 cut(s)	796
PspGI	CCWGG	1 cut(s)	597
PspLI	CGTACG	1 cut(s)	408
PspN4I	GGNNCC	7 cut(s)	58, 84, 161, 261, 341, 1302, 1605
PspPI	GGNCC	1 cut(s)	1003
PstI	CTGCAG	1 cut(s)	1585
PstNI	CAGNNNCTG	1 cut(s)	202
PsuI	RGATCY	3 cut(s)	6, 56, 82
PvuII	CAGCTG	1 cut(s)	737
RsaI	GTAC	8 cut(s)	128, 341, 406, 410, 839, 971, 1302, 1951
RsaNI	GTAC	8 cut(s)	127, 340, 405, 409, 838, 970, 1301, 1950
SacII	CCGCGG	1 cut(s)	893
SaqAI	TTAA	6 cut(s)	459, 996, 1637, 1694, 1743, 2024
SatI	GCNGC	8 cut(s)	170, 209, 258, 625, 890, 1527, 1581, 1674
Sau96I	GGNCC	1 cut(s)	1003
ScaI	AGTACT	1 cut(s)	1951
SchI	GAGTC	3 cut(s)	703, 1557, 1993
ScrFI	CCNGG	4 cut(s)	344, 599, 1414, 1415
SduI	GDGCHC	1 cut(s)	1635
SexAI	ACCWGGT	1 cut(s)	597
SfaNI	GCATC	6 cut(s)	550, 740, 853, 876, 1179, 1272
SfcI	CTRYAG	1 cut(s)	1581
SfoI	GGCGCC	1 cut(s)	261
Sfr303I	CCGCGG	1 cut(s)	893
SgrBI	CCGCGG	1 cut(s)	893
SinI	GGWCC	1 cut(s)	1003
SmaI	CCCGGG	1 cut(s)	1415
SmlI	CTYRAG	1 cut(s)	1196
SmoI	CTYRAG	1 cut(s)	1196
SnaBI	TACGTA	1 cut(s)	408
SphI	GCATGC	1 cut(s)	1728
SseBI	AGGCCT	1 cut(s)	656
SspDI	GGCGCC	1 cut(s)	259
SspI	AATATT	3 cut(s)	31, 1642, 1759
SspMI	CTAG	3 cut(s)	1085, 1448, 2031
StuI	AGGCCT	1 cut(s)	656
StyD4I	CCNGG	4 cut(s)	342, 597, 1412, 1413
TaaI	ACNGT	7 cut(s)	131, 768, 904, 1097, 1652, 1847, 1991
TaiI	ACGT	3 cut(s)	410, 568, 1904
TatI	WGTACW	3 cut(s)	837, 969, 1949
TauI	GCSGC	5 cut(s)	172, 211, 260, 627, 892
TfiI	GAWTC	5 cut(s)	635, 724, 986, 1032, 2073
Tru1I	TTAA	6 cut(s)	459, 996, 1637, 1694, 1743, 2024
Tru9I	TTAA	6 cut(s)	459, 996, 1637, 1694, 1743, 2024
TscAI	CASTG	2 cut(s)	1792, 1974
TseFI	GTSAC	2 cut(s)	1091, 1985
TseI	GCWGC	3 cut(s)	1526, 1580, 1673
Tsp45I	GTSAC	2 cut(s)	1091, 1985
TspDTI	ATGAA	6 cut(s)	405, 637, 761, 929, 1494, 1902
TspGWI	ACGGA	2 cut(s)	178, 721
TspMI	CCCGGG	1 cut(s)	1413
TspRI	CASTG	2 cut(s)	1792, 1974
Van91I	CCANNNNNTGG	1 cut(s)	1813
VpaK11BI	GGWCC	1 cut(s)	1003
XapI	RAATTY	4 cut(s)	643, 686, 1558, 1574
XceI	RCATGY	4 cut(s)	539, 982, 1064, 1728
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2087
XmaI	CCCGGG	1 cut(s)	1413
XmiI	GTMKAC	2 cut(s)	1134, 1870
XspI	CTAG	3 cut(s)	1085, 1448, 2031
ZraI	GACGTC	1 cut(s)	1902
ZrmI	AGTACT	1 cut(s)	1951
Zsp2I	ATGCAT	2 cut(s)	537, 1425

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.