callose synthase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G06490 AT1G06490 AT3G59100 AT3G59100 |
| fragaria_vesca | FvH4_6g38480 FvH4_6g38500 |
| malus_domestica | MD17G1137400.v1.1 |
| prunus_persica | Prupe.3G175000_v2.0.a1 Prupe.3G175000_v2.0.a1 |
| pyrus_communis | pycom09g06960 pycom17g13080 |
| rosa_chinensis | RchiOBHm_Chr2g0151731 |
| rosa_laevigata | RLG00000020575 |
| rosa_multiflora | Rmu_sc0005294.1_g000038 |
| rosa_roxburghii | Rroxscaffold_2G00096190 |
| rosa_rugosa | Rorug02G0428500 Rorug02G0428600 |
| rosa_samantha | Rh2AG489600 Rh2BG502000 Rh2CG475800 Rh2DG513100 |
| rosa_wichuraiana | Rw2G040130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1818 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 76 |
| Acc36I | ACCTGC | 1 cut(s) | 3360 |
| Acc65I | GGTACC | 1 cut(s) | 490 |
| AccB1I | GGYRCC | 2 cut(s) | 490, 1443 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 487, 1096 |
| AccI | GTMKAC | 1 cut(s) | 2784 |
| AccII | CGCG | 2 cut(s) | 49, 3243 |
| AclI | AACGTT | 1 cut(s) | 901 |
| AclWI | GGATC | 7 cut(s) | 245, 258, 347, 1337, 1350, 2024, 3398 |
| AcoI | YGGCCR | 3 cut(s) | 1098, 1334, 1857 |
| AcuI | CTGAAG | 8 cut(s) | 389, 552, 726, 1546, 1762, 2907, 3512, 3755 |
| AcvI | CACGTG | 1 cut(s) | 3227 |
| AcyI | GRCGYC | 1 cut(s) | 116 |
| AfeI | AGCGCT | 2 cut(s) | 639, 1904 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 487, 1096, 1145, 3453, 3454, 4129 |
| AflII | CTTAAG | 2 cut(s) | 3053, 3589 |
| AflIII | ACRYGT | 1 cut(s) | 2140 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 115 |
| AjiI | CACGTC | 1 cut(s) | 269 |
| AjnI | CCWGG | 7 cut(s) | 935, 1494, 2190, 3537, 3615, 3883, 4122 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2369, 2401 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 258, 290 |
| Alw21I | GWGCWC | 5 cut(s) | 11, 480, 3232, 3472, 3685 |
| Alw26I | GTCTC | 3 cut(s) | 320, 2699, 3109 |
| AlwI | GGATC | 7 cut(s) | 245, 258, 347, 1337, 1350, 2024, 3398 |
| Ama87I | CYCGRG | 6 cut(s) | 34, 104, 136, 623, 978, 3705 |
| Aor51HI | AGCGCT | 2 cut(s) | 639, 1904 |
| AoxI | GGCC | 6 cut(s) | 1098, 1334, 1376, 1857, 2567, 2728 |
| ApeKI | GCWGC | 7 cut(s) | 635, 1163, 1166, 1388, 2524, 2800, 2836 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 258, 280, 290, 312, 3273, 3305 |
| AseI | ATTAAT | 2 cut(s) | 126, 4148 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1775, 2468 |
| Asp718I | GGTACC | 1 cut(s) | 490 |
| AspA2I | CCTAGG | 1 cut(s) | 197 |
| AspLEI | GCGC | 4 cut(s) | 640, 1021, 1905, 3186 |
| AspS9I | GGNCC | 4 cut(s) | 1308, 2286, 2304, 3887 |
| AsuC2I | CCSGG | 4 cut(s) | 35, 36, 137, 138 |
| AsuHPI | GGTGA | 6 cut(s) | 1052, 2288, 3032, 3181, 3857, 4150 |
| AvaI | CYCGRG | 6 cut(s) | 34, 104, 136, 623, 978, 3705 |
| AvaII | GGWCC | 4 cut(s) | 1308, 2286, 2304, 3887 |
| AvrII | CCTAGG | 1 cut(s) | 197 |
| BaeGI | GKGCMC | 1 cut(s) | 135 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 474, 507 |
| BalI | TGGCCA | 2 cut(s) | 1100, 1336 |
| BamHI | GGATCC | 2 cut(s) | 250, 1342 |
| BanI | GGYRCC | 2 cut(s) | 490, 1443 |
| BanII | GRGCYC | 3 cut(s) | 11, 1945, 2182 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 14, 46, 3102, 3134 |
| BauI | CACGAG | 2 cut(s) | 3621, 3948 |
| BbrPI | CACGTG | 1 cut(s) | 3227 |
| BbsI | GAAGAC | 5 cut(s) | 29, 659, 714, 1552, 2499 |
| Bbv12I | GWGCWC | 5 cut(s) | 11, 480, 3232, 3472, 3685 |
| BbvCI | CCTCAGC | 1 cut(s) | 2418 |
| BbvI | GCAGC | 7 cut(s) | 647, 1175, 1178, 1375, 2511, 2812, 2823 |
| BccI | CCATC | 9 cut(s) | 401, 430, 520, 901, 1090, 1266, 3011, 3158, 3323 |
| BceAI | ACGGC | 3 cut(s) | 1272, 1847, 2335 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2969, 3003 |
| BciT130I | CCWGG | 7 cut(s) | 937, 1496, 2192, 3539, 3617, 3885, 4124 |
| BclI | TGATCA | 1 cut(s) | 2970 |
| BcnI | CCSGG | 4 cut(s) | 35, 36, 137, 138 |
| BcoDI | GTCTC | 3 cut(s) | 320, 2699, 3109 |
| BfaI | CTAG | 9 cut(s) | 198, 1328, 1740, 1791, 2586, 3483, 3521, 3833, 4164 |
| BfmI | CTRYAG | 8 cut(s) | 726, 1450, 1698, 1758, 3353, 3508, 3894, 3962 |
| BfoI | RGCGCY | 2 cut(s) | 641, 1906 |
| BfrI | CTTAAG | 2 cut(s) | 3053, 3589 |
| BfuAI | ACCTGC | 1 cut(s) | 3360 |
| BglII | AGATCT | 2 cut(s) | 347, 2518 |
| BlnI | CCTAGG | 1 cut(s) | 197 |
| BlpI | GCTNAGC | 1 cut(s) | 1944 |
| BmcAI | AGTACT | 1 cut(s) | 465 |
| Bme18I | GGWCC | 4 cut(s) | 1308, 2286, 2304, 3887 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 115 |
| BmeT110I | CYCGRG | 6 cut(s) | 34, 104, 136, 623, 978, 3705 |
| BmgBI | CACGTC | 1 cut(s) | 269 |
| BmgT120I | GGNCC | 4 cut(s) | 1308, 2286, 2304, 3887 |
| BmiI | GGNNCC | 8 cut(s) | 252, 492, 974, 1344, 1445, 2181, 2288, 4204 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2558 |
| BpiI | GAAGAC | 5 cut(s) | 29, 659, 714, 1552, 2499 |
| BpmI | CTGGAG | 2 cut(s) | 464, 3017 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2418 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1944 |
| BpuMI | CCSGG | 4 cut(s) | 35, 36, 137, 138 |
| BsaAI | YACGTR | 2 cut(s) | 3227, 3764 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2517, 4150 |
| BsaHI | GRCGYC | 1 cut(s) | 116 |
| BsaWI | WCCGGW | 2 cut(s) | 427, 1145 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3026, 3056 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 487, 1096, 1145, 3453, 3454, 4129 |
| Bse1I | ACTGG | 3 cut(s) | 2563, 3000, 4102 |
| Bse3DI | GCAATG | 3 cut(s) | 1014, 1135, 2166 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2517, 4150 |
| BseBI | CCWGG | 7 cut(s) | 937, 1496, 2192, 3539, 3617, 3885, 4124 |
| BseJI | GATNNNNATC | 2 cut(s) | 2517, 4150 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 487, 1096, 1145, 3453, 3454, 4129 |
| BseMI | GCAATG | 3 cut(s) | 1014, 1135, 2166 |
| BseMII | CTCAG | 8 cut(s) | 867, 1958, 2409, 2697, 2725, 3095, 3414, 3698 |
| BseNI | ACTGG | 3 cut(s) | 2563, 3000, 4102 |
| BseRI | GAGGAG | 2 cut(s) | 200, 3803 |
| BseSI | GKGCMC | 1 cut(s) | 135 |
| BseXI | GCAGC | 7 cut(s) | 647, 1175, 1178, 1375, 2511, 2812, 2823 |
| BsgI | GTGCAG | 1 cut(s) | 1769 |
| Bsh1236I | CGCG | 2 cut(s) | 49, 3243 |
| Bsh1285I | CGRYCG | 3 cut(s) | 53, 1465, 2489 |
| BshFI | GGCC | 6 cut(s) | 1100, 1336, 1378, 1859, 2569, 2730 |
| BshNI | GGYRCC | 2 cut(s) | 490, 1443 |
| BsiEI | CGRYCG | 3 cut(s) | 53, 1465, 2489 |
| BsiHKAI | GWGCWC | 5 cut(s) | 11, 480, 3232, 3472, 3685 |
| BsiHKCI | CYCGRG | 6 cut(s) | 34, 104, 136, 623, 978, 3705 |
| BsiSI | CCGG | 5 cut(s) | 35, 137, 428, 1139, 1146 |
| BslFI | GGGAC | 2 cut(s) | 31, 153 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 487, 1096, 1145, 3453, 3454, 4129 |
| BsmAI | GTCTC | 3 cut(s) | 320, 2699, 3109 |
| BsmFI | GGGAC | 2 cut(s) | 31, 153 |
| BsmI | GAATGC | 3 cut(s) | 1076, 2261, 2702 |
| BsnI | GGCC | 6 cut(s) | 1100, 1336, 1378, 1859, 2569, 2730 |
| BsoBI | CYCGRG | 6 cut(s) | 34, 104, 136, 623, 978, 3705 |
| Bsp1286I | GDGCHC | 8 cut(s) | 11, 135, 480, 1945, 2182, 3232, 3472, 3685 |
| Bsp1407I | TGTACA | 3 cut(s) | 649, 688, 1224 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1944 |
| Bsp19I | CCATGG | 1 cut(s) | 223 |
| Bsp68I | TCGCGA | 1 cut(s) | 3243 |
| BspANI | GGCC | 6 cut(s) | 1100, 1336, 1378, 1859, 2569, 2730 |
| BspCNI | CTCAG | 8 cut(s) | 868, 1957, 2410, 2696, 2724, 3094, 3415, 3697 |
| BspFNI | CGCG | 2 cut(s) | 49, 3243 |
| BspHI | TCATGA | 2 cut(s) | 1975, 3213 |
| BspLI | GGNNCC | 8 cut(s) | 252, 492, 974, 1344, 1445, 2181, 2288, 4204 |
| BspMAI | CTGCAG | 3 cut(s) | 730, 3357, 3966 |
| BspMI | ACCTGC | 1 cut(s) | 3360 |
| BspPI | GGATC | 7 cut(s) | 245, 258, 347, 1337, 1350, 2024, 3398 |
| BspQI | GCTCTTC | 1 cut(s) | 1646 |
| BspT107I | GGYRCC | 2 cut(s) | 490, 1443 |
| BspTI | CTTAAG | 2 cut(s) | 3053, 3589 |
| BsrDI | GCAATG | 3 cut(s) | 1014, 1135, 2166 |
| BsrGI | TGTACA | 3 cut(s) | 649, 688, 1224 |
| BsrI | ACTGG | 3 cut(s) | 2563, 3000, 4102 |
| BssNI | GRCGYC | 1 cut(s) | 116 |
| BssSI | CACGAG | 2 cut(s) | 3621, 3948 |
| BssT1I | CCWWGG | 3 cut(s) | 197, 223, 2290 |
| Bst2BI | CACGAG | 2 cut(s) | 3621, 3948 |
| Bst2UI | CCWGG | 7 cut(s) | 937, 1496, 2192, 3539, 3617, 3885, 4124 |
| Bst6I | CTCTTC | 6 cut(s) | 426, 1173, 1646, 1960, 2733, 2739 |
| BstACI | GRCGYC | 1 cut(s) | 116 |
| BstAFI | CTTAAG | 2 cut(s) | 3053, 3589 |
| BstAUI | TGTACA | 3 cut(s) | 649, 688, 1224 |
| BstBAI | YACGTR | 2 cut(s) | 3227, 3764 |
| BstDSI | CCRYGG | 3 cut(s) | 47, 223, 891 |
| BstFNI | CGCG | 2 cut(s) | 49, 3243 |
| BstH2I | RGCGCY | 2 cut(s) | 641, 1906 |
| BstHHI | GCGC | 4 cut(s) | 640, 1021, 1905, 3186 |
| BstMAI | GTCTC | 3 cut(s) | 320, 2699, 3109 |
| BstMCI | CGRYCG | 3 cut(s) | 53, 1465, 2489 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 298, 644, 1333, 1496, 1575, 1900, 2177, 3617 |
| BstNI | CCWGG | 7 cut(s) | 937, 1496, 2192, 3539, 3617, 3885, 4124 |
| BstNSI | RCATGY | 4 cut(s) | 100, 2144, 3223, 3250 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2558 |
| BstSFI | CTRYAG | 8 cut(s) | 726, 1450, 1698, 1758, 3353, 3508, 3894, 3962 |
| BstSLI | GKGCMC | 1 cut(s) | 135 |
| BstSNI | TACGTA | 1 cut(s) | 3764 |
| BstUI | CGCG | 2 cut(s) | 49, 3243 |
| BstV1I | GCAGC | 7 cut(s) | 647, 1175, 1178, 1375, 2511, 2812, 2823 |
| BstV2I | GAAGAC | 5 cut(s) | 29, 659, 714, 1552, 2499 |
| BstX2I | RGATCY | 4 cut(s) | 250, 347, 1342, 2518 |
| BstYI | RGATCY | 4 cut(s) | 250, 347, 1342, 2518 |
| BsuRI | GGCC | 6 cut(s) | 1100, 1336, 1378, 1859, 2569, 2730 |
| BtgI | CCRYGG | 3 cut(s) | 47, 223, 891 |
| BtgZI | GCGATG | 1 cut(s) | 2994 |
| BtrI | CACGTC | 1 cut(s) | 269 |
| BtsI | GCAGTG | 1 cut(s) | 1991 |
| BtsIMutI | CAGTG | 8 cut(s) | 492, 873, 1991, 2570, 3458, 3495, 3536, 4095 |
| BtuMI | TCGCGA | 1 cut(s) | 3243 |
| BveI | ACCTGC | 1 cut(s) | 3360 |
| CciI | TCATGA | 2 cut(s) | 1975, 3213 |
| CfoI | GCGC | 4 cut(s) | 640, 1021, 1905, 3186 |
| Cfr13I | GGNCC | 4 cut(s) | 1308, 2286, 2304, 3887 |
| Cfr42I | CCGCGG | 1 cut(s) | 50 |
| Cfr9I | CCCGGG | 2 cut(s) | 34, 136 |
| CseI | GACGC | 4 cut(s) | 105, 298, 2903, 3523 |
| DraI | TTTAAA | 1 cut(s) | 922 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 76 |
| DriI | GACNNNNNGTC | 1 cut(s) | 115 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 76 |
| EaeI | YGGCCR | 3 cut(s) | 1098, 1334, 1857 |
| Eam1104I | CTCTTC | 6 cut(s) | 426, 1173, 1646, 1960, 2733, 2739 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 115 |
| EarI | CTCTTC | 6 cut(s) | 426, 1173, 1646, 1960, 2733, 2739 |
| EciI | GGCGGA | 1 cut(s) | 1816 |
| Ecl136II | GAGCTC | 1 cut(s) | 9 |
| Eco105I | TACGTA | 1 cut(s) | 3764 |
| Eco130I | CCWWGG | 3 cut(s) | 197, 223, 2290 |
| Eco24I | GRGCYC | 3 cut(s) | 11, 1945, 2182 |
| Eco47I | GGWCC | 4 cut(s) | 1308, 2286, 2304, 3887 |
| Eco47III | AGCGCT | 2 cut(s) | 639, 1904 |
| Eco53kI | GAGCTC | 1 cut(s) | 9 |
| Eco57I | CTGAAG | 8 cut(s) | 389, 552, 726, 1546, 1762, 2907, 3512, 3755 |
| Eco72I | CACGTG | 1 cut(s) | 3227 |
| Eco88I | CYCGRG | 6 cut(s) | 34, 104, 136, 623, 978, 3705 |
| EcoICRI | GAGCTC | 1 cut(s) | 9 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3887 |
| EcoRI | GAATTC | 1 cut(s) | 4031 |
| EcoRII | CCWGG | 7 cut(s) | 935, 1494, 2190, 3537, 3615, 3883, 4122 |
| EcoT14I | CCWWGG | 3 cut(s) | 197, 223, 2290 |
| EcoT38I | GRGCYC | 3 cut(s) | 11, 1945, 2182 |
| ErhI | CCWWGG | 3 cut(s) | 197, 223, 2290 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 624, 656 |
| FaqI | GGGAC | 2 cut(s) | 31, 153 |
| FauI | CCCGC | 1 cut(s) | 8 |
| FauNDI | CATATG | 2 cut(s) | 1034, 2771 |
| FbaI | TGATCA | 1 cut(s) | 2970 |
| FblI | GTMKAC | 1 cut(s) | 2784 |
| FriOI | GRGCYC | 3 cut(s) | 11, 1945, 2182 |
| FspBI | CTAG | 9 cut(s) | 198, 1328, 1740, 1791, 2586, 3483, 3521, 3833, 4164 |
| GlaI | GCGC | 4 cut(s) | 639, 1020, 1904, 3185 |
| GsuI | CTGGAG | 2 cut(s) | 464, 3017 |
| HaeII | RGCGCY | 2 cut(s) | 641, 1906 |
| HaeIII | GGCC | 6 cut(s) | 1100, 1336, 1378, 1859, 2569, 2730 |
| HapII | CCGG | 5 cut(s) | 35, 137, 428, 1139, 1146 |
| HgaI | GACGC | 4 cut(s) | 105, 298, 2903, 3523 |
| HhaI | GCGC | 4 cut(s) | 640, 1021, 1905, 3186 |
| Hin1I | GRCGYC | 1 cut(s) | 116 |
| Hin6I | GCGC | 4 cut(s) | 638, 1019, 1903, 3184 |
| HinP1I | GCGC | 4 cut(s) | 638, 1019, 1903, 3184 |
| HincII | GTYRAC | 3 cut(s) | 565, 717, 3444 |
| HindII | GTYRAC | 3 cut(s) | 565, 717, 3444 |
| HindIII | AAGCTT | 3 cut(s) | 1044, 3050, 4002 |
| HpaI | GTTAAC | 1 cut(s) | 3444 |
| HpaII | CCGG | 5 cut(s) | 35, 137, 428, 1139, 1146 |
| HphI | GGTGA | 6 cut(s) | 1052, 2288, 3032, 3181, 3857, 4150 |
| Hpy166II | GTNNAC | 8 cut(s) | 81, 266, 417, 565, 717, 2785, 3444, 3651 |
| Hpy8I | GTNNAC | 8 cut(s) | 81, 266, 417, 565, 717, 2785, 3444, 3651 |
| Hpy99I | CGWCG | 2 cut(s) | 121, 4050 |
| HpyCH4IV | ACGT | 7 cut(s) | 268, 901, 3027, 3070, 3226, 3749, 3763 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 298, 644, 1333, 1496, 1575, 1900, 2177, 3617 |
| HpySE526I | ACGT | 7 cut(s) | 268, 901, 3027, 3070, 3226, 3749, 3763 |
| Hsp92I | GRCGYC | 1 cut(s) | 116 |
| HspAI | GCGC | 4 cut(s) | 638, 1019, 1903, 3184 |
| KpnI | GGTACC | 1 cut(s) | 494 |
| Ksp22I | TGATCA | 1 cut(s) | 2970 |
| KspAI | GTTAAC | 1 cut(s) | 3444 |
| KspI | CCGCGG | 1 cut(s) | 50 |
| LguI | GCTCTTC | 1 cut(s) | 1646 |
| Lsp1109I | GCAGC | 7 cut(s) | 647, 1175, 1178, 1375, 2511, 2812, 2823 |
| MaeI | CTAG | 9 cut(s) | 198, 1328, 1740, 1791, 2586, 3483, 3521, 3833, 4164 |
| MaeII | ACGT | 7 cut(s) | 268, 901, 3027, 3070, 3226, 3749, 3763 |
| MaeIII | GTNAC | 6 cut(s) | 1201, 1608, 1921, 2143, 2551, 3845 |
| MfeI | CAATTG | 5 cut(s) | 150, 998, 2184, 2384, 4192 |
| MflI | RGATCY | 4 cut(s) | 250, 347, 1342, 2518 |
| MhlI | GDGCHC | 8 cut(s) | 11, 135, 480, 1945, 2182, 3232, 3472, 3685 |
| MlsI | TGGCCA | 2 cut(s) | 1100, 1336 |
| MluNI | TGGCCA | 2 cut(s) | 1100, 1336 |
| MlyI | GAGTC | 6 cut(s) | 177, 1190, 1528, 2309, 3152, 3262 |
| MmeI | TCCRAC | 5 cut(s) | 99, 278, 1335, 1628, 2838 |
| Mox20I | TGGCCA | 2 cut(s) | 1100, 1336 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1775, 2468 |
| MscI | TGGCCA | 2 cut(s) | 1100, 1336 |
| MslI | CAYNNNNRTG | 7 cut(s) | 128, 2215, 2274, 3012, 3155, 3218, 4047 |
| Msp20I | TGGCCA | 2 cut(s) | 1100, 1336 |
| MspA1I | CMGCKG | 3 cut(s) | 15, 49, 2803 |
| MspCI | CTTAAG | 2 cut(s) | 3053, 3589 |
| MspI | CCGG | 5 cut(s) | 35, 137, 428, 1139, 1146 |
| MunI | CAATTG | 5 cut(s) | 150, 998, 2184, 2384, 4192 |
| Mva1269I | GAATGC | 3 cut(s) | 1076, 2261, 2702 |
| MvaI | CCWGG | 7 cut(s) | 937, 1496, 2192, 3539, 3617, 3885, 4124 |
| MvnI | CGCG | 2 cut(s) | 49, 3243 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 298, 644, 1333, 1496, 1575, 1900, 2177, 3617 |
| NciI | CCSGG | 4 cut(s) | 35, 36, 137, 138 |
| NcoI | CCATGG | 1 cut(s) | 223 |
| NdeI | CATATG | 2 cut(s) | 1034, 2771 |
| NlaIV | GGNNCC | 8 cut(s) | 252, 492, 974, 1344, 1445, 2181, 2288, 4204 |
| NmuCI | GTSAC | 3 cut(s) | 1921, 2551, 3845 |
| NruI | TCGCGA | 1 cut(s) | 3243 |
| NspI | RCATGY | 4 cut(s) | 100, 2144, 3223, 3250 |
| PaeR7I | CTCGAG | 1 cut(s) | 978 |
| PagI | TCATGA | 2 cut(s) | 1975, 3213 |
| PciI | ACATGT | 1 cut(s) | 2140 |
| PciSI | GCTCTTC | 1 cut(s) | 1646 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 274, 4054 |
| PctI | GAATGC | 3 cut(s) | 1076, 2261, 2702 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1775, 2468 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 487, 1096 |
| PfoI | TCCNGGA | 1 cut(s) | 3537 |
| Ple19I | CGATCG | 2 cut(s) | 1465, 2489 |
| PleI | GAGTC | 6 cut(s) | 176, 1189, 1527, 2309, 3151, 3262 |
| PmaCI | CACGTG | 1 cut(s) | 3227 |
| PmlI | CACGTG | 1 cut(s) | 3227 |
| PpsI | GAGTC | 6 cut(s) | 176, 1189, 1527, 2309, 3151, 3262 |
| Ppu21I | YACGTR | 2 cut(s) | 3227, 3764 |
| PpuMI | RGGWCCY | 1 cut(s) | 3887 |
| PscI | ACATGT | 1 cut(s) | 2140 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2558 |
| PshBI | ATTAAT | 2 cut(s) | 126, 4148 |
| PsiI | TTATAA | 1 cut(s) | 1818 |
| Psp124BI | GAGCTC | 1 cut(s) | 11 |
| Psp1406I | AACGTT | 1 cut(s) | 901 |
| Psp5II | RGGWCCY | 1 cut(s) | 3887 |
| Psp6I | CCWGG | 7 cut(s) | 935, 1494, 2190, 3537, 3615, 3883, 4122 |
| PspCI | CACGTG | 1 cut(s) | 3227 |
| PspGI | CCWGG | 7 cut(s) | 935, 1494, 2190, 3537, 3615, 3883, 4122 |
| PspN4I | GGNNCC | 8 cut(s) | 252, 492, 974, 1344, 1445, 2181, 2288, 4204 |
| PspPI | GGNCC | 4 cut(s) | 1308, 2286, 2304, 3887 |
| PspPPI | RGGWCCY | 1 cut(s) | 3887 |
| PstI | CTGCAG | 3 cut(s) | 730, 3357, 3966 |
| PsuI | RGATCY | 4 cut(s) | 250, 347, 1342, 2518 |
| PvuI | CGATCG | 2 cut(s) | 1465, 2489 |
| RruI | TCGCGA | 1 cut(s) | 3243 |
| RseI | CAYNNNNRTG | 7 cut(s) | 128, 2215, 2274, 3012, 3155, 3218, 4047 |
| SacI | GAGCTC | 1 cut(s) | 11 |
| SacII | CCGCGG | 1 cut(s) | 50 |
| SapI | GCTCTTC | 1 cut(s) | 1646 |
| Sau96I | GGNCC | 4 cut(s) | 1308, 2286, 2304, 3887 |
| ScaI | AGTACT | 1 cut(s) | 465 |
| SchI | GAGTC | 6 cut(s) | 177, 1190, 1528, 2309, 3152, 3262 |
| SduI | GDGCHC | 8 cut(s) | 11, 135, 480, 1945, 2182, 3232, 3472, 3685 |
| SfcI | CTRYAG | 8 cut(s) | 726, 1450, 1698, 1758, 3353, 3508, 3894, 3962 |
| Sfr274I | CTCGAG | 1 cut(s) | 978 |
| Sfr303I | CCGCGG | 1 cut(s) | 50 |
| SgrBI | CCGCGG | 1 cut(s) | 50 |
| SinI | GGWCC | 4 cut(s) | 1308, 2286, 2304, 3887 |
| SlaI | CTCGAG | 1 cut(s) | 978 |
| SmaI | CCCGGG | 2 cut(s) | 36, 138 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 128, 2215, 2274, 3012, 3155, 3218, 4047 |
| SmlI | CTYRAG | 3 cut(s) | 978, 3053, 3589 |
| SmoI | CTYRAG | 3 cut(s) | 978, 3053, 3589 |
| SnaBI | TACGTA | 1 cut(s) | 3764 |
| SspI | AATATT | 4 cut(s) | 1054, 2155, 2229, 4071 |
| SspMI | CTAG | 9 cut(s) | 198, 1328, 1740, 1791, 2586, 3483, 3521, 3833, 4164 |
| SstI | GAGCTC | 1 cut(s) | 11 |
| StyI | CCWWGG | 3 cut(s) | 197, 223, 2290 |
| TaiI | ACGT | 7 cut(s) | 271, 904, 3030, 3073, 3229, 3752, 3766 |
| TaqII | GACCGA | 1 cut(s) | 41 |
| TatI | WGTACW | 7 cut(s) | 414, 463, 649, 688, 1224, 2679, 3504 |
| TauI | GCSGC | 3 cut(s) | 103, 219, 1862 |
| TscAI | CASTG | 8 cut(s) | 492, 880, 1998, 2570, 3458, 3495, 3536, 4102 |
| TseFI | GTSAC | 3 cut(s) | 1921, 2551, 3845 |
| TseI | GCWGC | 7 cut(s) | 635, 1163, 1166, 1388, 2524, 2800, 2836 |
| Tsp45I | GTSAC | 3 cut(s) | 1921, 2551, 3845 |
| TspGWI | ACGGA | 5 cut(s) | 570, 1903, 2299, 3409, 3800 |
| TspMI | CCCGGG | 2 cut(s) | 34, 136 |
| TspRI | CASTG | 8 cut(s) | 492, 880, 1998, 2570, 3458, 3495, 3536, 4102 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 487, 1096 |
| Vha464I | CTTAAG | 2 cut(s) | 3053, 3589 |
| VpaK11BI | GGWCC | 4 cut(s) | 1308, 2286, 2304, 3887 |
| VspI | ATTAAT | 2 cut(s) | 126, 4148 |
| XbaI | TCTAGA | 2 cut(s) | 3482, 3520 |
| XceI | RCATGY | 4 cut(s) | 100, 2144, 3223, 3250 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 88, 4191 |
| XhoI | CTCGAG | 1 cut(s) | 978 |
| XmaI | CCCGGG | 2 cut(s) | 34, 136 |
| XmaJI | CCTAGG | 1 cut(s) | 197 |
| XmiI | GTMKAC | 1 cut(s) | 2784 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1775, 2468 |
| XspI | CTAG | 9 cut(s) | 198, 1328, 1740, 1791, 2586, 3483, 3521, 3833, 4164 |
| ZrmI | AGTACT | 1 cut(s) | 465 |