Rmu_sc0005294.1_g000038

callose synthase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005294.1
Physical Location & Seq
Forward (+)
149662 .. 168031
18370 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005294.1_g000038.1.cds

Sequence Viewer

Length: 6285 bp
atggcgagctccagcgggaccaaggccgatgcgcggccgcagaggtcgctgtcgaggggaatgacgagaatggctactagagttgtggactttccgacggagggcgacgatgcgttggacagtggagttgtgccgtcgtgccttgcgtctattgctccgattttccgggttgccaatgagattgagaaggacaaccctagggttgcttatctctgccgcttccatggatttgaaaaggcgcataccatggatccaacatcaagtggacgtggagttcgtcagtttaagacgcatcttttgcacagactcgaaagggacgaagtagatacaaaacatcagcttgctaaatctgatacaaaagaaatcatgttgtattaccaccaattctatgagaaaaatatcagagatggagaatataccaagaaaccggaagagatggccaggatttgtcagattgcaactgtactgtatgatgtgctcaggacagtggtacctgcttctcaaatagacatacagacccagagaattgctgaagatgtcaagagcaaaagggagcaatatgtaaactataacattcttccattatatactgtcggggttaaaccgacaattatggaacttcctgagatcaaagcagcgctccgtgctctacagaatgtgagtaatcttccaatgccaagaatgcaatttaaacccacgaatcctgatgacaagtcgacaatgcctacagagaggattaaacctgtgaatgatatactcgattggctttcggctatttttgggtttcagaaaggaaatgtggcaaatcagagggaacatttaattttgttgcttgccaacattgatgtaagacatagaagtcctgagaactacaatgagttgaatagtgcaactgtacagcatttgatggagaaattctttaagaattatcgttcatggtataactatctgcattgtaaaacaaatcttcggttccccgaaggttctcacagcaaacaacaattggaacttatatacattgctctctatcttctcatatggggtgaagcttcaaatgtccgattcatgcctgaatgcttatgctacattttccataatatggcgaacgaggtctatggaattttaaatagcaatgctcatactgttagtggagaaacataccaaacagttgtacgtgatgaagaatcttttttgagggatgttataactcctatctaccaggttctgtacaaggaagcaaagagaaacaaaatgggcaaggcaagtcattcaagatggagaaattatgatgatttgaatgaatacttctggtcggacaaatgttttaagctagggtggccaatggatgctaaagcagatttctttaggcattcagatgggatacaaccagtaaatgagaggaccaatcaagctactggtggtaggaggaagcctaaaacaaattttgtagaagtccgaacatttttacacctctacagaagttttgatcgaatgtggatattcttcatattggctttacaggctatgattattattgcatggagtccttctggatctatcacttcaatatttgatgcagacgtcttcagaagtgttttaagcatcttcatgtcatatgctttccttaatttattacaagccactttggacataattctcagttggaatgcatggaagagcttgaaagtcactcaaatattacgatacctcttgaaatttgcagtagctgttgtctgggctgtggttctgcctattggttattctagttctatgcaaaatcctacagggcttctgaaattcttcagtagttggagtcgggattggcggaatcagtcattttataattatgctgttgcaatctatatggttcctaatttattggctgctatgctattttttcttccacctttacgaagacacatagagcgttccaactggcgcattgtcactctttttatgtggtgggctcagccaaaactgtatgtcggaagaggaatgcatgaggatgtcttctcactgctgaaatatacattgttctggatcatgctgctaatcagcaagctagcgttcagctattatgtggagatattgccgcttgttgcaccaacgaagttgataatggatatgccgatcagtaattaccaatggcatgagttctttccgaatgcaacgcataatattggtgttgtcattgcaatatggactccaattatcctggtatattttatggatgcacaaatatggtatgcaatattttctactctgtttggtgggattcacggagccttcagccatttgggggagatacgaacacttgggatgttgcggtccagatttgagtctgtgccttcagctttcagtgatcggcttatgccatcgtcagagaataaggatgccagaaagaagaaacacttggtggatgaaggacttgttcgaaagaacattgctaatttctctcaggtctggaatgaatttataaattctatgcgaatggaagacctgatcagcaatagggatagggatctgctgcttgttccgtattcttcaagtgatgtttctgttgtccagtggcctcctttcttgctggctagcaagattccaatagcattagacatggcaaaggattttacaggaaagtcggatgatgatttattcaggaagattaggaatgatgattatatgtactcggcagtgattgaatgctatgagacactcagggatattatatttggccttcttgatgatgacgccgataagatgattgtaaggcagatatgttatgaagtagacagtagtatacagcagcagaggtttttgattaatttccgtatgagtgggctgccatttcttagtgagaggttggagaagtttctcaaactcttgctagccgaagatgagaatgtcgaaaattccttgcgtcagataatcaatgtccttcaagatatcatggagattataacacaggatgtaatgatcaatggccatgaaatcctcgaagcagctcactacatagagggtcaaaatgtcaagaaggagcaaaggtttcaaaaaatcaacatatatcttgcccaaaatccatcttggagagagaaggtcgttaggcttcatttgcttttgaccgtcaaggaatctgccatcaatgtgccccaaaacttggatgctcgcaggcgcattactttctttgcgaactccttattcatgaacatgccaaatgctcccaaagttcgtgacatgctctcctttagtgttctgactccttattacaaagaagatgttctttattctgatgaggaacttaccaaggaaaatgaggatggaatctcaattttgttctacctgcagaagatatatcctgatgaatggacaaatttcctggaccgcataaatgaacataaaagtcagtacactgaaaaggacaagtcggagttaattcgtcagtgggtatcttacaggggacagacactttctagaacagtgagagggatgatgtactataggaaggctctagaccttcaatgtatcctggaaacagcaggagatggtggtgtttatggaggcgacgcagcccatattttaagtgataaagaagagaaggatattcttgatcgggcacaagctctggcagatttgaagttcacttatgtagtttcttgtcaggtctatggtgaacagaagaattccactgaagcccgagacaaaagttgttacactaatattctcaagctgatgttaacgtatccatctctacgtgttgcttacatagatacaagagagaagacagtgaatggaaaatcccaaaaggttcatttctctgttctggtcaagggaggtgacaaatgggatgaggaaatataccgcatcaagcttccaggtcctccaacagcaattggtgaaggaaaacccgaaaatcaaaaccatgccatcgtatttactcgtggagaagccctgcaaaccattgacatgaatcaggataattattttgaggaagctttcaaaatgagaaatgtattggaggaatttctaaagcctcgacgggggcagcggaaacctacaatattgggtctaagggaacatatatttaccggaagtgtttcatcactcgcttggttcatgtccaatcaagagacaagttttgtgactataggccaacgaattttggcaaatccactgagggtacggtttcattatggccatcctgatatttttgacagaatctttcacataacaagaggcggcataagcaaagcatcaaaagtaattaacttaagcgaggatatattttcaggatataattctgttctgcgtgggggatttataacacatcatgagtatatccaagtaggcaaggggcgtgatgttggaatgaatcaaatatcgcttttcgaggctaaagttgcaaatggaaatggagagcagacacttagccgtgatgtttataggcttgggcgtcggtttgatttctatagaatgctgtctttttacttcacaacagttgggttctattttagtagtatggtaactgtgctgactgtctatgtgtttttatatggacgtctatatatggttatgagtggattggaaagtgagatcctggatagcccagccatacatcagaccaaggcttttgaacaagctctggctacacagtctgtctttcaactgggcttgttgctggtccttcccatggttatggaaattggtctggagaaaggatttcgcactgccttgggtgatttcatcatcatgcagctgcagctggcctctgttttcttcactttccaactaggaacaaaagcacattactacggaaggacaatcttacatggaggatctaaatatcgagcaactggccgtggttttgttgtttttcatgcaaagtttgccgataactacaggctgtactcacgaagtcactttgtgaaagggttggagctgttgattctgctgattgtgtatggagtctatgggactgcatataggagttcaaatctgtattttttcatcacgttctccatgtggtttctggttgcttcctggttgtttgctccttttatctttaatccgtccagctttgactggcaaaaaactgtagatgattggacggattggaagaggtggatgggaaatcgtggtggtattgggatctcacctgacaaaagttgggaatcatggtgggatgaagaacaggaacacctcaagcacactattatccgtggaagaattattgagataattcttgcatgtcgcttctttttttaccaatatgggattgtttaccacctcgatatagctcatttcagcaagagtttactggtttatggactttcttgggtggttatggtaacggtgctccttgtcttaaagatggtgtcaatgggtagacgaagatttggcactgactttcagctcatgttcagaattctgaaggcgcttctttttcttggcttcatgtcagtcatgactgtcctatttgtagtttgtggccttactatttctgatctatttgctgctattcttgccttcttgcccacagggtgggcactacttcttatcgggcaagtatgcaggccaatggttaagggagtaggattctgggaatcaattaaggagctgggaagagcctatgattacataatgggagtggtagtcttcatgccggttgccgttttgtcatggttcccatttgtctcagagttccaaacacgactacaggagcagcaacaacaacagcccaatttggctccccaacacccagtaatgcagtcgaaaccacaaggtgtcatggcttctaataatttgcagcagcaaggaagcaaaaatgttcagactggacggcccccaaatattctcaccttaagcttgactacaggtacaaccttggaagagtttaaatttggattcccatctgaaggtttatcaactgcatccaatagatggtggggaagcaatagccctaattgtgatgagggcgtccatggagaagcagctaagagtgatgaaggcaacaaacatcagtctgtcaaattagcagatgatagtgcaagttcaattacagggaacaaagagaaatgtgaaagtgaaaaagaagagagcagcattgatccacaagggacagatttattggtggccgtgagaaaaagagcggtggaagaagggaaacaggcacttaagcttggtgcattccgtggatatggtgcaaagaagctagggagaaaggagaggacattgcttctccgaatattcaaatcttcaatgccaaaagattggatacctgactcctcttaa

Protein Analysis

2094

Amino Acids

241.45

Weight (kDa)

8.87

Isoelectric Point (pI)

41.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 1205, 1842, 2477, 2957, 4316
AasI GACNNNNNNGTC 1 cut(s) 858
AatII GACGTC 2 cut(s) 1584, 4555
Acc36I ACCTGC 2 cut(s) 502, 3345
Acc65I GGTACC 1 cut(s) 490
AccB1I GGYRCC 1 cut(s) 490
AccB7I CCANNNNNTGG 4 cut(s) 1099, 3154, 5535, 5934
AccBSI CCGCTC 1 cut(s) 6143
AccI GTMKAC 4 cut(s) 716, 2787, 2797, 5380
AccII CGCG 1 cut(s) 34
AclWI GGATC 9 cut(s) 245, 258, 1561, 2048, 2529, 4582, 4837, 5150, 6095
AcoI YGGCCR 7 cut(s) 35, 438, 1337, 2980, 4189, 4849, 6126
AcuI CTGAAG 8 cut(s) 552, 1570, 1786, 2272, 2334, 3705, 5444, 5928
AcyI GRCGYC 5 cut(s) 1581, 2748, 4447, 4552, 5970
AdeI CACNNNGTG 4 cut(s) 2416, 4918, 5535, 5777
AfeI AGCGCT 1 cut(s) 639
AflII CTTAAG 3 cut(s) 4264, 5854, 6167
AflIII ACRYGT 1 cut(s) 3748
AjiI CACGTC 1 cut(s) 269
AjnI CCWGG 8 cut(s) 440, 1218, 2214, 3372, 3522, 3868, 4590, 5033
AjuI GAANNNNNNNTTGG 2 cut(s) 2396, 2428
AloI GAACNNNNNNTCC 2 cut(s) 258, 290
Alw21I GWGCWC 4 cut(s) 11, 480, 649, 5352
Alw26I GTCTC 4 cut(s) 2702, 3687, 4118, 5692
AlwI GGATC 9 cut(s) 245, 258, 1561, 2048, 2529, 4582, 4837, 5150, 6095
AlwNI CAGNNNCTG 2 cut(s) 1225, 1727
Ama87I CYCGRG 1 cut(s) 3690
Aor51HI AGCGCT 1 cut(s) 639
ArsI GACNNNNNNTTYG 4 cut(s) 258, 280, 290, 312
AseI ATTAAT 1 cut(s) 2820
Asp700I GAANNNNTTC 3 cut(s) 1799, 3273, 4090
Asp718I GGTACC 1 cut(s) 490
AspA2I CCTAGG 1 cut(s) 197
AspLEI GCGC 6 cut(s) 34, 241, 640, 1941, 3171, 5431
AspS9I GGNCC 7 cut(s) 18, 1401, 2328, 3376, 3872, 4675, 5835
AsuC2I CCSGG 1 cut(s) 167
AsuHPI GGTGA 7 cut(s) 1055, 3677, 3842, 3902, 4742, 5139, 5842
AsuII TTCGAA 1 cut(s) 2434
AsuNHI GCTAGC 3 cut(s) 2062, 2588, 2884
AvaI CYCGRG 1 cut(s) 3690
AvaII GGWCC 6 cut(s) 18, 1401, 2328, 3376, 3872, 4675
AvrII CCTAGG 1 cut(s) 197
BaeGI GKGCMC 3 cut(s) 3147, 3613, 5542
BaeI ACNNNNGTAYC 2 cut(s) 474, 507
BalI TGGCCA 4 cut(s) 440, 1339, 2982, 4191
BamHI GGATCC 1 cut(s) 250
BanI GGYRCC 1 cut(s) 490
BanII GRGCYC 2 cut(s) 11, 1969
BauI CACGAG 1 cut(s) 3933
BbsI GAAGAC 6 cut(s) 1576, 1921, 2002, 2502, 3782, 5641
Bbv12I GWGCWC 4 cut(s) 11, 480, 649, 5352
BceAI ACGGC 6 cut(s) 118, 4410, 4836, 5648, 5849, 6113
BciT130I CCWGG 8 cut(s) 442, 1220, 2216, 3374, 3524, 3870, 4592, 5035
BciVI GTATCC 4 cut(s) 1374, 3530, 3747, 6261
BclI TGATCA 2 cut(s) 2502, 2973
BcnI CCSGG 1 cut(s) 167
BcoDI GTCTC 4 cut(s) 2702, 3687, 4118, 5692
BfoI RGCGCY 2 cut(s) 641, 5432
BfrI CTTAAG 3 cut(s) 4264, 5854, 6167
BfuAI ACCTGC 2 cut(s) 502, 3345
BfuI GTATCC 4 cut(s) 1374, 3530, 3747, 6261
BlnI CCTAGG 1 cut(s) 197
BlpI GCTNAGC 1 cut(s) 1968
Bme1390I CCNGG 9 cut(s) 167, 442, 1220, 2216, 3374, 3524, 3870, 4592, 5035
Bme18I GGWCC 6 cut(s) 18, 1401, 2328, 3376, 3872, 4675
BmeT110I CYCGRG 1 cut(s) 3690
BmgBI CACGTC 1 cut(s) 269
BmgT120I GGNCC 7 cut(s) 18, 1401, 2328, 3376, 3872, 4675, 5835
BmiI GGNNCC 9 cut(s) 19, 252, 492, 974, 1869, 2284, 5678, 5742, 5837
BmrFI CCNGG 9 cut(s) 167, 442, 1220, 2216, 3374, 3524, 3870, 4592, 5035
BmrI ACTGGG 2 cut(s) 4670, 5747
BmtI GCTAGC 3 cut(s) 2066, 2592, 2888
BmuI ACTGGG 2 cut(s) 4670, 5747
BpiI GAAGAC 6 cut(s) 1576, 1921, 2002, 2502, 3782, 5641
BpmI CTGGAG 1 cut(s) 4724
Bpu10I CCTNAGC 1 cut(s) 479
Bpu1102I GCTNAGC 1 cut(s) 1968
Bpu14I TTCGAA 1 cut(s) 2434
BpuEI CTTGAG 2 cut(s) 3704, 5180
BpuMI CCSGG 1 cut(s) 167
BsaAI YACGTR 2 cut(s) 1175, 3749
BsaBI GATNNNNATC 2 cut(s) 2520, 5902
BsaHI GRCGYC 5 cut(s) 1581, 2748, 4447, 4552, 5970
BsaWI WCCGGW 2 cut(s) 427, 4082
BsaXI ACNNNNNCTCC 6 cut(s) 3026, 3056, 3221, 3251, 5631, 5661
Bse118I RCCGGY 1 cut(s) 5656
Bse3DI GCAATG 5 cut(s) 1017, 1138, 2190, 2442, 6224
Bse8I GATNNNNATC 2 cut(s) 2520, 5902
BseBI CCWGG 8 cut(s) 442, 1220, 2216, 3374, 3524, 3870, 4592, 5035
BseJI GATNNNNATC 2 cut(s) 2520, 5902
BseMI GCAATG 5 cut(s) 1017, 1138, 2190, 2442, 6224
BseMII CTCAG 9 cut(s) 493, 615, 855, 1672, 1982, 2471, 2728, 4160, 5703
BseRI GAGGAG 1 cut(s) 6268
BseSI GKGCMC 3 cut(s) 3147, 3613, 5542
BseX3I CGGCCG 1 cut(s) 35
BseYI CCCAGC 2 cut(s) 4600, 5611
Bsh1236I CGCG 1 cut(s) 34
Bsh1285I CGRYCG 1 cut(s) 38
BshNI GGYRCC 1 cut(s) 490
BsiEI CGRYCG 1 cut(s) 38
BsiHKAI GWGCWC 4 cut(s) 11, 480, 649, 5352
BsiHKCI CYCGRG 1 cut(s) 3690
BsiSI CCGG 4 cut(s) 166, 428, 4083, 5657
BslFI GGGAC 5 cut(s) 31, 329, 3468, 4981, 6124
BsmAI GTCTC 4 cut(s) 2702, 3687, 4118, 5692
BsmFI GGGAC 5 cut(s) 31, 329, 3468, 4981, 6124
BsmI GAATGC 9 cut(s) 687, 1079, 1369, 1672, 2001, 2170, 2705, 4473, 6179
BsoBI CYCGRG 1 cut(s) 3690
Bsp119I TTCGAA 1 cut(s) 2434
Bsp1286I GDGCHC 8 cut(s) 11, 480, 649, 1969, 3147, 3613, 5352, 5542
Bsp1407I TGTACA 2 cut(s) 895, 1227
Bsp1720I GCTNAGC 1 cut(s) 1968
Bsp19I CCATGG 4 cut(s) 223, 246, 4683, 5974
BspCNI CTCAG 9 cut(s) 492, 616, 856, 1671, 1981, 2470, 2727, 4161, 5702
BspFNI CGCG 1 cut(s) 34
BspHI TCATGA 3 cut(s) 3198, 4324, 5457
BspLI GGNNCC 9 cut(s) 19, 252, 492, 974, 1869, 2284, 5678, 5742, 5837
BspMAI CTGCAG 2 cut(s) 3342, 4755
BspMI ACCTGC 2 cut(s) 502, 3345
BspOI GCTAGC 3 cut(s) 2066, 2592, 2888
BspPI GGATC 9 cut(s) 245, 258, 1561, 2048, 2529, 4582, 4837, 5150, 6095
BspQI GCTCTTC 2 cut(s) 1670, 5611
BspT104I TTCGAA 1 cut(s) 2434
BspT107I GGYRCC 1 cut(s) 490
BspTI CTTAAG 3 cut(s) 4264, 5854, 6167
BsrBI CCGCTC 1 cut(s) 6143
BsrDI GCAATG 5 cut(s) 1017, 1138, 2190, 2442, 6224
BsrFI RCCGGY 1 cut(s) 5656
BsrGI TGTACA 2 cut(s) 895, 1227
BssAI RCCGGY 1 cut(s) 5656
BssNAI GTATAC 1 cut(s) 2798
BssNI GRCGYC 5 cut(s) 1581, 2748, 4447, 4552, 5970
BssSI CACGAG 1 cut(s) 3933
Bst1107I GTATAC 1 cut(s) 2798
Bst2BI CACGAG 1 cut(s) 3933
Bst2UI CCWGG 8 cut(s) 442, 1220, 2216, 3374, 3524, 3870, 4592, 5035
Bst6I CTCTTC 8 cut(s) 426, 1670, 1984, 3582, 5105, 5611, 5877, 6081
BstACI GRCGYC 5 cut(s) 1581, 2748, 4447, 4552, 5970
BstAFI CTTAAG 3 cut(s) 4264, 5854, 6167
BstAPI GCANNNNNTGC 2 cut(s) 298, 4880
BstAUI TGTACA 2 cut(s) 895, 1227
BstBAI YACGTR 2 cut(s) 1175, 3749
BstBI TTCGAA 1 cut(s) 2434
BstDSI CCRYGG 7 cut(s) 223, 246, 4683, 4852, 5212, 5974, 6184
BstFNI CGCG 1 cut(s) 34
BstH2I RGCGCY 2 cut(s) 641, 5432
BstHHI GCGC 6 cut(s) 34, 241, 640, 1941, 3171, 5431
BstMAI GTCTC 4 cut(s) 2702, 3687, 4118, 5692
BstMCI CGRYCG 1 cut(s) 38
BstNI CCWGG 8 cut(s) 442, 1220, 2216, 3374, 3524, 3870, 4592, 5035
BstNSI RCATGY 3 cut(s) 3208, 3235, 5244
BstSCI CCNGG 9 cut(s) 165, 440, 1218, 2214, 3372, 3522, 3868, 4590, 5033
BstSLI GKGCMC 3 cut(s) 3147, 3613, 5542
BstUI CGCG 1 cut(s) 34
BstV2I GAAGAC 6 cut(s) 1576, 1921, 2002, 2502, 3782, 5641
BstX2I RGATCY 6 cut(s) 250, 1553, 2521, 4587, 4829, 5142
BstXI CCANNNNNNTGG 2 cut(s) 4690, 6264
BstYI RGATCY 6 cut(s) 250, 1553, 2521, 4587, 4829, 5142
BstZ17I GTATAC 1 cut(s) 2798
BstZI CGGCCG 1 cut(s) 35
BsuI GTATCC 4 cut(s) 1374, 3530, 3747, 6261
BtgI CCRYGG 7 cut(s) 223, 246, 4683, 4852, 5212, 5974, 6184
BtrI CACGTC 1 cut(s) 269
BtsI GCAGTG 3 cut(s) 2015, 2697, 4719
BveI ACCTGC 2 cut(s) 502, 3345
CaiI CAGNNNCTG 2 cut(s) 1225, 1727
CciI TCATGA 3 cut(s) 3198, 4324, 5457
CciNI GCGGCCGC 1 cut(s) 35
CfoI GCGC 6 cut(s) 34, 241, 640, 1941, 3171, 5431
Cfr10I RCCGGY 1 cut(s) 5656
Cfr13I GGNCC 7 cut(s) 18, 1401, 2328, 3376, 3872, 4675, 5835
CseI GACGC 7 cut(s) 135, 298, 2756, 2906, 3569, 4436, 5959
CsiI ACCWGGT 1 cut(s) 1218
DraI TTTAAA 3 cut(s) 691, 1125, 5890
DraIII CACNNNGTG 4 cut(s) 2416, 4918, 5535, 5777
DrdI GACNNNNNNGTC 1 cut(s) 858
DseDI GACNNNNNNGTC 1 cut(s) 858
EaeI YGGCCR 7 cut(s) 35, 438, 1337, 2980, 4189, 4849, 6126
EagI CGGCCG 1 cut(s) 35
Eam1104I CTCTTC 8 cut(s) 426, 1670, 1984, 3582, 5105, 5611, 5877, 6081
EarI CTCTTC 8 cut(s) 426, 1670, 1984, 3582, 5105, 5611, 5877, 6081
EciI GGCGGA 1 cut(s) 1840
Ecl136II GAGCTC 1 cut(s) 9
EclXI CGGCCG 1 cut(s) 35
Eco24I GRGCYC 2 cut(s) 11, 1969
Eco32I GATATC 1 cut(s) 2944
Eco47I GGWCC 6 cut(s) 18, 1401, 2328, 3376, 3872, 4675
Eco47III AGCGCT 1 cut(s) 639
Eco52I CGGCCG 1 cut(s) 35
Eco53kI GAGCTC 1 cut(s) 9
Eco57I CTGAAG 8 cut(s) 552, 1570, 1786, 2272, 2334, 3705, 5444, 5928
Eco88I CYCGRG 1 cut(s) 3690
EcoICRI GAGCTC 1 cut(s) 9
EcoO109I RGGNCCY 1 cut(s) 3872
EcoRI GAATTC 2 cut(s) 3676, 5418
EcoRII CCWGG 8 cut(s) 440, 1218, 2214, 3372, 3522, 3868, 4590, 5033
EcoRV GATATC 1 cut(s) 2944
EcoT22I ATGCAT 2 cut(s) 1672, 2001
EcoT38I GRGCYC 2 cut(s) 11, 1969
FalI AAGNNNNNCTT 4 cut(s) 2396, 2428, 3261, 3293
FaqI GGGAC 5 cut(s) 31, 329, 3468, 4981, 6124
FauI CCCGC 1 cut(s) 8
FauNDI CATATG 2 cut(s) 1037, 1615
FbaI TGATCA 2 cut(s) 2502, 2973
FblI GTMKAC 4 cut(s) 716, 2787, 2797, 5380
FriOI GRGCYC 2 cut(s) 11, 1969
GlaI GCGC 6 cut(s) 33, 240, 639, 1940, 3170, 5430
GsaI CCCAGC 2 cut(s) 4604, 5615
GsuI CTGGAG 1 cut(s) 4724
HaeII RGCGCY 2 cut(s) 641, 5432
HapII CCGG 4 cut(s) 166, 428, 4083, 5657
HgaI GACGC 7 cut(s) 135, 298, 2756, 2906, 3569, 4436, 5959
HhaI GCGC 6 cut(s) 34, 241, 640, 1941, 3171, 5431
Hin1I GRCGYC 5 cut(s) 1581, 2748, 4447, 4552, 5970
Hin6I GCGC 6 cut(s) 32, 239, 638, 1939, 3169, 5429
HinP1I GCGC 6 cut(s) 32, 239, 638, 1939, 3169, 5429
HincII GTYRAC 2 cut(s) 717, 3732
HindII GTYRAC 2 cut(s) 717, 3732
HindIII AAGCTT 5 cut(s) 1047, 3863, 3987, 5857, 6170
HpaI GTTAAC 1 cut(s) 3732
HpaII CCGG 4 cut(s) 166, 428, 4083, 5657
HphI GGTGA 7 cut(s) 1055, 3677, 3842, 3902, 4742, 5139, 5842
Hpy99I CGWCG 6 cut(s) 100, 110, 139, 3563, 4035, 4452
HpyCH4IV ACGT 7 cut(s) 268, 1174, 1581, 3734, 3748, 4552, 5006
HpySE526I ACGT 7 cut(s) 268, 1174, 1581, 3734, 3748, 4552, 5006
Hsp92I GRCGYC 5 cut(s) 1581, 2748, 4447, 4552, 5970
HspAI GCGC 6 cut(s) 32, 239, 638, 1939, 3169, 5429
KpnI GGTACC 1 cut(s) 494
Ksp22I TGATCA 2 cut(s) 2502, 2973
KspAI GTTAAC 1 cut(s) 3732
LguI GCTCTTC 2 cut(s) 1670, 5611
MabI ACCWGGT 1 cut(s) 1218
MaeII ACGT 7 cut(s) 268, 1174, 1581, 3734, 3748, 4552, 5006
MaeIII GTNAC 9 cut(s) 1687, 1945, 3227, 3704, 3830, 4135, 4516, 4910, 5341
MbiI CCGCTC 1 cut(s) 6143
MfeI CAATTG 2 cut(s) 1001, 3885
MflI RGATCY 6 cut(s) 250, 1553, 2521, 4587, 4829, 5142
MhlI GDGCHC 8 cut(s) 11, 480, 649, 1969, 3147, 3613, 5352, 5542
MlsI TGGCCA 4 cut(s) 440, 1339, 2982, 4191
MluNI TGGCCA 4 cut(s) 440, 1339, 2982, 4191
MlyI GAGTC 8 cut(s) 300, 1552, 1822, 2197, 2348, 3247, 4968, 6269
Mox20I TGGCCA 4 cut(s) 440, 1339, 2982, 4191
Mph1103I ATGCAT 2 cut(s) 1672, 2001
MroXI GAANNNNTTC 3 cut(s) 1799, 3273, 4090
MscI TGGCCA 4 cut(s) 440, 1339, 2982, 4191
MslI CAYNNNNRTG 9 cut(s) 1374, 1607, 2004, 2239, 3140, 3203, 3959, 4688, 4742
Msp20I TGGCCA 4 cut(s) 440, 1339, 2982, 4191
MspA1I CMGCKG 4 cut(s) 15, 4042, 4750, 4756
MspCI CTTAAG 3 cut(s) 4264, 5854, 6167
MspI CCGG 4 cut(s) 166, 428, 4083, 5657
MspR9I CCNGG 9 cut(s) 167, 442, 1220, 2216, 3374, 3524, 3870, 4592, 5035
MunI CAATTG 2 cut(s) 1001, 3885
Mva1269I GAATGC 9 cut(s) 687, 1079, 1369, 1672, 2001, 2170, 2705, 4473, 6179
MvaI CCWGG 8 cut(s) 442, 1220, 2216, 3374, 3524, 3870, 4592, 5035
MvnI CGCG 1 cut(s) 34
NciI CCSGG 1 cut(s) 167
NcoI CCATGG 4 cut(s) 223, 246, 4683, 5974
NdeI CATATG 2 cut(s) 1037, 1615
NheI GCTAGC 3 cut(s) 2062, 2588, 2884
NlaIV GGNNCC 9 cut(s) 19, 252, 492, 974, 1869, 2284, 5678, 5742, 5837
NmeAIII GCCGAG 1 cut(s) 2666
NmuCI GTSAC 6 cut(s) 1687, 1945, 3227, 3830, 4135, 4910
NotI GCGGCCGC 1 cut(s) 35
NsiI ATGCAT 2 cut(s) 1672, 2001
NspI RCATGY 3 cut(s) 3208, 3235, 5244
NspV TTCGAA 1 cut(s) 2434
PagI TCATGA 3 cut(s) 3198, 4324, 5457
PciSI GCTCTTC 2 cut(s) 1670, 5611
PcsI WCGNNNNNNNCGW 3 cut(s) 143, 274, 315
PctI GAATGC 9 cut(s) 687, 1079, 1369, 1672, 2001, 2170, 2705, 4473, 6179
PdmI GAANNNNTTC 3 cut(s) 1799, 3273, 4090
PflMI CCANNNNNTGG 4 cut(s) 1099, 3154, 5535, 5934
PfoI TCCNGGA 3 cut(s) 3372, 3522, 4590
PleI GAGTC 8 cut(s) 300, 1551, 1821, 2197, 2347, 3247, 4967, 6269
PpsI GAGTC 8 cut(s) 300, 1551, 1821, 2197, 2347, 3247, 4967, 6269
Ppu21I YACGTR 2 cut(s) 1175, 3749
PpuMI RGGWCCY 1 cut(s) 3872
PshBI ATTAAT 1 cut(s) 2820
PsiI TTATAA 5 cut(s) 1205, 1842, 2477, 2957, 4316
Psp124BI GAGCTC 1 cut(s) 11
Psp5II RGGWCCY 1 cut(s) 3872
Psp6I CCWGG 8 cut(s) 440, 1218, 2214, 3372, 3522, 3868, 4590, 5033
PspFI CCCAGC 2 cut(s) 4600, 5611
PspGI CCWGG 8 cut(s) 440, 1218, 2214, 3372, 3522, 3868, 4590, 5033
PspN4I GGNNCC 9 cut(s) 19, 252, 492, 974, 1869, 2284, 5678, 5742, 5837
PspPI GGNCC 7 cut(s) 18, 1401, 2328, 3376, 3872, 4675, 5835
PspPPI RGGWCCY 1 cut(s) 3872
PstI CTGCAG 2 cut(s) 3342, 4755
PstNI CAGNNNCTG 2 cut(s) 1225, 1727
PsuI RGATCY 6 cut(s) 250, 1553, 2521, 4587, 4829, 5142
PvuII CAGCTG 2 cut(s) 4750, 4756
RseI CAYNNNNRTG 9 cut(s) 1374, 1607, 2004, 2239, 3140, 3203, 3959, 4688, 4742
SacI GAGCTC 1 cut(s) 11
SalI GTCGAC 1 cut(s) 715
SapI GCTCTTC 2 cut(s) 1670, 5611
Sau96I GGNCC 7 cut(s) 18, 1401, 2328, 3376, 3872, 4675, 5835
SchI GAGTC 8 cut(s) 300, 1552, 1822, 2197, 2348, 3247, 4968, 6269
ScrFI CCNGG 9 cut(s) 167, 442, 1220, 2216, 3374, 3524, 3870, 4592, 5035
SduI GDGCHC 8 cut(s) 11, 480, 649, 1969, 3147, 3613, 5352, 5542
SexAI ACCWGGT 1 cut(s) 1218
SfuI TTCGAA 1 cut(s) 2434
SinI GGWCC 6 cut(s) 18, 1401, 2328, 3376, 3872, 4675
SmiMI CAYNNNNRTG 9 cut(s) 1374, 1607, 2004, 2239, 3140, 3203, 3959, 4688, 4742
SmlI CTYRAG 5 cut(s) 3719, 4264, 5195, 5854, 6167
SmoI CTYRAG 5 cut(s) 3719, 4264, 5195, 5854, 6167
SspI AATATT 8 cut(s) 1569, 1698, 2179, 2253, 3715, 4056, 5845, 6240
SstI GAGCTC 1 cut(s) 11
StyD4I CCNGG 9 cut(s) 165, 440, 1218, 2214, 3372, 3522, 3868, 4590, 5033
TaiI ACGT 7 cut(s) 271, 1177, 1584, 3737, 3751, 4555, 5009
TatI WGTACW 7 cut(s) 463, 895, 1227, 2682, 3402, 3489, 4899
TauI GCSGC 5 cut(s) 37, 40, 219, 2095, 4236
TseFI GTSAC 6 cut(s) 1687, 1945, 3227, 3830, 4135, 4910
Tsp45I GTSAC 6 cut(s) 1687, 1945, 3227, 3830, 4135, 4910
Van91I CCANNNNNTGG 4 cut(s) 1099, 3154, 5535, 5934
Vha464I CTTAAG 3 cut(s) 4264, 5854, 6167
VpaK11BI GGWCC 6 cut(s) 18, 1401, 2328, 3376, 3872, 4675
VspI ATTAAT 1 cut(s) 2820
XbaI TCTAGA 2 cut(s) 3467, 3505
XceI RCATGY 3 cut(s) 3208, 3235, 5244
XcmI CCANNNNNNNNNTGG 1 cut(s) 5020
XmaJI CCTAGG 1 cut(s) 197
XmiI GTMKAC 4 cut(s) 716, 2787, 2797, 5380
XmnI GAANNNNTTC 3 cut(s) 1799, 3273, 4090
ZraI GACGTC 2 cut(s) 1582, 4553
Zsp2I ATGCAT 2 cut(s) 1672, 2001
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.