Rw6G039160

rhamnose biosynthetic enzyme

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0002188
Physical Location & Seq
Reverse (-)
63182523 .. 63184804
2282 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G039160.1

Sequence Viewer

Length: 1983 bp
ATGGTATATGAAGCAACCCCCTATGCACCAAAGAACATCCTCATTACAGGTGCAGCGGGATTCATAGGCAGCCATGTTACCAACAGACTCATCAAGAACTACCCCAACTACAAGATTGTAGCTCTTGACAAGCTAGACTATTGCTCTAGCTTCAAGAACCTTCACCCTTGTAAAGCCTCACATAATTTTAAGTTCATCAAGGGAGACATTGCTTGTGCTGACCTAATCAATCACCTGTTGATGGTTGAGGAGATTGACACCATTATGCACTTTGCTGCACAGACCCATGTGGACAATTCGTTTGGGAACTCATTTGAGTTCACAAACAACAATGTTTATGGCACCCATGTGCTTCTAGAAGCTTGCAAGGTCACACAGAGAATCAAGAGGTTCATCCATGTTAGTACTGATGAGGTATATGGTGAGACTGATATGGCAACTGACATTGGAAATCCTGAGGCCTCTCAACTCCTCCCTACAAATCCTTACTCTGCCACGAAAGCCGGGGCTGAAATGTTGGTCATGGCATATCACAGATCTTATGACTTGCCTACAATAACAACTAGAGGTAACAATGTCTACGGGCCTCAACAATACCCCGAAAAGCTTATCCCGAAATTCATGCTGCTTGCTATGAAAGGCGAGAAATTGCCGATTCATGGTAATGGGTCAAATGTTAGAAGCTATTTGTATTGTGACGATGTTGCTGAGGCATTTGATGTGATTCTTCATAAGGGGGTAATTGGGCATGTGTATAACATTGGTACCAAAAAAGAAAGGTCAGTCATAGATGTGGCAGAGGATATTTGCAAGATGTTTGGTTTGGATCCAAAGGAAGCTATAGATTTTGTTCAAGATAGGCCTTTTAATGACCAAAGGTACTTCTTGGATGATCAAAAGCTGAAGAATTTGGGTTGGGAGGTGAAGACTAATTGGGAAATGGGGTTGAAGCTGACAATGGAGTGGTACACTAAGCACCCAAATTGGTGGGGAAATGTGGATGCTGCACTTCACCCCCACCCGAGTATTTCTGTGATTAATCACTGCAATGATGAAGCTTGGTTCTTTCAATACGGGTACACCAGGATGACTAGATCATGCAGTGACATTAGTAACAGCGGCGAATTAAAATTCTTGATATACGGAAGGACTGGTTGGATAGGAGGGTTATTAGGGAAGCTTTGTAAGGATGGAGGAATTGAGTTTGAGTATGGGAAGGGAAGATTGGAAGATAAGAAGTCTTTGCTAGAGGACATAACCAGAGCAACACCAACCCATGTTTTCAATGCAGCTGGAATTACTGGAAGGCCTAATGTTGATTGGTGTGAGTCACACAAGACTGAAACAATTAGGACTAATGTAGTTGGGACACTTACTTTGGCTGATGTTTGTAAGGAACAAGGTTTGTTAATGATGAATTTCGCAACCGGCTGCATATTTGAGTATGACAAGGATCACCCTCGAGGATCAGGCATTGGATTCAAGGAGGAGGACAAACCTAATTTCACTGGTTCCTTCTATTCCAAGACCAAAGCCATGGTTGAGGAGTTGTTAAAGGAATATGACAATGTGTGCACTCTGAGAGTTAGAATGCCGATTTCATCAGACCTCAGCAACTCAAGAAACTTCATCACAAAGATCTCGCGTTACAACAAAGTGGTGAACATACCCAATAGTATGACCGTGCTTGATGAGCTCCTACCGATCTCCATTGAAATGGCTAGGAGAAACTGCCGAGGAATATGGAACTTCACCAACCCAGGAGTCATAAGCCACAATGAGATTCTAGAGATGTATAGGGATTACATTGACCCTAAGTTCAAGTGGCAAAATTTTGACCTAGAAGAACAAGCCAAGGTGATTGTAGCACCAAGGAGTAACAATGAAATGGATGCTTCAAAGCTGAAAGGGCAGTTTCCTGAATTGTTATCCATCAAAGATTCGATCAAAAAATATGTCTTCGAGGCTAACAAGAAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00520 map00520
Pfam Domains
Protein Families
Epimerase GDP_Man_Dehyd

Protein Analysis

660

Amino Acids

75.06

Weight (kDa)

6.48

Isoelectric Point (pI)

24.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RmlD_sub_bind PF04321 12 - 320 2.4e-15 RmlD substrate binding domain
Epimerase PF01370 13 - 255 1.1e-54 NAD dependent epimerase/dehydratase family
Polysacc_synt_2 PF02719 13 - 279 2.8e-19 Polysaccharide biosynthesis protein
GDP_Man_Dehyd PF16363 14 - 317 2e-66 GDP-mannose 4,6 dehydratase
3Beta_HSD PF01073 14 - 239 1.3e-24 3-beta hydroxysteroid dehydrogenase/isomerase family
NAD_binding_4 PF07993 15 - 218 2.2e-18 Male sterility protein
RmlD_sub_bind PF04321 377 - 546 4.7e-11 RmlD substrate binding domain
Epimerase PF01370 406 - 528 5e-11 NAD dependent epimerase/dehydratase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1461
Acc65I GGTACC 1 cut(s) 764
AccB1I GGYRCC 2 cut(s) 341, 764
AccI GTMKAC 1 cut(s) 579
AccII CGCG 1 cut(s) 1645
AciI CCGC 2 cut(s) 56, 1119
AclWI GGATC 4 cut(s) 821, 834, 1461, 1474
AcsI RAATTY 5 cut(s) 617, 907, 1130, 1417, 1831
AcuI CTGAAG 1 cut(s) 923
AfaI GTAC 5 cut(s) 406, 766, 881, 968, 1079
AfiI CCNNNNNNNGG 2 cut(s) 241, 659
AgsI TTSAA 9 cut(s) 154, 854, 949, 1070, 1285, 1483, 1715, 1822, 1899
AjnI CCWGG 2 cut(s) 1082, 1759
AjuI GAANNNNNNNTTGG 4 cut(s) 1138, 1170, 1208, 1240
AleI CACNNNNGTG 1 cut(s) 347
Alw21I GWGCWC 2 cut(s) 1577, 1698
Alw26I GTCTC 2 cut(s) 198, 419
Alw44I GTGCAC 1 cut(s) 1573
AlwI GGATC 4 cut(s) 821, 834, 1461, 1474
Ama87I CYCGRG 2 cut(s) 1021, 1461
AoxI GGCC 4 cut(s) 459, 584, 860, 1307
ApaLI GTGCAC 1 cut(s) 1573
ApeKI GCWGC 7 cut(s) 53, 69, 275, 625, 1004, 1289, 1431
ApoI RAATTY 5 cut(s) 617, 907, 1130, 1417, 1831
ArsI GACNNNNNNTTYG 6 cut(s) 284, 316, 1360, 1392, 1941, 1973
AseI ATTAAT 1 cut(s) 1038
Asp718I GGTACC 1 cut(s) 764
AspS9I GGNCC 1 cut(s) 584
AsuC2I CCSGG 1 cut(s) 505
AsuHPI GGTGA 9 cut(s) 155, 224, 434, 934, 1004, 1448, 1672, 1744, 1870
AvaI CYCGRG 2 cut(s) 1021, 1461
AxyI CCTNAGG 1 cut(s) 456
BaeGI GKGCMC 1 cut(s) 1577
BaeI ACNNNNGTAYC 2 cut(s) 748, 781
BamHI GGATCC 1 cut(s) 826
BanI GGYRCC 2 cut(s) 341, 764
BanII GRGCYC 1 cut(s) 1698
BbsI GAAGAC 2 cut(s) 932, 1951
Bbv12I GWGCWC 2 cut(s) 1577, 1698
BbvCI CCTCAGC 2 cut(s) 708, 1610
BbvI GCAGC 7 cut(s) 65, 81, 262, 612, 991, 1301, 1418
BccI CCATC 3 cut(s) 235, 1184, 1940
BcgI CGANNNNNNTGC 2 cut(s) 604, 638
BciT130I CCWGG 2 cut(s) 1084, 1761
BclI TGATCA 1 cut(s) 892
BcnI CCSGG 1 cut(s) 505
BcoDI GTCTC 2 cut(s) 198, 419
BfaI CTAG 9 cut(s) 134, 147, 356, 564, 1092, 1247, 1722, 1787, 1841
BfmI CTRYAG 1 cut(s) 840
BglII AGATCT 2 cut(s) 536, 1638
BisI GCNGC 8 cut(s) 54, 70, 276, 626, 1005, 1120, 1290, 1432
BlsI GCNGC 8 cut(s) 55, 71, 277, 627, 1006, 1121, 1291, 1433
BmcAI AGTACT 1 cut(s) 406
Bme1390I CCNGG 3 cut(s) 505, 1084, 1761
BmeT110I CYCGRG 2 cut(s) 1021, 1461
BmgT120I GGNCC 1 cut(s) 584
BmiI GGNNCC 4 cut(s) 343, 766, 828, 1513
BmrFI CCNGG 3 cut(s) 505, 1084, 1761
BmsI GCATC 2 cut(s) 991, 1882
BpiI GAAGAC 2 cut(s) 932, 1951
Bpu10I CCTNAGC 2 cut(s) 708, 1610
BpuEI CTTGAG 1 cut(s) 1603
BpuMI CCSGG 1 cut(s) 505
BsaJI CCNNGG 6 cut(s) 504, 1536, 1735, 1759, 1854, 1871
Bsc4I CCNNNNNNNGG 2 cut(s) 241, 659
Bse118I RCCGGY 1 cut(s) 1427
Bse1I ACTGG 3 cut(s) 1156, 1306, 1513
Bse21I CCTNAGG 1 cut(s) 456
Bse3DI GCAATG 2 cut(s) 207, 1054
BseBI CCWGG 2 cut(s) 1084, 1761
BseDI CCNNGG 6 cut(s) 504, 1536, 1735, 1759, 1854, 1871
BseGI GGATG 7 cut(s) 36, 393, 895, 1006, 1092, 1195, 1897
BseLI CCNNNNNNNGG 2 cut(s) 241, 659
BseMI GCAATG 2 cut(s) 207, 1054
BseMII CTCAG 4 cut(s) 447, 699, 1571, 1624
BseNI ACTGG 3 cut(s) 1156, 1306, 1513
BseRI GAGGAG 4 cut(s) 263, 461, 1502, 1559
BseSI GKGCMC 1 cut(s) 1577
BseXI GCAGC 7 cut(s) 65, 81, 262, 612, 991, 1301, 1418
BsgI GTGCAG 3 cut(s) 72, 261, 990
Bsh1236I CGCG 1 cut(s) 1645
BshFI GGCC 4 cut(s) 461, 586, 862, 1309
BshNI GGYRCC 2 cut(s) 341, 764
BsiHKAI GWGCWC 2 cut(s) 1577, 1698
BsiHKCI CYCGRG 2 cut(s) 1021, 1461
BsiSI CCGG 2 cut(s) 504, 1428
BslFI GGGAC 1 cut(s) 1381
BslI CCNNNNNNNGG 2 cut(s) 241, 659
BsmAI GTCTC 2 cut(s) 198, 419
BsmFI GGGAC 1 cut(s) 1381
BsmI GAATGC 1 cut(s) 1596
BsnI GGCC 4 cut(s) 461, 586, 862, 1309
BsoBI CYCGRG 2 cut(s) 1021, 1461
Bsp1286I GDGCHC 2 cut(s) 1577, 1698
Bsp143I GATC 9 cut(s) 536, 826, 892, 1094, 1453, 1466, 1638, 1704, 1944
Bsp19I CCATGG 1 cut(s) 1536
BspACI CCGC 2 cut(s) 56, 1119
BspANI GGCC 4 cut(s) 461, 586, 862, 1309
BspCNI CTCAG 4 cut(s) 448, 700, 1572, 1623
BspFNI CGCG 1 cut(s) 1645
BspLI GGNNCC 4 cut(s) 343, 766, 828, 1513
BspPI GGATC 4 cut(s) 821, 834, 1461, 1474
BspT107I GGYRCC 2 cut(s) 341, 764
BsrDI GCAATG 2 cut(s) 207, 1054
BsrFI RCCGGY 1 cut(s) 1427
BsrI ACTGG 3 cut(s) 1156, 1306, 1513
BssAI RCCGGY 1 cut(s) 1427
BssECI CCNNGG 6 cut(s) 504, 1536, 1735, 1759, 1854, 1871
BssMI GATC 9 cut(s) 536, 826, 892, 1094, 1453, 1466, 1638, 1704, 1944
BssT1I CCWWGG 3 cut(s) 1536, 1854, 1871
Bst2UI CCWGG 2 cut(s) 1084, 1761
Bst4CI ACNGT 1 cut(s) 1684
Bst6I CTCTTC 1 cut(s) 1970
BstC8I GCNNGC 2 cut(s) 364, 630
BstDEI CTNAG 6 cut(s) 456, 708, 972, 1580, 1610, 1815
BstDSI CCRYGG 1 cut(s) 1536
BstF5I GGATG 7 cut(s) 36, 393, 895, 1006, 1092, 1195, 1897
BstFNI CGCG 1 cut(s) 1645
BstKTI GATC 9 cut(s) 539, 829, 895, 1097, 1456, 1469, 1641, 1707, 1947
BstMAI GTCTC 2 cut(s) 198, 419
BstMBI GATC 9 cut(s) 536, 826, 892, 1094, 1453, 1466, 1638, 1704, 1944
BstMWI GCNNNNNNNGC 3 cut(s) 500, 1693, 1909
BstNI CCWGG 2 cut(s) 1084, 1761
BstNSI RCATGY 1 cut(s) 752
BstSCI CCNGG 3 cut(s) 503, 1082, 1759
BstSFI CTRYAG 1 cut(s) 840
BstSLI GKGCMC 1 cut(s) 1577
BstUI CGCG 1 cut(s) 1645
BstV1I GCAGC 7 cut(s) 65, 81, 262, 612, 991, 1301, 1418
BstV2I GAAGAC 2 cut(s) 932, 1951
BstX2I RGATCY 3 cut(s) 536, 826, 1638
BstXI CCANNNNNNTGG 3 cut(s) 987, 1537, 1717
BstYI RGATCY 3 cut(s) 536, 826, 1638
Bsu36I CCTNAGG 1 cut(s) 456
BsuRI GGCC 4 cut(s) 461, 586, 862, 1309
BtgI CCRYGG 1 cut(s) 1536
BtsCI GGATG 7 cut(s) 36, 393, 895, 1006, 1092, 1195, 1897
BtsI GCAGTG 2 cut(s) 1042, 1108
BtsIMutI CAGTG 3 cut(s) 1042, 1108, 1506
Cac8I GCNNGC 2 cut(s) 364, 630
Cfr10I RCCGGY 1 cut(s) 1427
Cfr13I GGNCC 1 cut(s) 584
Csp6I GTAC 5 cut(s) 405, 765, 880, 967, 1078
CviQI GTAC 5 cut(s) 405, 765, 880, 967, 1078
DdeI CTNAG 6 cut(s) 456, 708, 972, 1580, 1610, 1815
DpnI GATC 9 cut(s) 538, 828, 894, 1096, 1455, 1468, 1640, 1706, 1946
DpnII GATC 9 cut(s) 536, 826, 892, 1094, 1453, 1466, 1638, 1704, 1944
Eam1104I CTCTTC 1 cut(s) 1970
EarI CTCTTC 1 cut(s) 1970
Ecl136II GAGCTC 1 cut(s) 1696
Eco130I CCWWGG 3 cut(s) 1536, 1854, 1871
Eco147I AGGCCT 3 cut(s) 461, 862, 1309
Eco24I GRGCYC 1 cut(s) 1698
Eco53kI GAGCTC 1 cut(s) 1696
Eco57I CTGAAG 1 cut(s) 923
Eco81I CCTNAGG 1 cut(s) 456
Eco88I CYCGRG 2 cut(s) 1021, 1461
EcoICRI GAGCTC 1 cut(s) 1696
EcoRII CCWGG 2 cut(s) 1082, 1759
EcoT14I CCWWGG 3 cut(s) 1536, 1854, 1871
EcoT38I GRGCYC 1 cut(s) 1698
ErhI CCWWGG 3 cut(s) 1536, 1854, 1871
FaqI GGGAC 1 cut(s) 1381
FauI CCCGC 1 cut(s) 49
FbaI TGATCA 1 cut(s) 892
FblI GTMKAC 1 cut(s) 579
Fnu4HI GCNGC 8 cut(s) 54, 70, 276, 626, 1005, 1120, 1290, 1432
FokI GGATG 7 cut(s) 23, 380, 902, 1013, 1099, 1202, 1904
FriOI GRGCYC 1 cut(s) 1698
Fsp4HI GCNGC 8 cut(s) 54, 70, 276, 626, 1005, 1120, 1290, 1432
FspBI CTAG 9 cut(s) 134, 147, 356, 564, 1092, 1247, 1722, 1787, 1841
GluI GCNGC 8 cut(s) 54, 70, 276, 626, 1005, 1120, 1290, 1432
HaeIII GGCC 4 cut(s) 461, 586, 862, 1309
HapII CCGG 2 cut(s) 504, 1428
HindIII AAGCTT 4 cut(s) 360, 605, 1056, 1178
HpaII CCGG 2 cut(s) 504, 1428
HphI GGTGA 9 cut(s) 155, 224, 434, 934, 1004, 1448, 1672, 1744, 1870
Hpy166II GTNNAC 7 cut(s) 292, 321, 580, 969, 1080, 1575, 1663
Hpy188I TCNGA 2 cut(s) 1581, 1606
Hpy8I GTNNAC 7 cut(s) 292, 321, 580, 969, 1080, 1575, 1663
HpyAV CCTTC 5 cut(s) 170, 1140, 1210, 1299, 1525
HpyCH4III ACNGT 1 cut(s) 1684
HpyF10VI GCNNNNNNNGC 3 cut(s) 500, 1693, 1909
HpyF3I CTNAG 6 cut(s) 456, 708, 972, 1580, 1610, 1815
KpnI GGTACC 1 cut(s) 768
Ksp22I TGATCA 1 cut(s) 892
Kzo9I GATC 9 cut(s) 536, 826, 892, 1094, 1453, 1466, 1638, 1704, 1944
LmnI GCTCC 1 cut(s) 1701
Lsp1109I GCAGC 7 cut(s) 65, 81, 262, 612, 991, 1301, 1418
LweI GCATC 2 cut(s) 991, 1882
MaeI CTAG 9 cut(s) 134, 147, 356, 564, 1092, 1247, 1722, 1787, 1841
MaeIII GTNAC 9 cut(s) 76, 370, 569, 695, 1103, 1112, 1329, 1646, 1877
MalI GATC 9 cut(s) 538, 828, 894, 1096, 1455, 1468, 1640, 1706, 1946
MboI GATC 9 cut(s) 536, 826, 892, 1094, 1453, 1466, 1638, 1704, 1944
MboII GAAGA 7 cut(s) 719, 916, 937, 1233, 1241, 1856, 1951
MflI RGATCY 3 cut(s) 536, 826, 1638
MhlI GDGCHC 2 cut(s) 1577, 1698
MlyI GAGTC 3 cut(s) 81, 1337, 1773
MmeI TCCRAC 1 cut(s) 1136
MseI TTAA 6 cut(s) 189, 867, 1038, 1127, 1409, 1553
MslI CAYNNNNRTG 7 cut(s) 263, 347, 663, 791, 1047, 1085, 1715
MspA1I CMGCKG 3 cut(s) 56, 1119, 1292
MspI CCGG 2 cut(s) 504, 1428
MspR9I CCNGG 3 cut(s) 505, 1084, 1761
Mva1269I GAATGC 1 cut(s) 1596
MvaI CCWGG 2 cut(s) 1084, 1761
MvnI CGCG 1 cut(s) 1645
MwoI GCNNNNNNNGC 3 cut(s) 500, 1693, 1909
NciI CCSGG 1 cut(s) 505
NcoI CCATGG 1 cut(s) 1536
NdeII GATC 9 cut(s) 536, 826, 892, 1094, 1453, 1466, 1638, 1704, 1944
NlaIV GGNNCC 4 cut(s) 343, 766, 828, 1513
NmeAIII GCCGAG 1 cut(s) 1760
NmuCI GTSAC 4 cut(s) 370, 695, 1103, 1329
NspI RCATGY 1 cut(s) 752
OliI CACNNNNGTG 1 cut(s) 347
PaeR7I CTCGAG 1 cut(s) 1461
PceI AGGCCT 3 cut(s) 461, 862, 1309
PctI GAATGC 1 cut(s) 1596
PfeI GAWTC 7 cut(s) 60, 381, 655, 724, 1479, 1783, 1940
PkrI GCNGC 8 cut(s) 55, 71, 277, 627, 1006, 1121, 1291, 1433
PleI GAGTC 3 cut(s) 81, 1336, 1772
PpsI GAGTC 3 cut(s) 81, 1336, 1772
PshBI ATTAAT 1 cut(s) 1038
Psp124BI GAGCTC 1 cut(s) 1698
Psp6I CCWGG 2 cut(s) 1082, 1759
PspGI CCWGG 2 cut(s) 1082, 1759
PspN4I GGNNCC 4 cut(s) 343, 766, 828, 1513
PspPI GGNCC 1 cut(s) 584
PspXI VCTCGAGB 1 cut(s) 1461
PsuI RGATCY 3 cut(s) 536, 826, 1638
PvuII CAGCTG 1 cut(s) 1292
RsaI GTAC 5 cut(s) 406, 766, 881, 968, 1079
RsaNI GTAC 5 cut(s) 405, 765, 880, 967, 1078
RseI CAYNNNNRTG 7 cut(s) 263, 347, 663, 791, 1047, 1085, 1715
SacI GAGCTC 1 cut(s) 1698
SaqAI TTAA 6 cut(s) 189, 867, 1038, 1127, 1409, 1553
SatI GCNGC 8 cut(s) 54, 70, 276, 626, 1005, 1120, 1290, 1432
Sau3AI GATC 9 cut(s) 536, 826, 892, 1094, 1453, 1466, 1638, 1704, 1944
Sau96I GGNCC 1 cut(s) 584
ScaI AGTACT 1 cut(s) 406
SchI GAGTC 3 cut(s) 81, 1337, 1773
ScrFI CCNGG 3 cut(s) 505, 1084, 1761
SduI GDGCHC 2 cut(s) 1577, 1698
SfaNI GCATC 2 cut(s) 991, 1882
SfcI CTRYAG 1 cut(s) 840
Sfr274I CTCGAG 1 cut(s) 1461
SlaI CTCGAG 1 cut(s) 1461
SmiMI CAYNNNNRTG 7 cut(s) 263, 347, 663, 791, 1047, 1085, 1715
SmlI CTYRAG 2 cut(s) 1461, 1618
SmoI CTYRAG 2 cut(s) 1461, 1618
SseBI AGGCCT 3 cut(s) 461, 862, 1309
SsiI CCGC 2 cut(s) 56, 1119
SspMI CTAG 9 cut(s) 134, 147, 356, 564, 1092, 1247, 1722, 1787, 1841
SstI GAGCTC 1 cut(s) 1698
StuI AGGCCT 3 cut(s) 461, 862, 1309
StyD4I CCNGG 3 cut(s) 503, 1082, 1759
StyI CCWWGG 3 cut(s) 1536, 1854, 1871
TaaI ACNGT 1 cut(s) 1684
TaqI TCGA 3 cut(s) 1462, 1943, 1962
TatI WGTACW 1 cut(s) 404
TauI GCSGC 1 cut(s) 1122
TfiI GAWTC 7 cut(s) 60, 381, 655, 724, 1479, 1783, 1940
Tru1I TTAA 6 cut(s) 189, 867, 1038, 1127, 1409, 1553
Tru9I TTAA 6 cut(s) 189, 867, 1038, 1127, 1409, 1553
TscAI CASTG 3 cut(s) 1049, 1108, 1513
TseFI GTSAC 4 cut(s) 370, 695, 1103, 1329
TseI GCWGC 7 cut(s) 53, 69, 275, 625, 1004, 1289, 1431
Tsp45I GTSAC 4 cut(s) 370, 695, 1103, 1329
TspGWI ACGGA 1 cut(s) 1158
TspRI CASTG 3 cut(s) 1049, 1108, 1513
VneI GTGCAC 1 cut(s) 1573
VspI ATTAAT 1 cut(s) 1038
XapI RAATTY 5 cut(s) 617, 907, 1130, 1417, 1831
XbaI TCTAGA 2 cut(s) 355, 1786
XceI RCATGY 1 cut(s) 752
XhoI CTCGAG 1 cut(s) 1461
XmiI GTMKAC 1 cut(s) 579
XspI CTAG 9 cut(s) 134, 147, 356, 564, 1092, 1247, 1722, 1787, 1841
ZrmI AGTACT 1 cut(s) 406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.