Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0002188

Physical Location & Seq

Genomic Coordinates Forward (+)

11043836 .. 11045987

Gene Structure 2152 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGCAGAACTCTTTTGGATCGATCATGGATACTGCGTATAAACCGAAGAACATCCTCCTTACTGGAGCTGCTGGCTTCATTGCTTCCCATGTTTGCAACCGGCTTATCCAGAACTACCCTGGCTACAAGATTGTAGTCCTTGACAAGCTTGATTACTGTTCAAATTTGAAGAACCTTAATCCTTCAAAGTCATCCCCCAACTTTAAGTTTATCAAGGGAGACATAGGCAGTGCCGATCTTGTCAACTTCATCCTTTTGACTGAGAACATTGATACAATAATGCACTTTGCAGCCCAGACCCATGTCGACAACTCTTTTGGTAACAGCTTTGAGTTCACCCAAAACAACATCTACGGTACACATGTTCTTCTAGAAGCATGCAAAGTCACCGGTCAGATCAAAAGATTTATTCATGTAAGCACAGACGAAGTCTACGGGGAGACAGATGAGGATGCTGTGGTGGGAAATCATGAGGCTTCTCAGCTTCTTCCGACAAACCCCTACTCTGCAACTAAAGCGGGAGCGGAGATGCTTGTTATGGCATATGGGCGTTCATATGGATTGCCTGTAATAACGACCAGAGGAAACAATGTTTATGGCCCCAACCAGTTCCCTGAAAAGATGATTCCAAAATTCATTCTCTTGGCTATGCAAGGGAAGCCTCTCCCGATTCATGGCGATGGATCCAATGTCAGAAGTTATCTCTATTGTGAGGATGTAGCAGAGGCATTTGAAGTCATTCTTCATAGGGGTGAGGTAGGCCATGTGTACAACATTGGGACGAAGAAAGAGAGGAGGGTGGTTGATGTGGCCAAGGAAATTTGCCAGCTATTTTCTCTGAACCCAGACACTCATGTAAAGTTTGTAGAGAACAGGCCTTTCAATGATCAGAGATATTTCTTGGATGACTCGAAGCTGAAAGGCTTGGGATGGTCAGAAAGGACTTTGTGGGAGGAGGGCTTGAGGAAGACCATGGAATGGTATGTCAAGAATCCCCAATGGTGGGGGGATGTTTCTGGGGCACTGCTCCCGCATCCAAGAATGCTCATGGTTCCTGGAATTGAAAGACAATTTGATGGTTCCGATACTGGCGATTCCGCTTACCCTTTGTCAGCAAGTGATTCTAGTCACAGCAAACTGGTCGTTCCAGCTCCAAGGAACATCCCATCTACTGAGAAGCCATCTCTAAAGTTTTTGATTTATGGTAAAACAGGGTGGATCGGAGGCCTTCTTGGGAAGATTTGTGAGAAGCAAGGGATATCGTATGAGTATGGACGAGGGCGTCTTCAGGAACGGTCACAGCTCATGGCTGATATTCTGCGTGTCAAACCAACCCATGTTTTCAATGCTGCTGGAGTGACTGGCAGACCCTATGTGGATTGGTGTGAATGTCATAAACCAGAAACAATTCGCACCAATGTTGTTGGTACATTAACCTTGGCTGATGTCTGCAGAGATCACGGCCTCCTAGTGGTGAATTATGCCACTGGTTGCATTTTCGAGTATGATGATGCCCATCCACCAAGATCAGGAATTGGGTTCAAGGAGGAAGACACACCCAATTTCGCAGGCTCATTTTATTCCAAAACCAAAGCCATGGTTGAAGAGCTTCTGAAGGAGTATGACAATGTTTGCACTCTTAGAGTTCGGATGCCAATATCATCTGATCTCAGCAATCCACGCAACTTCATCACAAAGATCTCGCGCTACAATAAAGTGGTCGACATTCCAAACAGCATGACCATCTTGGACGAGCTTCTACCCATTTCAATTGAGATGGCCAAGAGGAACTTGAGGGGCATCTGGAACTTCACAAACCCGGGCGTGGTAAGTCACAATGAAATCCTGGAGATGTACAAGAACTACATTGAACCCAGTTTCAAGTGGACCAATTTTACAGTGGAAGAACAAGCCAAGGTTATTGTTGCAGCAAGGAGTAACAATGAGATGGATGCATCAAAGCTGAAGAAAGAGTTCCCTGAACTGCTTCCGATTAAGGAATCGCTGATTAAATACGTGTTTGAACCCAACAAGAAAACATTTGCAGGTGGAGCAGCAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0006810 GO:0008150 GO:0008152 GO:0009058 GO:0009225 GO:0009226 GO:0009506 GO:0009812 GO:0009813 GO:0009914 GO:0009966 GO:0009987 GO:0010253 GO:0010280 GO:0010315 GO:0010646 GO:0010817 GO:0010928 GO:0016829 GO:0016835 GO:0016836 GO:0018130 GO:0019438 GO:0023051 GO:0030054 GO:0030154 GO:0032502 GO:0033478 GO:0034641 GO:0034654 GO:0042127 GO:0042440 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046148 GO:0046483 GO:0048583 GO:0048869 GO:0050377 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0051552 GO:0051553 GO:0051554 GO:0051555 GO:0055044 GO:0055086 GO:0060918 GO:0065007 GO:0065008 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00520 map00520

Pfam Domains

Protein Families

Epimerase GDP_Man_Dehyd

Protein Analysis

688

Amino Acids

77.21

Weight (kDa)

6.8

Isoelectric Point (pI)

33.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RmlD_sub_bind	PF04321	17 - 325	2.5e-13	RmlD substrate binding domain
Epimerase	PF01370	18 - 260	1.1e-56	NAD dependent epimerase/dehydratase family
Polysacc_synt_2	PF02719	18 - 292	3.2e-20	Polysaccharide biosynthesis protein
GDP_Man_Dehyd	PF16363	19 - 324	2.5e-64	GDP-mannose 4,6 dehydratase
3Beta_HSD	PF01073	20 - 243	3.8e-23	3-beta hydroxysteroid dehydrogenase/isomerase family
NAD_binding_4	PF07993	20 - 202	2.8e-18	Male sterility protein
RmlD_sub_bind	PF04321	397 - 567	9.1e-11	RmlD substrate binding domain
Epimerase	PF01370	426 - 561	2.9e-10	NAD dependent epimerase/dehydratase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53500 AT3G14790 AT3G14790
fragaria_vesca	FvH4_2g36650 FvH4_2g36650 FvH4_6g38080 FvH4_6g38080 FvH4_6g38080 FvH4_6g38080 FvH4_6g38080
malus_domestica	MD09G1154300.v1.1 MD09G1154700.v1.1 MD15G1106300.v1.1 MD17G1140800.v1.1
prunus_persica	Prupe.1G458500_v2.0.a1 Prupe.3G170800_v2.0.a1
pyrus_communis	pycom09g07360 pycom15g09690 pycom17g13400
rosa_chinensis	RchiOBHm_Chr2g0151131 RchiOBHm_Chr6g0305141
rosa_laevigata	RLG00000010914 RLG00000020533
rosa_multiflora	Rmu_sc0000061.1_g000019 Rmu_sc0032179.1_g000002
rosa_roxburghii	Rroxscaffold_2G00096710 Rroxscaffold_7G00163120
rosa_rugosa	Rorug02G0425000 Rorug02G0425100 Rorug06G0338000 Rorug06G0338100 Rorug06G0338200 Rorug06G0338300
rosa_samantha	Rh2AG485600 Rh2BG497500 Rh2CG471400 Rh2DG508500 Rh6AG449700 Rh6BG451700 Rh6CG463100 Rh6DG450100
rosa_wichuraiana	Rw2G039770 Rw6G039160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2036
AasI	GACNNNNNNGTC	1 cut(s)	1281
Acc36I	ACCTGC	1 cut(s)	2036
AccB7I	CCANNNNNTGG	1 cut(s)	978
AccBSI	CCGCTC	1 cut(s)	524
AccI	GTMKAC	3 cut(s)	306, 432, 1722
AccII	CGCG	1 cut(s)	1705
AciI	CCGC	4 cut(s)	518, 524, 1031, 1098
AclWI	GGATC	4 cut(s)	25, 678, 691, 1226
AcoI	YGGCCR	2 cut(s)	810, 1779
AcsI	RAATTY	3 cut(s)	163, 632, 819
AcuI	CTGAAG	3 cut(s)	1271, 1634, 1985
AcyI	GRCGYC	1 cut(s)	1282
AfaI	GTAC	4 cut(s)	358, 770, 1429, 1856
AfiI	CCNNNNNNNGG	7 cut(s)	674, 978, 1002, 1003, 1471, 1529, 1825
AflIII	ACRYGT	2 cut(s)	361, 2016
AgeI	ACCGGT	1 cut(s)	389
AjnI	CCWGG	3 cut(s)	118, 1054, 1845
Alw26I	GTCTC	2 cut(s)	213, 434
AlwI	GGATC	4 cut(s)	25, 678, 691, 1226
Ama87I	CYCGRG	1 cut(s)	1819
AoxI	GGCC	7 cut(s)	598, 760, 810, 875, 1225, 1462, 1779
ApeKI	GCWGC	5 cut(s)	68, 290, 1349, 1928, 2054
ApoI	RAATTY	3 cut(s)	163, 632, 819
ArsI	GACNNNNNNTTYG	2 cut(s)	299, 331
AsiGI	ACCGGT	1 cut(s)	389
Asp700I	GAANNNNTTC	5 cut(s)	738, 1407, 1608, 1973, 1986
AspLEI	GCGC	1 cut(s)	1707
AspS9I	GGNCC	2 cut(s)	599, 1887
AsuC2I	CCSGG	2 cut(s)	1820, 1821
AsuHPI	GGTGA	4 cut(s)	328, 379, 764, 1486
AvaI	CYCGRG	1 cut(s)	1819
AvaII	GGWCC	1 cut(s)	1887
BaeGI	GKGCMC	1 cut(s)	1024
BaeI	ACNNNNGTAYC	2 cut(s)	348, 381
BalI	TGGCCA	2 cut(s)	812, 1781
BamHI	GGATCC	1 cut(s)	683
BbsI	GAAGAC	3 cut(s)	974, 1277, 1557
BbvI	GCAGC	4 cut(s)	55, 302, 1336, 1940
BccI	CCATC	9 cut(s)	674, 924, 1070, 1174, 1189, 1524, 1751, 1771, 1942
BceAI	ACGGC	1 cut(s)	1477
BcgI	CGANNNNNNTGC	2 cut(s)	1123, 1157
BciT130I	CCWGG	3 cut(s)	120, 1056, 1847
BciVI	GTATCC	1 cut(s)	22
BclI	TGATCA	1 cut(s)	886
BcnI	CCSGG	2 cut(s)	1820, 1821
BcoDI	GTCTC	2 cut(s)	213, 434
BfaI	CTAG	3 cut(s)	371, 1125, 1469
BfmI	CTRYAG	1 cut(s)	1450
BfuAI	ACCTGC	1 cut(s)	2036
BfuI	GTATCC	1 cut(s)	22
BglII	AGATCT	1 cut(s)	1698
BisI	GCNGC	5 cut(s)	69, 291, 1350, 1929, 2055
BlsI	GCNGC	5 cut(s)	70, 292, 1351, 1930, 2056
Bme1390I	CCNGG	5 cut(s)	120, 1056, 1820, 1821, 1847
Bme18I	GGWCC	1 cut(s)	1887
BmeT110I	CYCGRG	1 cut(s)	1819
BmgT120I	GGNCC	2 cut(s)	599, 1887
BmiI	GGNNCC	4 cut(s)	601, 685, 1053, 1081
BmrFI	CCNGG	5 cut(s)	120, 1056, 1820, 1821, 1847
BmrI	ACTGGG	1 cut(s)	1869
BmsI	GCATC	8 cut(s)	442, 519, 1042, 1501, 1641, 1809, 1942, 1964
BmuI	ACTGGG	1 cut(s)	1869
BoxI	GACNNNNGTC	1 cut(s)	302
BpiI	GAAGAC	3 cut(s)	974, 1277, 1557
BpmI	CTGGAG	3 cut(s)	84, 1374, 1868
BpuEI	CTTGAG	2 cut(s)	982, 1813
BpuMI	CCSGG	2 cut(s)	1820, 1821
Bsa29I	ATCGAT	1 cut(s)	20
BsaAI	YACGTR	1 cut(s)	2017
BsaBI	GATNNNNATC	1 cut(s)	1515
BsaHI	GRCGYC	1 cut(s)	1282
BsaJI	CCNNGG	8 cut(s)	118, 813, 972, 1154, 1437, 1596, 1819, 1914
BsaWI	WCCGGW	1 cut(s)	389
Bsc4I	CCNNNNNNNGG	7 cut(s)	674, 978, 1002, 1003, 1471, 1529, 1825
Bse118I	RCCGGY	2 cut(s)	99, 389
Bse1I	ACTGG	7 cut(s)	67, 607, 1093, 1143, 1366, 1492, 1875
Bse3DI	GCAATG	1 cut(s)	78
Bse8I	GATNNNNATC	1 cut(s)	1515
BseBI	CCWGG	3 cut(s)	120, 1056, 1847
BseCI	ATCGAT	1 cut(s)	20
BseDI	CCNNGG	8 cut(s)	118, 813, 972, 1154, 1437, 1596, 1819, 1914
BseJI	GATNNNNATC	1 cut(s)	1515
BseLI	CCNNNNNNNGG	7 cut(s)	674, 978, 1002, 1003, 1471, 1529, 1825
BseMI	GCAATG	1 cut(s)	78
BseMII	CTCAG	4 cut(s)	252, 494, 1164, 1684
BseNI	ACTGG	7 cut(s)	67, 607, 1093, 1143, 1366, 1492, 1875
BseRI	GAGGAG	2 cut(s)	808, 968
BseSI	GKGCMC	1 cut(s)	1024
BseXI	GCAGC	4 cut(s)	55, 302, 1336, 1940
Bsh1236I	CGCG	1 cut(s)	1705
BshFI	GGCC	7 cut(s)	600, 762, 812, 877, 1227, 1464, 1781
BshTI	ACCGGT	1 cut(s)	389
BshVI	ATCGAT	1 cut(s)	20
BsiHKCI	CYCGRG	1 cut(s)	1819
BsiSI	CCGG	3 cut(s)	100, 390, 1820
BslFI	GGGAC	1 cut(s)	793
BslI	CCNNNNNNNGG	7 cut(s)	674, 978, 1002, 1003, 1471, 1529, 1825
BsmAI	GTCTC	2 cut(s)	213, 434
BsmFI	GGGAC	1 cut(s)	793
BsmI	GAATGC	1 cut(s)	1047
BsnI	GGCC	7 cut(s)	600, 762, 812, 877, 1227, 1464, 1781
BsoBI	CYCGRG	1 cut(s)	1819
Bsp1286I	GDGCHC	1 cut(s)	1024
Bsp1407I	TGTACA	2 cut(s)	768, 1854
Bsp19I	CCATGG	2 cut(s)	972, 1596
BspACI	CCGC	4 cut(s)	518, 524, 1031, 1098
BspANI	GGCC	7 cut(s)	600, 762, 812, 877, 1227, 1464, 1781
BspCNI	CTCAG	4 cut(s)	253, 493, 1165, 1683
BspDI	ATCGAT	1 cut(s)	20
BspFNI	CGCG	1 cut(s)	1705
BspHI	TCATGA	1 cut(s)	469
BspLI	GGNNCC	4 cut(s)	601, 685, 1053, 1081
BspMAI	CTGCAG	1 cut(s)	1454
BspMI	ACCTGC	1 cut(s)	2036
BspPI	GGATC	4 cut(s)	25, 678, 691, 1226
BspQI	GCTCTTC	1 cut(s)	1599
BsrBI	CCGCTC	1 cut(s)	524
BsrDI	GCAATG	1 cut(s)	78
BsrFI	RCCGGY	2 cut(s)	99, 389
BsrGI	TGTACA	2 cut(s)	768, 1854
BsrI	ACTGG	7 cut(s)	67, 607, 1093, 1143, 1366, 1492, 1875
BssAI	RCCGGY	2 cut(s)	99, 389
BssECI	CCNNGG	8 cut(s)	118, 813, 972, 1154, 1437, 1596, 1819, 1914
BssNI	GRCGYC	1 cut(s)	1282
BssT1I	CCWWGG	6 cut(s)	813, 972, 1154, 1437, 1596, 1914
Bst2UI	CCWGG	3 cut(s)	120, 1056, 1847
Bst4CI	ACNGT	4 cut(s)	158, 356, 1296, 1900
Bst6I	CTCTTC	1 cut(s)	1599
BstACI	GRCGYC	1 cut(s)	1282
BstAUI	TGTACA	2 cut(s)	768, 1854
BstBAI	YACGTR	1 cut(s)	2017
BstC8I	GCNNGC	4 cut(s)	73, 379, 827, 1570
BstDEI	CTNAG	5 cut(s)	261, 480, 1173, 1640, 1670
BstDSI	CCRYGG	2 cut(s)	972, 1596
BstFNI	CGCG	1 cut(s)	1705
BstHHI	GCGC	1 cut(s)	1707
BstMAI	GTCTC	2 cut(s)	213, 434
BstMWI	GCNNNNNNNGC	4 cut(s)	515, 658, 1680, 2051
BstNI	CCWGG	3 cut(s)	120, 1056, 1847
BstNSI	RCATGY	2 cut(s)	365, 381
BstPAI	GACNNNNGTC	1 cut(s)	302
BstSCI	CCNGG	5 cut(s)	118, 1054, 1818, 1819, 1845
BstSFI	CTRYAG	1 cut(s)	1450
BstSLI	GKGCMC	1 cut(s)	1024
BstUI	CGCG	1 cut(s)	1705
BstV1I	GCAGC	4 cut(s)	55, 302, 1336, 1940
BstV2I	GAAGAC	3 cut(s)	974, 1277, 1557
BstX2I	RGATCY	2 cut(s)	683, 1698
BstXI	CCANNNNNNTGG	1 cut(s)	1597
BstYI	RGATCY	2 cut(s)	683, 1698
Bsu15I	ATCGAT	1 cut(s)	20
BsuI	GTATCC	1 cut(s)	22
BsuRI	GGCC	7 cut(s)	600, 762, 812, 877, 1227, 1464, 1781
BsuTUI	ATCGAT	1 cut(s)	20
BtgI	CCRYGG	2 cut(s)	972, 1596
BtgZI	GCGATG	1 cut(s)	693
BtsI	GCAGTG	2 cut(s)	235, 1022
BtsIMutI	CAGTG	4 cut(s)	235, 1022, 1485, 1905
BveI	ACCTGC	1 cut(s)	2036
Cac8I	GCNNGC	4 cut(s)	73, 379, 827, 1570
CciI	TCATGA	1 cut(s)	469
CfoI	GCGC	1 cut(s)	1707
Cfr10I	RCCGGY	2 cut(s)	99, 389
Cfr13I	GGNCC	2 cut(s)	599, 1887
Cfr9I	CCCGGG	1 cut(s)	1819
ClaI	ATCGAT	1 cut(s)	20
CseI	GACGC	1 cut(s)	1271
Csp6I	GTAC	4 cut(s)	357, 769, 1428, 1855
CspAI	ACCGGT	1 cut(s)	389
CviQI	GTAC	4 cut(s)	357, 769, 1428, 1855
DdeI	CTNAG	5 cut(s)	261, 480, 1173, 1640, 1670
DrdI	GACNNNNNNGTC	1 cut(s)	1281
DseDI	GACNNNNNNGTC	1 cut(s)	1281
EaeI	YGGCCR	2 cut(s)	810, 1779
Eam1104I	CTCTTC	1 cut(s)	1599
EarI	CTCTTC	1 cut(s)	1599
Eco130I	CCWWGG	6 cut(s)	813, 972, 1154, 1437, 1596, 1914
Eco147I	AGGCCT	2 cut(s)	877, 1227
Eco32I	GATATC	1 cut(s)	1260
Eco47I	GGWCC	1 cut(s)	1887
Eco57I	CTGAAG	3 cut(s)	1271, 1634, 1985
Eco88I	CYCGRG	1 cut(s)	1819
EcoRII	CCWGG	3 cut(s)	118, 1054, 1845
EcoRV	GATATC	1 cut(s)	1260
EcoT14I	CCWWGG	6 cut(s)	813, 972, 1154, 1437, 1596, 1914
EcoT22I	ATGCAT	1 cut(s)	1957
ErhI	CCWWGG	6 cut(s)	813, 972, 1154, 1437, 1596, 1914
FalI	AAGNNNNNCTT	4 cut(s)	726, 758, 1775, 1807
FaqI	GGGAC	1 cut(s)	793
FauI	CCCGC	2 cut(s)	511, 1038
FauNDI	CATATG	2 cut(s)	544, 556
FbaI	TGATCA	1 cut(s)	886
FblI	GTMKAC	3 cut(s)	306, 432, 1722
Fnu4HI	GCNGC	5 cut(s)	69, 291, 1350, 1929, 2055
Fsp4HI	GCNGC	5 cut(s)	69, 291, 1350, 1929, 2055
FspBI	CTAG	3 cut(s)	371, 1125, 1469
GlaI	GCGC	1 cut(s)	1706
GluI	GCNGC	5 cut(s)	69, 291, 1350, 1929, 2055
GsuI	CTGGAG	3 cut(s)	84, 1374, 1868
HaeIII	GGCC	7 cut(s)	600, 762, 812, 877, 1227, 1464, 1781
HapII	CCGG	3 cut(s)	100, 390, 1820
HgaI	GACGC	1 cut(s)	1271
HhaI	GCGC	1 cut(s)	1707
Hin1I	GRCGYC	1 cut(s)	1282
Hin6I	GCGC	1 cut(s)	1705
HinP1I	GCGC	1 cut(s)	1705
HincII	GTYRAC	3 cut(s)	244, 307, 1723
HindII	GTYRAC	3 cut(s)	244, 307, 1723
HindIII	AAGCTT	1 cut(s)	146
HinfI	GANTC	7 cut(s)	625, 670, 908, 991, 1094, 1121, 2000
HpaII	CCGG	3 cut(s)	100, 390, 1820
HphI	GGTGA	4 cut(s)	328, 379, 764, 1486
Hpy166II	GTNNAC	8 cut(s)	244, 307, 336, 359, 433, 769, 1723, 1887
Hpy188III	TCNNGA	8 cut(s)	109, 371, 470, 667, 988, 1289, 1530, 1804
Hpy8I	GTNNAC	8 cut(s)	244, 307, 336, 359, 433, 769, 1723, 1887
HpyAV	CCTTC	3 cut(s)	192, 1238, 1609
HpyCH4III	ACNGT	4 cut(s)	158, 356, 1296, 1900
HpyCH4IV	ACGT	1 cut(s)	2016
HpyF10VI	GCNNNNNNNGC	4 cut(s)	515, 658, 1680, 2051
HpyF3I	CTNAG	5 cut(s)	261, 480, 1173, 1640, 1670
HpySE526I	ACGT	1 cut(s)	2016
Hsp92I	GRCGYC	1 cut(s)	1282
HspAI	GCGC	1 cut(s)	1705
Ksp22I	TGATCA	1 cut(s)	886
LguI	GCTCTTC	1 cut(s)	1599
LmnI	GCTCC	5 cut(s)	65, 521, 1032, 1156, 2051
Lsp1109I	GCAGC	4 cut(s)	55, 302, 1336, 1940
LweI	GCATC	8 cut(s)	442, 519, 1042, 1501, 1641, 1809, 1942, 1964
MaeI	CTAG	3 cut(s)	371, 1125, 1469
MaeII	ACGT	1 cut(s)	2016
MaeIII	GTNAC	7 cut(s)	320, 385, 1127, 1296, 1357, 1832, 1937
MbiI	CCGCTC	1 cut(s)	524
MfeI	CAATTG	1 cut(s)	1770
MflI	RGATCY	2 cut(s)	683, 1698
MhlI	GDGCHC	1 cut(s)	1024
MlsI	TGGCCA	2 cut(s)	812, 1781
MluNI	TGGCCA	2 cut(s)	812, 1781
MlyI	GAGTC	1 cut(s)	902
MmeI	TCCRAC	1 cut(s)	515
Mox20I	TGGCCA	2 cut(s)	812, 1781
Mph1103I	ATGCAT	1 cut(s)	1957
MroXI	GAANNNNTTC	5 cut(s)	738, 1407, 1608, 1973, 1986
MscI	TGGCCA	2 cut(s)	812, 1781
MseI	TTAA	6 cut(s)	177, 204, 1433, 1995, 2010, 2062
MslI	CAYNNNNRTG	2 cut(s)	678, 750
Msp20I	TGGCCA	2 cut(s)	812, 1781
MspI	CCGG	3 cut(s)	100, 390, 1820
MspR9I	CCNGG	5 cut(s)	120, 1056, 1820, 1821, 1847
MunI	CAATTG	1 cut(s)	1770
Mva1269I	GAATGC	1 cut(s)	1047
MvaI	CCWGG	3 cut(s)	120, 1056, 1847
MvnI	CGCG	1 cut(s)	1705
MwoI	GCNNNNNNNGC	4 cut(s)	515, 658, 1680, 2051
NciI	CCSGG	2 cut(s)	1820, 1821
NcoI	CCATGG	2 cut(s)	972, 1596
NdeI	CATATG	2 cut(s)	544, 556
NlaIV	GGNNCC	4 cut(s)	601, 685, 1053, 1081
NmuCI	GTSAC	5 cut(s)	385, 1127, 1296, 1357, 1832
NsiI	ATGCAT	1 cut(s)	1957
NspI	RCATGY	2 cut(s)	365, 381
PaeI	GCATGC	1 cut(s)	381
PagI	TCATGA	1 cut(s)	469
PaqCI	CACCTGC	1 cut(s)	2036
PceI	AGGCCT	2 cut(s)	877, 1227
PciI	ACATGT	1 cut(s)	361
PciSI	GCTCTTC	1 cut(s)	1599
PctI	GAATGC	1 cut(s)	1047
PdmI	GAANNNNTTC	5 cut(s)	738, 1407, 1608, 1973, 1986
PfeI	GAWTC	6 cut(s)	625, 670, 991, 1094, 1121, 2000
PflFI	GACNNNGTC	1 cut(s)	428
PflMI	CCANNNNNTGG	1 cut(s)	978
PfoI	TCCNGGA	2 cut(s)	1054, 1845
PinAI	ACCGGT	1 cut(s)	389
PkrI	GCNGC	5 cut(s)	70, 292, 1351, 1930, 2056
PleI	GAGTC	1 cut(s)	902
PpsI	GAGTC	1 cut(s)	902
Ppu21I	YACGTR	1 cut(s)	2017
PscI	ACATGT	1 cut(s)	361
PshAI	GACNNNNGTC	1 cut(s)	302
Psp6I	CCWGG	3 cut(s)	118, 1054, 1845
PspGI	CCWGG	3 cut(s)	118, 1054, 1845
PspN4I	GGNNCC	4 cut(s)	601, 685, 1053, 1081
PspPI	GGNCC	2 cut(s)	599, 1887
PstI	CTGCAG	1 cut(s)	1454
PsuI	RGATCY	2 cut(s)	683, 1698
PsyI	GACNNNGTC	1 cut(s)	428
RsaI	GTAC	4 cut(s)	358, 770, 1429, 1856
RsaNI	GTAC	4 cut(s)	357, 769, 1428, 1855
RseI	CAYNNNNRTG	2 cut(s)	678, 750
SalI	GTCGAC	2 cut(s)	305, 1721
SapI	GCTCTTC	1 cut(s)	1599
SaqAI	TTAA	6 cut(s)	177, 204, 1433, 1995, 2010, 2062
SatI	GCNGC	5 cut(s)	69, 291, 1350, 1929, 2055
Sau96I	GGNCC	2 cut(s)	599, 1887
SchI	GAGTC	1 cut(s)	902
ScrFI	CCNGG	5 cut(s)	120, 1056, 1820, 1821, 1847
SduI	GDGCHC	1 cut(s)	1024
SfaNI	GCATC	8 cut(s)	442, 519, 1042, 1501, 1641, 1809, 1942, 1964
SfcI	CTRYAG	1 cut(s)	1450
SinI	GGWCC	1 cut(s)	1887
SmaI	CCCGGG	1 cut(s)	1821
SmiMI	CAYNNNNRTG	2 cut(s)	678, 750
SmlI	CTYRAG	2 cut(s)	961, 1792
SmoI	CTYRAG	2 cut(s)	961, 1792
SphI	GCATGC	1 cut(s)	381
SseBI	AGGCCT	2 cut(s)	877, 1227
SsiI	CCGC	4 cut(s)	518, 524, 1031, 1098
SspMI	CTAG	3 cut(s)	371, 1125, 1469
StuI	AGGCCT	2 cut(s)	877, 1227
StyD4I	CCNGG	5 cut(s)	118, 1054, 1818, 1819, 1845
StyI	CCWWGG	6 cut(s)	813, 972, 1154, 1437, 1596, 1914
TaaI	ACNGT	4 cut(s)	158, 356, 1296, 1900
TaiI	ACGT	1 cut(s)	2019
TaqI	TCGA	5 cut(s)	20, 306, 911, 1500, 1722
TatI	WGTACW	2 cut(s)	768, 1854
TfiI	GAWTC	6 cut(s)	625, 670, 991, 1094, 1121, 2000
Tru1I	TTAA	6 cut(s)	177, 204, 1433, 1995, 2010, 2062
Tru9I	TTAA	6 cut(s)	177, 204, 1433, 1995, 2010, 2062
TscAI	CASTG	4 cut(s)	235, 1029, 1492, 1905
TseFI	GTSAC	5 cut(s)	385, 1127, 1296, 1357, 1832
TseI	GCWGC	5 cut(s)	68, 290, 1349, 1928, 2054
Tsp45I	GTSAC	5 cut(s)	385, 1127, 1296, 1357, 1832
TspDTI	ATGAA	9 cut(s)	67, 238, 401, 543, 625, 662, 734, 1678, 1854
TspMI	CCCGGG	1 cut(s)	1819
TspRI	CASTG	4 cut(s)	235, 1029, 1492, 1905
Tth111I	GACNNNGTC	1 cut(s)	428
Van91I	CCANNNNNTGG	1 cut(s)	978
VpaK11BI	GGWCC	1 cut(s)	1887
XapI	RAATTY	3 cut(s)	163, 632, 819
XbaI	TCTAGA	1 cut(s)	370
XceI	RCATGY	2 cut(s)	365, 381
XcmI	CCANNNNNNNNNTGG	2 cut(s)	116, 1897
XmaI	CCCGGG	1 cut(s)	1819
XmiI	GTMKAC	3 cut(s)	306, 432, 1722
XmnI	GAANNNNTTC	5 cut(s)	738, 1407, 1608, 1973, 1986
XspI	CTAG	3 cut(s)	371, 1125, 1469
Zsp2I	ATGCAT	1 cut(s)	1957

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.