Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002188

Physical Location & Seq

Genomic Coordinates Reverse (-)

54631019 .. 54634244

Gene Structure 3226 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0425100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2952 bp

ATGGGACACAGTACTGCATTGTTCCTCCTCCTTTCATTTTTACTACTGTCAGGAACTTCATACCTTGACAGAGTCACACTTGGTTTCTGCAATGCAGATCCTAATGTGGGTTGCATGGATATCGAGAGGAAAGCCCTTCTAAAGCTCAGAGAGGGACTCACTGATCCTTCAGACCGGCTTTCATCTTGGGTTGGAGTAGATTGCTGCAAATGGAGAGGTATAGGCTGCAACAAGACAACTGGACGCGTGGACAGCCTTAATCTTCGCAACCCGTATGTAGATGTTTCGGAGAGTGATGATGGAACACTGCATGCTTTAGGAGGTGAGATCAATCCTTCATTGCTTGTTTTGAAAGATTTGGTTTACTTGGATTTGAGCATGAATAACTTTGGAGGTCTAGAACTTCCAAGTTTCATTGGATCACTAGAAAAAATAACATATCTCAATCTATCTGGTGCATCATTTGGTGGAGTAATTCCCGCCAATCTTGGAAACCTTTCAAAATTGCTTCATCTTGATCTCAGTAATAATGCTGTTGAGAGTGATCTCAGATGGCTTTCCAGTCTTTCTTCCTTACAGTTTCTTAACTTGGGAGGAGCATACCTTACCAAGGCTGCACCATATTGGCTTCCCACTGTTAATATGCTCCCTTCACTTCTTGAATTGCATTTGCCTGGTTGTGGACTTTCCATCCTTCCACCTACTCTTCCTCATATCAATTTCACATCACTTTTGGTTCTTGGCCTCTCTGCCAATGGTTTCAACTCCACACTTTCTCCCTGGTTGTTCAATCTGACTGAACTAGTCAGCCTTGACCTAAGTATGAACAATCTCAATGGAGAACTTCCAGAAACACTCGGGAGTAGTTTGACTCATCTGAAGAACCTTGATTTGTCAGAGAATTCAGATATCGGAGGTCAGTTGCCGAGAAACTTGGGAATGCTATGCAATTTGCAGTCTCTTGAACTTTCAATCAACAAAGTTACTGGTGAGATAACTGAGTTCATTGATAGTTTGTCTACATGCACAAACAGCAGCTTAGAGAGGTTGGATTTAGGTTATAACAGTCTGACAGGAAATTTGCCTAATTCATTGGGACTTCTTAAGAAGTTAAGACACCTCACGTTGTGGTCCAACTCATTTCAGGGTTCTATCCCAGAATCTATTGGAAACTTGACATCTTTGGAGGAATTTTACCTTGCAAGAAATAAACTGGGTGGAGTCATCCCAGAAAGTTTTGGGCAGCTCTCATCACTCGTTGCAGTAGATCTCTCTGAAAACACATGGGAAGGTGTTGTAACAGAAGCTCATTTTCTGAAACTTCGAAGCTTAAAAGATGTGTCAATCCAGAAAGCCTCCCCAAACATTTCCCTAGTTTTCAACATTAGTTCTAAATGGATACCTCCTTTCAAATTGAGATACTTGAACCTTAGATCATGTCAATTGGGTCCCAAATTTCCTGCATGGCTTAGAAATCAGACTGAGCTTGTCACGGTGGTCCTCAATAATGCTAAGATTGCAGATACCATACCAGATTGGTTTTGGCAGTTAGATTTGTTATTGGATGAACTAGATGTTGCTTACAATCAACTAGGCGGCAAGGTGCCCAACTCGCTAAGTTTCAGCTATCCTGCTAATGCTGATTTGAGTGCAAACATGTTTGAGGGCCCCCTCCCACTTTGGTCAAGAAACATTACAACGCTCTACCTCAGGGATAATTTGTTTTCAGGGCCAATTCCTTCAAACATTGGTGATGTGATGCCGTCCTTGTCAGATTTAGACATCTCTAGGAACGGTTTGAGTGGAAGCATTCCCCTGTCTTTAGGTAATCTAAGCCTACTGACAACCATGGTTCTCTCAAATAATTACTTGTCTGGTGAAATTCCTCATTTCTGGAACAATATACCATTCTTGTATATTGTAGATATGTCAAACAACAGCCTCTCTGGTACAATTCCAAGATCCATGGATTCTCTTGGTTCACTCTTGTACTTGATTCTCTCTAGTAACAACTTGTCAGGCGAACTTCCTTCATTGAGAAACTGCACTGGCATGAAGAGTCTTGATCTTGGGGAAAATAAGTTCTTTGGAAACATTCCGGCGTGGATAGGAGAAAGCATGCTCTCTTTGTTGATTTTACGCTTGAGTTCCAACTCATTCACCGGAAGCATTCCTTCAAACTTGTGTGGCCTTTCCAATCTTCACATATTGGACCTCTCACACAATAACCTGTCTGGTCATATTCCCCGCTGTGTTGGTAACTTGAGTGGCTTGAAAACATCTTTATTCTCAGATAAAGATACATCATACCTTTACCAGGGAAAGTTGAAGGTAGTGGCAAAAGGAAGAGTGCAAGACTTCGATCCCACTCTCTATCTTGTTAATAGCCTAGATCTCTCAAACAATAACTTATCAGGTGAGATGCCGAGGGAGCTCACGAGCCTGATAAAGTTGTGGACCTTGAATTTATCCATGAATCATCTGACAGGAGTAATGCCATCAAGGATTGGGAGCTTGGAGTCGCTAGAAACTCTTGATTTGTCAGTAAACCAGCTTTCAGGTTCCATTCCACAGAGTATGGTTTCATTGACATTCTTGAATCATCTAAACCTCTCATACAACAACTTGTCTGGGACAATCCCAACAGGCAACCAGTTTAACAGCCTGGTTGATCCATCAATATATGAAGGCAATACCGCTCTTTGTGGTTATCCGTTGCCTGATTGCCAAGTCAATGGTGGAACTCCTCAGGGTCCAATGGGAGGTGGAGAAGACAAAGCCTTTGAAATGTGGGGTTTCATCATCAGCATGGTGATCGGTTTCGTTATGGGGTTCTGGGGAGTTTGTGGGAGTTTGGTCATCAGCAAGTCTTGGAGGAAGACATATTTCCAGTTTACTGACAAAATGATTGTTGCTTGTATACGGAAATACCAGGGGGCACAGGAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0006810 GO:0008150 GO:0008152 GO:0009058 GO:0009225 GO:0009226 GO:0009506 GO:0009812 GO:0009813 GO:0009914 GO:0009966 GO:0009987 GO:0010253 GO:0010280 GO:0010315 GO:0010646 GO:0010817 GO:0010928 GO:0016829 GO:0016835 GO:0016836 GO:0018130 GO:0019438 GO:0023051 GO:0030054 GO:0030154 GO:0032502 GO:0033478 GO:0034641 GO:0034654 GO:0042127 GO:0042440 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046148 GO:0046483 GO:0048583 GO:0048869 GO:0050377 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0051552 GO:0051553 GO:0051554 GO:0051555 GO:0055044 GO:0055086 GO:0060918 GO:0065007 GO:0065008 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00520 map00520

Pfam Domains

Protein Families

Epimerase GDP_Man_Dehyd

Protein Analysis

983

Amino Acids

107.26

Weight (kDa)

5.19

Isoelectric Point (pI)

33.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	42 - 77	5.6e-11	Leucine rich repeat N-terminal domain
LRR_14	PF23598	346 - 494	4.4e-12	Leucine-rich repeat region
LRR_8	PF13855	370 - 427	1.7e-08	Leucine rich repeat
LRR_8	PF13855	685 - 744	7.5e-06	Leucine rich repeat
LRR_14	PF23598	797 - 873	2.4e-06	Leucine-rich repeat region
LRR_8	PF13855	818 - 876	2.4e-07	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53500 AT3G14790 AT3G14790
fragaria_vesca	FvH4_2g36650 FvH4_2g36650 FvH4_6g38080 FvH4_6g38080 FvH4_6g38080 FvH4_6g38080 FvH4_6g38080
malus_domestica	MD09G1154300.v1.1 MD09G1154700.v1.1 MD15G1106300.v1.1 MD17G1140800.v1.1
prunus_persica	Prupe.1G458500_v2.0.a1 Prupe.3G170800_v2.0.a1
pyrus_communis	pycom09g07360 pycom15g09690 pycom17g13400
rosa_chinensis	RchiOBHm_Chr2g0151131 RchiOBHm_Chr6g0305141
rosa_laevigata	RLG00000010914 RLG00000020533
rosa_multiflora	Rmu_sc0000061.1_g000019 Rmu_sc0032179.1_g000002
rosa_roxburghii	Rroxscaffold_2G00096710 Rroxscaffold_7G00163120
rosa_rugosa	Rorug02G0425000 Rorug02G0425100 Rorug06G0338000 Rorug06G0338100 Rorug06G0338200 Rorug06G0338300
rosa_samantha	Rh2AG485600 Rh2BG497500 Rh2CG471400 Rh2DG508500 Rh6AG449700 Rh6BG451700 Rh6CG463100 Rh6DG450100
rosa_wichuraiana	Rw2G039770 Rw6G039160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1062
AccB1I	GGYRCC	1 cut(s)	1603
AccBSI	CCGCTC	1 cut(s)	2699
AccI	GTMKAC	2 cut(s)	1019, 2920
AccII	CGCG	1 cut(s)	246
AciI	CCGC	4 cut(s)	480, 1596, 2248, 2697
AclWI	GGATC	6 cut(s)	92, 158, 427, 1956, 2357, 2666
AcsI	RAATTY	7 cut(s)	901, 1078, 1190, 1454, 1881, 2464, 2946
AcuI	CTGAAG	2 cut(s)	153, 899
AdeI	CACNNNGTG	1 cut(s)	1128
AfaI	GTAC	3 cut(s)	13, 1951, 1991
AfiI	CCNNNNNNNGG	5 cut(s)	107, 610, 680, 2317, 2762
AflII	CTTAAG	1 cut(s)	1103
AflIII	ACRYGT	2 cut(s)	244, 1656
AhlI	ACTAGT	1 cut(s)	802
AjnI	CCWGG	5 cut(s)	673, 779, 2316, 2664, 2931
AloI	GAACNNNNNNTCC	2 cut(s)	2066, 2098
Alw21I	GWGCWC	1 cut(s)	2436
Alw26I	GTCTC	1 cut(s)	963
AlwI	GGATC	6 cut(s)	92, 158, 427, 1956, 2357, 2666
Ama87I	CYCGRG	1 cut(s)	857
AoxI	GGCC	4 cut(s)	742, 1666, 1730, 2188
ApaI	GGGCCC	1 cut(s)	1670
ApeKI	GCWGC	5 cut(s)	204, 225, 614, 1035, 1243
ApoI	RAATTY	7 cut(s)	901, 1078, 1190, 1454, 1881, 2464, 2946
ArsI	GACNNNNNNTTYG	4 cut(s)	1063, 1095, 2765, 2797
Asp700I	GAANNNNTTC	1 cut(s)	496
AspS9I	GGNCC	9 cut(s)	1131, 1448, 1498, 1666, 1667, 1730, 2212, 2457, 2753
AsuHPI	GGTGA	7 cut(s)	335, 1001, 1763, 1889, 2152, 2429, 2824
AsuII	TTCGAA	1 cut(s)	1324
AvaI	CYCGRG	1 cut(s)	857
AvaII	GGWCC	6 cut(s)	1131, 1448, 1498, 2212, 2457, 2753
AxyI	CCTNAGG	2 cut(s)	1709, 2748
BaeGI	GKGCMC	3 cut(s)	1608, 1670, 2941
BanI	GGYRCC	1 cut(s)	1603
BanII	GRGCYC	2 cut(s)	1670, 2436
BauI	CACGAG	1 cut(s)	2437
BbsI	GAAGAC	2 cut(s)	2778, 2885
Bbv12I	GWGCWC	1 cut(s)	2436
BbvI	GCAGC	5 cut(s)	191, 212, 601, 1047, 1255
BccI	CCATC	5 cut(s)	293, 546, 698, 2506, 2683
BceAI	ACGGC	1 cut(s)	1747
BcgI	CGANNNNNNTGC	4 cut(s)	103, 137, 2797, 2831
BciT130I	CCWGG	5 cut(s)	675, 781, 2318, 2666, 2933
BciVI	GTATCC	1 cut(s)	1392
BcoDI	GTCTC	1 cut(s)	963
BcuI	ACTAGT	1 cut(s)	802
BfrI	CTTAAG	1 cut(s)	1103
BfuI	GTATCC	1 cut(s)	1392
BglII	AGATCT	2 cut(s)	1267, 2392
BisI	GCNGC	6 cut(s)	205, 226, 615, 1036, 1244, 1597
BlsI	GCNGC	6 cut(s)	206, 227, 616, 1037, 1245, 1598
BmcAI	AGTACT	1 cut(s)	13
Bme1390I	CCNGG	5 cut(s)	675, 781, 2318, 2666, 2933
Bme18I	GGWCC	6 cut(s)	1131, 1448, 1498, 2212, 2457, 2753
BmeT110I	CYCGRG	1 cut(s)	857
BmgT120I	GGNCC	9 cut(s)	1131, 1448, 1498, 1666, 1667, 1730, 2212, 2457, 2753
BmiI	GGNNCC	7 cut(s)	1449, 1450, 1605, 1668, 1669, 2563, 2754
BmrFI	CCNGG	5 cut(s)	675, 781, 2318, 2666, 2933
BmrI	ACTGGG	1 cut(s)	1223
BmsI	GCATC	3 cut(s)	467, 1749, 2412
BmuI	ACTGGG	1 cut(s)	1223
BpiI	GAAGAC	2 cut(s)	2778, 2885
BplI	GAGNNNNNCTC	2 cut(s)	141, 173
Bpu14I	TTCGAA	1 cut(s)	1324
BpuEI	CTTGAG	2 cut(s)	2164, 2284
BsaJI	CCNNGG	7 cut(s)	609, 779, 1848, 1965, 2317, 2426, 2932
BsaWI	WCCGGW	1 cut(s)	2162
BsaXI	ACNNNNNCTCC	2 cut(s)	760, 790
Bsc4I	CCNNNNNNNGG	5 cut(s)	107, 610, 680, 2317, 2762
Bse118I	RCCGGY	1 cut(s)	174
Bse1I	ACTGG	7 cut(s)	244, 561, 991, 1218, 2053, 2653, 2890
Bse21I	CCTNAGG	2 cut(s)	1709, 2748
Bse3DI	GCAATG	2 cut(s)	97, 338
BseBI	CCWGG	5 cut(s)	675, 781, 2318, 2666, 2933
BseDI	CCNNGG	7 cut(s)	609, 779, 1848, 1965, 2317, 2426, 2932
BseGI	GGATG	3 cut(s)	690, 1224, 1570
BseLI	CCNNNNNNNGG	5 cut(s)	107, 610, 680, 2317, 2762
BseMI	GCAATG	2 cut(s)	97, 338
BseMII	CTCAG	8 cut(s)	160, 535, 562, 990, 1473, 1723, 2304, 2762
BseNI	ACTGG	7 cut(s)	244, 561, 991, 1218, 2053, 2653, 2890
BseRI	GAGGAG	3 cut(s)	17, 609, 2736
BseSI	GKGCMC	3 cut(s)	1608, 1670, 2941
BseXI	GCAGC	5 cut(s)	191, 212, 601, 1047, 1255
BsgI	GTGCAG	2 cut(s)	600, 2029
Bsh1236I	CGCG	1 cut(s)	246
BshFI	GGCC	4 cut(s)	744, 1668, 1732, 2190
BshNI	GGYRCC	1 cut(s)	1603
BsiHKAI	GWGCWC	1 cut(s)	2436
BsiHKCI	CYCGRG	1 cut(s)	857
BsiSI	CCGG	3 cut(s)	175, 2099, 2163
BslFI	GGGAC	5 cut(s)	18, 168, 1110, 1434, 2647
BslI	CCNNNNNNNGG	5 cut(s)	107, 610, 680, 2317, 2762
BsmAI	GTCTC	1 cut(s)	963
BsmFI	GGGAC	5 cut(s)	18, 168, 1110, 1434, 2647
BsmI	GAATGC	3 cut(s)	945, 1809, 2169
BsnI	GGCC	4 cut(s)	744, 1668, 1732, 2190
BsoBI	CYCGRG	1 cut(s)	857
Bsp119I	TTCGAA	1 cut(s)	1324
Bsp120I	GGGCCC	1 cut(s)	1666
Bsp1286I	GDGCHC	4 cut(s)	1608, 1670, 2436, 2941
Bsp19I	CCATGG	2 cut(s)	1848, 1965
BspACI	CCGC	4 cut(s)	480, 1596, 2248, 2697
BspANI	GGCC	4 cut(s)	744, 1668, 1732, 2190
BspCNI	CTCAG	8 cut(s)	159, 534, 561, 991, 1474, 1722, 2303, 2761
BspFNI	CGCG	1 cut(s)	246
BspLI	GGNNCC	7 cut(s)	1449, 1450, 1605, 1668, 1669, 2563, 2754
BspPI	GGATC	6 cut(s)	92, 158, 427, 1956, 2357, 2666
BspT104I	TTCGAA	1 cut(s)	1324
BspT107I	GGYRCC	1 cut(s)	1603
BspTI	CTTAAG	1 cut(s)	1103
BsrBI	CCGCTC	1 cut(s)	2699
BsrDI	GCAATG	2 cut(s)	97, 338
BsrFI	RCCGGY	1 cut(s)	174
BsrI	ACTGG	7 cut(s)	244, 561, 991, 1218, 2053, 2653, 2890
BssAI	RCCGGY	1 cut(s)	174
BssECI	CCNNGG	7 cut(s)	609, 779, 1848, 1965, 2317, 2426, 2932
BssNAI	GTATAC	1 cut(s)	2921
BssSI	CACGAG	1 cut(s)	2437
BssT1I	CCWWGG	3 cut(s)	609, 1848, 1965
Bst1107I	GTATAC	1 cut(s)	2921
Bst2BI	CACGAG	1 cut(s)	2437
Bst2UI	CCWGG	5 cut(s)	675, 781, 2318, 2666, 2933
Bst4CI	ACNGT	7 cut(s)	11, 48, 579, 637, 1067, 1495, 1796
Bst6I	CTCTTC	3 cut(s)	711, 2051, 2341
BstAFI	CTTAAG	1 cut(s)	1103
BstBI	TTCGAA	1 cut(s)	1324
BstC8I	GCNNGC	2 cut(s)	312, 2120
BstDSI	CCRYGG	2 cut(s)	1848, 1965
BstENI	CCTNNNNNAGG	2 cut(s)	608, 2315
BstF5I	GGATG	3 cut(s)	690, 1224, 1570
BstFNI	CGCG	1 cut(s)	246
BstMAI	GTCTC	1 cut(s)	963
BstMWI	GCNNNNNNNGC	5 cut(s)	252, 1032, 1517, 1612, 2431
BstNI	CCWGG	5 cut(s)	675, 781, 2318, 2666, 2933
BstNSI	RCATGY	4 cut(s)	314, 1026, 1660, 2122
BstSCI	CCNGG	5 cut(s)	673, 779, 2316, 2664, 2931
BstSLI	GKGCMC	3 cut(s)	1608, 1670, 2941
BstUI	CGCG	1 cut(s)	246
BstV1I	GCAGC	5 cut(s)	191, 212, 601, 1047, 1255
BstV2I	GAAGAC	2 cut(s)	2778, 2885
BstX2I	RGATCY	4 cut(s)	97, 1267, 1961, 2392
BstXI	CCANNNNNNTGG	1 cut(s)	2735
BstYI	RGATCY	4 cut(s)	97, 1267, 1961, 2392
BstZ17I	GTATAC	1 cut(s)	2921
Bsu36I	CCTNAGG	2 cut(s)	1709, 2748
BsuI	GTATCC	1 cut(s)	1392
BsuRI	GGCC	4 cut(s)	744, 1668, 1732, 2190
BtgI	CCRYGG	2 cut(s)	1848, 1965
BtsCI	GGATG	3 cut(s)	690, 1224, 1570
BtsI	GCAGTG	1 cut(s)	305
BtsIMutI	CAGTG	4 cut(s)	159, 305, 633, 2046
Cac8I	GCNNGC	2 cut(s)	312, 2120
Cfr10I	RCCGGY	1 cut(s)	174
Cfr13I	GGNCC	9 cut(s)	1131, 1448, 1498, 1666, 1667, 1730, 2212, 2457, 2753
CseI	GACGC	1 cut(s)	252
Csp6I	GTAC	3 cut(s)	12, 1950, 1990
CviQI	GTAC	3 cut(s)	12, 1950, 1990
DraIII	CACNNNGTG	1 cut(s)	1128
Eam1104I	CTCTTC	3 cut(s)	711, 2051, 2341
EarI	CTCTTC	3 cut(s)	711, 2051, 2341
Ecl136II	GAGCTC	1 cut(s)	2434
Eco130I	CCWWGG	3 cut(s)	609, 1848, 1965
Eco24I	GRGCYC	2 cut(s)	1670, 2436
Eco32I	GATATC	2 cut(s)	121, 910
Eco47I	GGWCC	6 cut(s)	1131, 1448, 1498, 2212, 2457, 2753
Eco53kI	GAGCTC	1 cut(s)	2434
Eco57I	CTGAAG	2 cut(s)	153, 899
Eco81I	CCTNAGG	2 cut(s)	1709, 2748
Eco88I	CYCGRG	1 cut(s)	857
EcoICRI	GAGCTC	1 cut(s)	2434
EcoNI	CCTNNNNNAGG	2 cut(s)	608, 2315
EcoO109I	RGGNCCY	3 cut(s)	1448, 1666, 1667
EcoRI	GAATTC	1 cut(s)	901
EcoRII	CCWGG	5 cut(s)	673, 779, 2316, 2664, 2931
EcoRV	GATATC	2 cut(s)	121, 910
EcoT14I	CCWWGG	3 cut(s)	609, 1848, 1965
EcoT38I	GRGCYC	2 cut(s)	1670, 2436
ErhI	CCWWGG	3 cut(s)	609, 1848, 1965
FalI	AAGNNNNNCTT	2 cut(s)	2158, 2190
FaqI	GGGAC	5 cut(s)	18, 168, 1110, 1434, 2647
FauI	CCCGC	2 cut(s)	487, 2255
FblI	GTMKAC	2 cut(s)	1019, 2920
Fnu4HI	GCNGC	6 cut(s)	205, 226, 615, 1036, 1244, 1597
FokI	GGATG	3 cut(s)	677, 1211, 1577
FriOI	GRGCYC	2 cut(s)	1670, 2436
Fsp4HI	GCNGC	6 cut(s)	205, 226, 615, 1036, 1244, 1597
GluI	GCNGC	6 cut(s)	205, 226, 615, 1036, 1244, 1597
HaeIII	GGCC	4 cut(s)	744, 1668, 1732, 2190
HapII	CCGG	3 cut(s)	175, 2099, 2163
HgaI	GACGC	1 cut(s)	252
HindIII	AAGCTT	1 cut(s)	1327
HpaII	CCGG	3 cut(s)	175, 2099, 2163
HphI	GGTGA	7 cut(s)	335, 1001, 1763, 1889, 2152, 2429, 2824
Hpy166II	GTNNAC	9 cut(s)	250, 364, 683, 1020, 1982, 2457, 2548, 2895, 2921
Hpy8I	GTNNAC	9 cut(s)	250, 364, 683, 1020, 1982, 2457, 2548, 2895, 2921
HpyCH4III	ACNGT	7 cut(s)	11, 48, 579, 637, 1067, 1495, 1796
HpyCH4IV	ACGT	1 cut(s)	1124
HpyF10VI	GCNNNNNNNGC	5 cut(s)	252, 1032, 1517, 1612, 2431
HpySE526I	ACGT	1 cut(s)	1124
KflI	GGGWCCC	1 cut(s)	1448
LmnI	GCTCC	4 cut(s)	596, 651, 2431, 2511
Lsp1109I	GCAGC	5 cut(s)	191, 212, 601, 1047, 1255
LweI	GCATC	3 cut(s)	467, 1749, 2412
MaeII	ACGT	1 cut(s)	1124
MaeIII	GTNAC	6 cut(s)	73, 982, 1297, 1489, 2006, 2258
MbiI	CCGCTC	1 cut(s)	2699
MboII	GAAGA	9 cut(s)	254, 561, 698, 892, 2068, 2192, 2358, 2783, 2890
MfeI	CAATTG	1 cut(s)	1442
MflI	RGATCY	4 cut(s)	97, 1267, 1961, 2392
MhlI	GDGCHC	4 cut(s)	1608, 1670, 2436, 2941
MluI	ACGCGT	1 cut(s)	244
MlyI	GAGTC	6 cut(s)	81, 150, 865, 1230, 2068, 2528
MmeI	TCCRAC	4 cut(s)	172, 1029, 1158, 2175
MroXI	GAANNNNTTC	1 cut(s)	496
MseI	TTAA	9 cut(s)	258, 585, 639, 1104, 1112, 1331, 2382, 2658, 2950
MslI	CAYNNNNRTG	2 cut(s)	2051, 2807
MspA1I	CMGCKG	1 cut(s)	2250
MspCI	CTTAAG	1 cut(s)	1103
MspI	CCGG	3 cut(s)	175, 2099, 2163
MspR9I	CCNGG	5 cut(s)	675, 781, 2318, 2666, 2933
MunI	CAATTG	1 cut(s)	1442
Mva1269I	GAATGC	3 cut(s)	945, 1809, 2169
MvaI	CCWGG	5 cut(s)	675, 781, 2318, 2666, 2933
MvnI	CGCG	1 cut(s)	246
MwoI	GCNNNNNNNGC	5 cut(s)	252, 1032, 1517, 1612, 2431
NcoI	CCATGG	2 cut(s)	1848, 1965
NlaIV	GGNNCC	7 cut(s)	1449, 1450, 1605, 1668, 1669, 2563, 2754
NmeAIII	GCCGAG	2 cut(s)	951, 2451
NmuCI	GTSAC	2 cut(s)	73, 1489
NspI	RCATGY	4 cut(s)	314, 1026, 1660, 2122
NspV	TTCGAA	1 cut(s)	1324
PaeI	GCATGC	2 cut(s)	314, 2122
PciI	ACATGT	1 cut(s)	1656
PctI	GAATGC	3 cut(s)	945, 1809, 2169
PdmI	GAANNNNTTC	1 cut(s)	496
PfeI	GAWTC	5 cut(s)	1160, 1970, 1996, 2476, 2599
PflFI	GACNNNGTC	1 cut(s)	71
PkrI	GCNGC	6 cut(s)	206, 227, 616, 1037, 1245, 1598
PleI	GAGTC	6 cut(s)	80, 150, 865, 1229, 2067, 2527
PpsI	GAGTC	6 cut(s)	80, 150, 865, 1229, 2067, 2527
PpuMI	RGGWCCY	1 cut(s)	1448
PscI	ACATGT	1 cut(s)	1656
PsiI	TTATAA	1 cut(s)	1062
Psp124BI	GAGCTC	1 cut(s)	2436
Psp5II	RGGWCCY	1 cut(s)	1448
Psp6I	CCWGG	5 cut(s)	673, 779, 2316, 2664, 2931
PspGI	CCWGG	5 cut(s)	673, 779, 2316, 2664, 2931
PspN4I	GGNNCC	7 cut(s)	1449, 1450, 1605, 1668, 1669, 2563, 2754
PspOMI	GGGCCC	1 cut(s)	1666
PspPI	GGNCC	9 cut(s)	1131, 1448, 1498, 1666, 1667, 1730, 2212, 2457, 2753
PspPPI	RGGWCCY	1 cut(s)	1448
PsuI	RGATCY	4 cut(s)	97, 1267, 1961, 2392
PsyI	GACNNNGTC	1 cut(s)	71
RsaI	GTAC	3 cut(s)	13, 1951, 1991
RsaNI	GTAC	3 cut(s)	12, 1950, 1990
RseI	CAYNNNNRTG	2 cut(s)	2051, 2807
SacI	GAGCTC	1 cut(s)	2436
SaqAI	TTAA	9 cut(s)	258, 585, 639, 1104, 1112, 1331, 2382, 2658, 2950
SatI	GCNGC	6 cut(s)	205, 226, 615, 1036, 1244, 1597
Sau96I	GGNCC	9 cut(s)	1131, 1448, 1498, 1666, 1667, 1730, 2212, 2457, 2753
ScaI	AGTACT	1 cut(s)	13
SchI	GAGTC	6 cut(s)	81, 150, 865, 1230, 2068, 2528
ScrFI	CCNGG	5 cut(s)	675, 781, 2318, 2666, 2933
SduI	GDGCHC	4 cut(s)	1608, 1670, 2436, 2941
SfaNI	GCATC	3 cut(s)	467, 1749, 2412
SfuI	TTCGAA	1 cut(s)	1324
SinI	GGWCC	6 cut(s)	1131, 1448, 1498, 2212, 2457, 2753
SmiMI	CAYNNNNRTG	2 cut(s)	2051, 2807
SmlI	CTYRAG	3 cut(s)	1103, 2143, 2263
SmoI	CTYRAG	3 cut(s)	1103, 2143, 2263
SpeI	ACTAGT	1 cut(s)	802
SphI	GCATGC	2 cut(s)	314, 2122
SsiI	CCGC	4 cut(s)	480, 1596, 2248, 2697
SstI	GAGCTC	1 cut(s)	2436
StyD4I	CCNGG	5 cut(s)	673, 779, 2316, 2664, 2931
StyI	CCWWGG	3 cut(s)	609, 1848, 1965
TaaI	ACNGT	7 cut(s)	11, 48, 579, 637, 1067, 1495, 1796
TaiI	ACGT	1 cut(s)	1127
TaqI	TCGA	3 cut(s)	123, 1324, 2361
TatI	WGTACW	2 cut(s)	11, 1989
TauI	GCSGC	1 cut(s)	1599
TfiI	GAWTC	5 cut(s)	1160, 1970, 1996, 2476, 2599
Tru1I	TTAA	9 cut(s)	258, 585, 639, 1104, 1112, 1331, 2382, 2658, 2950
Tru9I	TTAA	9 cut(s)	258, 585, 639, 1104, 1112, 1331, 2382, 2658, 2950
TscAI	CASTG	4 cut(s)	166, 312, 640, 2053
TseFI	GTSAC	2 cut(s)	73, 1489
TseI	GCWGC	5 cut(s)	204, 225, 614, 1035, 1243
Tsp45I	GTSAC	2 cut(s)	73, 1489
TspGWI	ACGGA	2 cut(s)	2703, 2938
TspRI	CASTG	4 cut(s)	166, 312, 640, 2053
Tth111I	GACNNNGTC	1 cut(s)	71
Vha464I	CTTAAG	1 cut(s)	1103
VpaK11BI	GGWCC	6 cut(s)	1131, 1448, 1498, 2212, 2457, 2753
XagI	CCTNNNNNAGG	2 cut(s)	608, 2315
XapI	RAATTY	7 cut(s)	901, 1078, 1190, 1454, 1881, 2464, 2946
XbaI	TCTAGA	1 cut(s)	397
XceI	RCATGY	4 cut(s)	314, 1026, 1660, 2122
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1539, 2735
XmiI	GTMKAC	2 cut(s)	1019, 2920
XmnI	GAANNNNTTC	1 cut(s)	496
ZrmI	AGTACT	1 cut(s)	13

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.