pycom17g08010

H ACA ribonucleoprotein complex non-core subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0012463
Physical Location & Seq
Forward (+)
5997833 .. 6000645
2813 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2028 bp
ATGGCGGAAACAGGGCAGTTTAAGGCTGAGGCGGTTGACGCAGAGTATATTGGAGGTGGGTTCGAGCCGGCGGGTGATGGGTCTGTGCCGATTGATTGTGGGTCTGGTTGTGCGGTGAAGGTGGAGGGTCAAATGTTGGAGAATTCGGGTTGTTTGATTGCGGAAGGGTTGGGGAAGGTTAATTTGCTTGGAGGGTGTGAAGAAAGTTCGGTTCTTGATGGTGGGAATGGTATGAAGAGTGAAGTAGTGAGTTGTGATACCGGGGAAATGAAACCGGTGAGTAATGAGAATGGGATGGGGAGTGAAATGGTGAGTGGGAATAGTGGGAAGAGTGGAGCAGGGAATGGTGAGTCCGAGAGTGAAAGCTCGGAGTCTGAGAGTGAGAGTTCGTTCTTGTCGTCATCCTCGTCATCATCTGAGAGTAGTAACTCTAGTGATGATGAAGAGGAGGAAAATAGGAAGGGGAAGATGAATGTGGAGGTGCAGGAGAGCAACGAGGGTGGTGAAATGGAAGAAGGTGAAATAAGGGATGCTGATGGAGGGGAGGAGGAAGATAAGATATTCGGTATGGATAATGAAAGTGAGGATGATGATGATGAAGATGAAATGGTTGCTTGGGCCGATGCTGAAACTTTTGACGAGGGAGACGGCGATGAGGATGATGTTGGAGATCTGAAAGGACCCATTAGGTCCAAGAATGAGCTTGAGGTGCTTCCCCCAATTCCTCCAGTGGAGGTGACTTTGCAACCACATCATCAGATGCAACCTGTGGGAGTTGTCTTATCGGTTCTTGGTACCCAAGTCATCGTAGAAGGGGTTGAGAAGCACAACCCTCTAAACGAGGGTTCGATTTTGTGGGTAACTGAAAGTAGATCTCCGTTGGGGTTGATAGATGAAATCTTTGGACCTGTCATACAACCTTACTATGTGGTGAGATACAATTCAGAAAGTGAAATACCTAGTGGAATACAAACAGGAATTTTGGTCTCTTTCGTTCCGGAGTTTGCGGATCATGTGCTTAATAACAAGGATGTTTACCGAAAGGGTTATGATGCATCTGGTGCAAATGATGAAGAGATATCAGATGAGGCAGAATTTTCAGATGATGAGAAAGAGGCTGAATACAGGAGGATGCAAAAAATGTCAAAGAGGGGAATGAAGGACCAAAATGTTGGCAATAAGAAAAACAACAGAAAATGGGGTAAAAATAAGCCGGGACCCTGGAAAAATGGTCAACCTTCAACGCAGCAAACACCAATGGATGCGGTTAAGCAGCCTCCCAATCAACACCACCATCCTTTTTCTCCAGGTGTACCATCTTCTGCTGCAGTATCACAAAAATTGGTTAGTCGGACTGGATTAGTTCCACCATTTCCAGCTCCTACACAGGTCGCTGGTATCAACACAACTTCAAATGGAGGTTGGGCAAATGGAGTGCCGTTTCAGCCACAAAACACATCCTTCCCTAACGGATTTCCAAACAATAGTTTTCCAAGTCTTCTACAGTATAATCCTCAATATCCTTATCAAATGTCTGTTCCGAACAGAATGCCGTTCTATCAGCAGGCTGGTGCTGTCTTACCGGGCCAACAGTTGAACGCCTTTGCAGGACTTGCGTATTCACAAGAGATGATGGGTCAACATGGGTTCAATCAAACAGCCTTTGGGTTAGGTTTACAGGGCCAACCCATACCAGGCCAACAATTCAATGCCTTTGCAGAACCCAGGGTGGGTCAACTTGGTTTTAACCAAAACACGTTCGGGATGGGATTACAGGGCCAACCTTCTCACCCAATCTTCAATGCAGATCAAGGAATGCCATCAAATGGATTACATTCTGAACAAAACCATAATTTGCCACAATCCGTTGCAAATGCAGGCAATGTGGACAGCCAGCAATGTAATCAGGGCGCACCTTCTAATCATGGAAGGAGACCCTCCCATAGAGGGGGTCATAATTTTGGGAGACCCTCCCATAGAGGGGGTCGTAATTTTGGAAGGGGAAGAGGCAGGCAGCAATCGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000154 GO:0000454 GO:0000491 GO:0000493 GO:0001522 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005732 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010608 GO:0010638 GO:0016043 GO:0016070 GO:0016072 GO:0016074 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0031118 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031330 GO:0032204 GO:0032206 GO:0032210 GO:0032212 GO:0032991 GO:0033043 GO:0033044 GO:0034470 GO:0034622 GO:0034641 GO:0034660 GO:0042254 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043487 GO:0043489 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0045934 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0051052 GO:0051054 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051338 GO:0051347 GO:0051972 GO:0051973 GO:0060255 GO:0065003 GO:0065007 GO:0065008 GO:0065009 GO:0070034 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0090669 GO:0097159 GO:1901360 GO:1901363 GO:1902369 GO:1904356 GO:1904358 GO:1905323 GO:1990904 GO:2000112 GO:2000278 GO:2000573 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Gar1

Protein Analysis

676

Amino Acids

72.5

Weight (kDa)

4.6

Isoelectric Point (pI)

52.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gar1 PF04410 255 - 334 6.6e-16 Gar1/Naf1 RNA binding region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012463)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03530
fragaria_vesca FvH4_6g44910
malus_domestica MD09G1092000.v1.1 MD17G1081900.v1.1
prunus_persica Prupe.3G233000_v2.0.a1
pyrus_communis pycom09g01750 pycom17g08010
rosa_chinensis RchiOBHm_Chr2g0162091
rosa_laevigata RLG00000021322
rosa_multiflora Rmu_co8199028.1_g000001 Rmu_co8200688.1_g000001 Rmu_sc0004020.1_g000037
rosa_roxburghii Rroxscaffold_2G00088310
rosa_rugosa Rorug02G0494600
rosa_samantha Rh2AG560800 Rh2BG574100 Rh2CG544400 Rh2DG584100
rosa_wichuraiana Rw2G046450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 794
AccB1I GGYRCC 1 cut(s) 794
AccB7I CCANNNNNTGG 1 cut(s) 1826
AccIII TCCGGA 1 cut(s) 997
AciI CCGC 7 cut(s) 5, 32, 71, 113, 161, 1007, 1265
AclWI GGATC 1 cut(s) 1017
AcsI RAATTY 3 cut(s) 142, 978, 1094
AfaI GTAC 2 cut(s) 796, 1314
AfiI CCNNNNNNNGG 7 cut(s) 1694, 1730, 1826, 1947, 1948, 1980, 1981
AflIII ACRYGT 1 cut(s) 1755
AgeI ACCGGT 1 cut(s) 274
AgsI TTSAA 6 cut(s) 1242, 1413, 1597, 1651, 1708, 1801
AjnI CCWGG 4 cut(s) 1220, 1306, 1693, 1724
AluBI AGCT 3 cut(s) 366, 703, 1379
AluI AGCT 3 cut(s) 366, 703, 1379
Alw26I GTCTC 4 cut(s) 639, 991, 1927, 1960
AlwI GGATC 1 cut(s) 1017
Aor13HI TCCGGA 1 cut(s) 997
AoxI GGCC 5 cut(s) 618, 1585, 1681, 1696, 1777
ApeKI GCWGC 4 cut(s) 1246, 1273, 1325, 2014
ApoI RAATTY 3 cut(s) 142, 978, 1094
AsiGI ACCGGT 1 cut(s) 274
Asp718I GGTACC 1 cut(s) 794
AspLEI GCGC 1 cut(s) 1913
AspS9I GGNCC 9 cut(s) 618, 680, 690, 905, 1162, 1217, 1585, 1681, 1777
AsuC2I CCSGG 3 cut(s) 262, 1215, 1584
AvaII GGWCC 5 cut(s) 680, 690, 905, 1162, 1217
BaeI ACNNNNGTAYC 2 cut(s) 786, 819
BanI GGYRCC 1 cut(s) 794
BbsI GAAGAC 1 cut(s) 1490
BbvCI CCTCAGC 1 cut(s) 27
BbvI GCAGC 3 cut(s) 1258, 1285, 1312
BccI CCATC 9 cut(s) 71, 212, 289, 530, 1302, 1324, 1627, 1759, 1828
BceAI ACGGC 3 cut(s) 664, 1423, 1537
BcgI CGANNNNNNTGC 2 cut(s) 1531, 1565
BciT130I CCWGG 4 cut(s) 1222, 1308, 1695, 1726
BcnI CCSGG 3 cut(s) 262, 1215, 1584
BcoDI GTCTC 4 cut(s) 639, 991, 1927, 1960
BfaI CTAG 2 cut(s) 432, 960
BfmI CTRYAG 2 cut(s) 1326, 1502
BglII AGATCT 2 cut(s) 670, 872
BisI GCNGC 4 cut(s) 1247, 1274, 1326, 2015
BlsI GCNGC 4 cut(s) 1248, 1275, 1327, 2016
Bme1390I CCNGG 7 cut(s) 262, 1215, 1222, 1308, 1584, 1695, 1726
Bme18I GGWCC 5 cut(s) 680, 690, 905, 1162, 1217
BmgT120I GGNCC 9 cut(s) 618, 680, 690, 905, 1162, 1217, 1585, 1681, 1777
BmiI GGNNCC 4 cut(s) 682, 796, 1218, 1219
BmrFI CCNGG 7 cut(s) 262, 1215, 1222, 1308, 1584, 1695, 1726
BmsI GCATC 7 cut(s) 520, 613, 750, 1042, 1064, 1122, 1252
BpiI GAAGAC 1 cut(s) 1490
BpmI CTGGAG 2 cut(s) 711, 1290
Bpu10I CCTNAGC 1 cut(s) 27
BpuEI CTTGAG 1 cut(s) 725
BpuMI CCSGG 3 cut(s) 262, 1215, 1584
BsaI GGTCTC 3 cut(s) 991, 1927, 1960
BsaJI CCNNGG 4 cut(s) 261, 1220, 1724, 1725
BsaWI WCCGGW 2 cut(s) 274, 997
Bsc4I CCNNNNNNNGG 7 cut(s) 1694, 1730, 1826, 1947, 1948, 1980, 1981
Bse118I RCCGGY 2 cut(s) 67, 274
Bse1I ACTGG 2 cut(s) 728, 1360
Bse3DI GCAATG 2 cut(s) 1888, 1904
BseAI TCCGGA 1 cut(s) 997
BseBI CCWGG 4 cut(s) 1222, 1308, 1695, 1726
BseDI CCNNGG 4 cut(s) 261, 1220, 1724, 1725
BseLI CCNNNNNNNGG 7 cut(s) 1694, 1730, 1826, 1947, 1948, 1980, 1981
BseMI GCAATG 2 cut(s) 1888, 1904
BseMII CTCAG 3 cut(s) 18, 366, 408
BseNI ACTGG 2 cut(s) 728, 1360
BseRI GAGGAG 2 cut(s) 461, 560
BseXI GCAGC 3 cut(s) 1258, 1285, 1312
BsgI GTGCAG 1 cut(s) 503
BshFI GGCC 5 cut(s) 620, 1587, 1683, 1698, 1779
BshNI GGYRCC 1 cut(s) 794
BshTI ACCGGT 1 cut(s) 274
BsiSI CCGG 6 cut(s) 68, 261, 275, 998, 1214, 1583
BslFI GGGAC 1 cut(s) 1230
BslI CCNNNNNNNGG 7 cut(s) 1694, 1730, 1826, 1947, 1948, 1980, 1981
BsmAI GTCTC 4 cut(s) 639, 991, 1927, 1960
BsmBI CGTCTC 1 cut(s) 639
BsmFI GGGAC 1 cut(s) 1230
BsmI GAATGC 2 cut(s) 1554, 1821
BsnI GGCC 5 cut(s) 620, 1587, 1683, 1698, 1779
Bso31I GGTCTC 3 cut(s) 991, 1927, 1960
Bsp13I TCCGGA 1 cut(s) 997
Bsp143I GATC 4 cut(s) 670, 872, 1009, 1807
BspACI CCGC 7 cut(s) 5, 32, 71, 113, 161, 1007, 1265
BspANI GGCC 5 cut(s) 620, 1587, 1683, 1698, 1779
BspCNI CTCAG 3 cut(s) 19, 367, 409
BspEI TCCGGA 1 cut(s) 997
BspLI GGNNCC 4 cut(s) 682, 796, 1218, 1219
BspMAI CTGCAG 1 cut(s) 1330
BspPI GGATC 1 cut(s) 1017
BspT107I GGYRCC 1 cut(s) 794
BspTNI GGTCTC 3 cut(s) 991, 1927, 1960
BsrDI GCAATG 2 cut(s) 1888, 1904
BsrFI RCCGGY 2 cut(s) 67, 274
BsrI ACTGG 2 cut(s) 728, 1360
BssAI RCCGGY 2 cut(s) 67, 274
BssECI CCNNGG 4 cut(s) 261, 1220, 1724, 1725
BssMI GATC 4 cut(s) 670, 872, 1009, 1807
Bst2UI CCWGG 4 cut(s) 1222, 1308, 1695, 1726
Bst4CI ACNGT 2 cut(s) 1506, 1593
Bst6I CTCTTC 5 cut(s) 230, 323, 438, 1068, 1999
BstAPI GCANNNNNTGC 2 cut(s) 1061, 1613
BstC8I GCNNGC 5 cut(s) 69, 1566, 1879, 1895, 2012
BstDEI CTNAG 3 cut(s) 27, 375, 417
BstHHI GCGC 1 cut(s) 1913
BstKTI GATC 4 cut(s) 673, 875, 1012, 1810
BstMAI GTCTC 4 cut(s) 639, 991, 1927, 1960
BstMBI GATC 4 cut(s) 670, 872, 1009, 1807
BstMWI GCNNNNNNNGC 5 cut(s) 38, 709, 1061, 1444, 1613
BstNI CCWGG 4 cut(s) 1222, 1308, 1695, 1726
BstSCI CCNGG 7 cut(s) 260, 1213, 1220, 1306, 1582, 1693, 1724
BstSFI CTRYAG 2 cut(s) 1326, 1502
BstV1I GCAGC 3 cut(s) 1258, 1285, 1312
BstV2I GAAGAC 1 cut(s) 1490
BstX2I RGATCY 2 cut(s) 670, 872
BstXI CCANNNNNNTGG 1 cut(s) 1172
BstYI RGATCY 2 cut(s) 670, 872
BsuRI GGCC 5 cut(s) 620, 1587, 1683, 1698, 1779
BtgZI GCGATG 1 cut(s) 666
BtsIMutI CAGTG 1 cut(s) 735
Cac8I GCNNGC 5 cut(s) 69, 1566, 1879, 1895, 2012
CfoI GCGC 1 cut(s) 1913
Cfr10I RCCGGY 2 cut(s) 67, 274
Cfr13I GGNCC 9 cut(s) 618, 680, 690, 905, 1162, 1217, 1585, 1681, 1777
CseI GACGC 1 cut(s) 47
Csp6I GTAC 2 cut(s) 795, 1313
CspAI ACCGGT 1 cut(s) 274
CspCI CAANNNNNGTGG 2 cut(s) 481, 516
CviAII CATG 3 cut(s) 1013, 1643, 1925
CviQI GTAC 2 cut(s) 795, 1313
DdeI CTNAG 3 cut(s) 27, 375, 417
DpnI GATC 4 cut(s) 672, 874, 1011, 1809
DpnII GATC 4 cut(s) 670, 872, 1009, 1807
Eam1104I CTCTTC 5 cut(s) 230, 323, 438, 1068, 1999
EarI CTCTTC 5 cut(s) 230, 323, 438, 1068, 1999
EciI GGCGGA 1 cut(s) 20
Eco31I GGTCTC 3 cut(s) 991, 1927, 1960
Eco32I GATATC 1 cut(s) 1080
Eco47I GGWCC 5 cut(s) 680, 690, 905, 1162, 1217
EcoO109I RGGNCCY 2 cut(s) 680, 1217
EcoRI GAATTC 1 cut(s) 142
EcoRII CCWGG 4 cut(s) 1220, 1306, 1693, 1724
EcoRV GATATC 1 cut(s) 1080
EcoT22I ATGCAT 1 cut(s) 1057
Esp3I CGTCTC 1 cut(s) 639
FaeI CATG 3 cut(s) 1016, 1646, 1928
FaqI GGGAC 1 cut(s) 1230
FatI CATG 3 cut(s) 1012, 1642, 1924
FauI CCCGC 1 cut(s) 64
Fnu4HI GCNGC 4 cut(s) 1247, 1274, 1326, 2015
Fsp4HI GCNGC 4 cut(s) 1247, 1274, 1326, 2015
FspBI CTAG 2 cut(s) 432, 960
GlaI GCGC 1 cut(s) 1912
GluI GCNGC 4 cut(s) 1247, 1274, 1326, 2015
GsuI CTGGAG 2 cut(s) 711, 1290
HaeIII GGCC 5 cut(s) 620, 1587, 1683, 1698, 1779
HapII CCGG 6 cut(s) 68, 261, 275, 998, 1214, 1583
HgaI GACGC 1 cut(s) 47
HhaI GCGC 1 cut(s) 1913
Hin1II CATG 3 cut(s) 1016, 1646, 1928
Hin6I GCGC 1 cut(s) 1911
HinP1I GCGC 1 cut(s) 1911
HincII GTYRAC 4 cut(s) 37, 1235, 1640, 1736
HindII GTYRAC 4 cut(s) 37, 1235, 1640, 1736
HinfI GANTC 2 cut(s) 350, 371
HpaII CCGG 6 cut(s) 68, 261, 275, 998, 1214, 1583
Hpy166II GTNNAC 8 cut(s) 37, 1036, 1235, 1313, 1640, 1676, 1736, 1888
Hpy188III TCNNGA 3 cut(s) 215, 998, 1762
Hpy8I GTNNAC 8 cut(s) 37, 1036, 1235, 1313, 1640, 1676, 1736, 1888
HpyCH4III ACNGT 2 cut(s) 1506, 1593
HpyCH4IV ACGT 1 cut(s) 1757
HpyF10VI GCNNNNNNNGC 5 cut(s) 38, 709, 1061, 1444, 1613
HpyF3I CTNAG 3 cut(s) 27, 375, 417
HpySE526I ACGT 1 cut(s) 1757
Hsp92II CATG 3 cut(s) 1016, 1646, 1928
HspAI GCGC 1 cut(s) 1911
KflI GGGWCCC 1 cut(s) 1217
Kpn2I TCCGGA 1 cut(s) 997
KpnI GGTACC 1 cut(s) 798
KroI GCCGGC 1 cut(s) 67
KroNI GCCGGC 1 cut(s) 69
Kzo9I GATC 4 cut(s) 670, 872, 1009, 1807
LmnI GCTCC 2 cut(s) 335, 1384
Lsp1109I GCAGC 3 cut(s) 1258, 1285, 1312
LweI GCATC 7 cut(s) 520, 613, 750, 1042, 1064, 1122, 1252
MaeI CTAG 2 cut(s) 432, 960
MaeII ACGT 1 cut(s) 1757
MaeIII GTNAC 3 cut(s) 425, 736, 859
MalI GATC 4 cut(s) 672, 874, 1011, 1809
MboI GATC 4 cut(s) 670, 872, 1009, 1807
MflI RGATCY 2 cut(s) 670, 872
MlyI GAGTC 2 cut(s) 359, 380
MmeI TCCRAC 3 cut(s) 117, 646, 1331
Mph1103I ATGCAT 1 cut(s) 1057
MroI TCCGGA 1 cut(s) 997
MroNI GCCGGC 1 cut(s) 67
MseI TTAA 5 cut(s) 21, 180, 1020, 1269, 1746
MspI CCGG 6 cut(s) 68, 261, 275, 998, 1214, 1583
MspR9I CCNGG 7 cut(s) 262, 1215, 1222, 1308, 1584, 1695, 1726
Mva1269I GAATGC 2 cut(s) 1554, 1821
MvaI CCWGG 4 cut(s) 1222, 1308, 1695, 1726
MwoI GCNNNNNNNGC 5 cut(s) 38, 709, 1061, 1444, 1613
NaeI GCCGGC 1 cut(s) 69
NciI CCSGG 3 cut(s) 262, 1215, 1584
NdeII GATC 4 cut(s) 670, 872, 1009, 1807
NgoMIV GCCGGC 1 cut(s) 67
NlaIII CATG 3 cut(s) 1016, 1646, 1928
NlaIV GGNNCC 4 cut(s) 682, 796, 1218, 1219
NmuCI GTSAC 1 cut(s) 736
NsiI ATGCAT 1 cut(s) 1057
PasI CCCWGGG 1 cut(s) 1725
PcsI WCGNNNNNNNCGW 2 cut(s) 395, 404
PctI GAATGC 2 cut(s) 1554, 1821
PdiI GCCGGC 1 cut(s) 69
PflMI CCANNNNNTGG 1 cut(s) 1826
PinAI ACCGGT 1 cut(s) 274
PkrI GCNGC 4 cut(s) 1248, 1275, 1327, 2016
PleI GAGTC 2 cut(s) 358, 379
PpsI GAGTC 2 cut(s) 358, 379
PpuMI RGGWCCY 2 cut(s) 680, 1217
Psp5II RGGWCCY 2 cut(s) 680, 1217
Psp6I CCWGG 4 cut(s) 1220, 1306, 1693, 1724
PspGI CCWGG 4 cut(s) 1220, 1306, 1693, 1724
PspN4I GGNNCC 4 cut(s) 682, 796, 1218, 1219
PspPI GGNCC 9 cut(s) 618, 680, 690, 905, 1162, 1217, 1585, 1681, 1777
PspPPI RGGWCCY 2 cut(s) 680, 1217
PstI CTGCAG 1 cut(s) 1330
PsuI RGATCY 2 cut(s) 670, 872
RsaI GTAC 2 cut(s) 796, 1314
RsaNI GTAC 2 cut(s) 795, 1313
SaqAI TTAA 5 cut(s) 21, 180, 1020, 1269, 1746
SatI GCNGC 4 cut(s) 1247, 1274, 1326, 2015
Sau3AI GATC 4 cut(s) 670, 872, 1009, 1807
Sau96I GGNCC 9 cut(s) 618, 680, 690, 905, 1162, 1217, 1585, 1681, 1777
SchI GAGTC 2 cut(s) 359, 380
ScrFI CCNGG 7 cut(s) 262, 1215, 1222, 1308, 1584, 1695, 1726
SfaNI GCATC 7 cut(s) 520, 613, 750, 1042, 1064, 1122, 1252
SfcI CTRYAG 2 cut(s) 1326, 1502
SinI GGWCC 5 cut(s) 680, 690, 905, 1162, 1217
SmlI CTYRAG 1 cut(s) 704
SmoI CTYRAG 1 cut(s) 704
SsiI CCGC 7 cut(s) 5, 32, 71, 113, 161, 1007, 1265
SspMI CTAG 2 cut(s) 432, 960
StyD4I CCNGG 7 cut(s) 260, 1213, 1220, 1306, 1582, 1693, 1724
TaaI ACNGT 2 cut(s) 1506, 1593
TaiI ACGT 1 cut(s) 1760
TaqI TCGA 3 cut(s) 63, 848, 2021
Tru1I TTAA 5 cut(s) 21, 180, 1020, 1269, 1746
Tru9I TTAA 5 cut(s) 21, 180, 1020, 1269, 1746
TscAI CASTG 1 cut(s) 735
TseFI GTSAC 1 cut(s) 736
TseI GCWGC 4 cut(s) 1246, 1273, 1325, 2014
Tsp45I GTSAC 1 cut(s) 736
TspGWI ACGGA 3 cut(s) 867, 1485, 1855
TspRI CASTG 1 cut(s) 735
Van91I CCANNNNNTGG 1 cut(s) 1826
VpaK11BI GGWCC 5 cut(s) 680, 690, 905, 1162, 1217
XapI RAATTY 3 cut(s) 142, 978, 1094
XspI CTAG 2 cut(s) 432, 960
Zsp2I ATGCAT 1 cut(s) 1057
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.