pycom17g19330

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
17154584 .. 17156657
2074 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1449 bp
ATGTCTGGTTTAGCCGAACTTCCTCTCTCCTTAGTCGCCACTGATGAAATTCAAAAGGAGAGAGTGACGGAGACAGAGAGCGGAAGAGAGATGCCGAGGAACGAAGAGAAAGGGAGGTCAGTAAGGACGGCGTTGAGGGAGATATCGAACAACAATGGCGGCAGATGCGGCGGCGGAGTAAGGTTCTCTAAATTCTCCGCCACCGCGAAGAAGAAAGAAAAGGAAGGGCACAAGTTTAGGGTCGAAGAACATGATAAAGAAGAAAAGGACCACCAAAACGACGACGCTCTCGATCGGCTCCTGCTAGTTCAGTCCGATCTCTCTGCCCTAACTCACCAGCCATGGGTGCCCGGGTTTCAGAAGGCACTCTCCGATCCAATGGAGTATGCTGCAGATGAAGTCGAAAGGGTGGAGATTGAGAGTCCACAAGACTCCTTAATCTCTCCTTCCCCCCTTGTGTCCTGGCGCGCGGAGTGCACTATTGAAAGAGGGAGACATCTGTTTAAGCTAACCCCTCTTCCCATTTCAAAGTCTCTGTCATCCAGACTCCCGGTCCCTTCTAGGTCATCAGTCTTTGAGAGAATTACTTCGTGTACTGTCGATAGGATACCGAAGTTCAAAGCCACTTTCGGAGATGCAAATGATAATTCGCTTGAACTCGTGACAACAAAGTCAACTCCAAGTAAGCCTTCTGATTCAGTTGCTACTGAAGAAGGAAGCAGTCTTGAGCCTGAGTTTGTTTCTCCACCGCCAATGTTTCTGAAACAAGGGGGATCCATGGTTATGAATGTGATGACTCCATGCCTAAAAATGTCTCCTCCTAAATCATGTGTTATGCTCGAACCCATTTCGGAGTCTTCTCCCAAGGGTCGTCACGCGGTTCATAAATCCACTCCGTTTCCTGTTGGATTCACTTATTCCAGTGATTCCTCTGGCAACAAAGCTTCTGGGGATCTTGCTTTCAGGTATCCGGAGCTGTTGGCGCTACAACAGCCGTTCAAATCAGGAATTAGAAAGAACGATGTTGAATCATCACCAGAATGGTGCATATCGCCTCCCAAAACTTGTGTTTTACTTAATCCCCATGATGAAAAGTCTCCAGGCAATGCTGCTACTGATTTACAATTGCCAATTACTGGGCATCTTCTAGATAAGCAAATTAGTTTGTCTGTATCAAAAGAAAATGGTTTTCAAGGAGGCACTCACCCAATCAAGACATCTTGTCTTCAAGAGACCGCAGGCGGCAGATTTTTGCTGATGGAAAGCACTCCCATCTGGAAAGAAGCTGAAAGCGTTGTTGGAACGGGCAGAAATCCTGGTGAGAATACTTTAAAGAGGGAGCTATGGACAAAGTTTGAAGCAGCTTCTTTGAATGGGGTTCGATTTAACGACACTGTAACTCATAAGGGATTTCTTGACCGATTGGATGAGGTTGTCGATGGAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

483

Amino Acids

52.97

Weight (kDa)

5.97

Isoelectric Point (pI)

55.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 670
AccB1I GGYRCC 1 cut(s) 346
AccB7I CCANNNNNTGG 1 cut(s) 1136
AccBSI CCGCTC 1 cut(s) 81
AccII CGCG 4 cut(s) 206, 468, 470, 878
AccIII TCCGGA 1 cut(s) 970
AclWI GGATC 4 cut(s) 368, 768, 781, 960
AcsI RAATTY 2 cut(s) 48, 191
AcuI CTGAAG 1 cut(s) 729
AfaI GTAC 1 cut(s) 595
AfiI CCNNNNNNNGG 2 cut(s) 343, 1136
AhdI GACNNNNNGTC 2 cut(s) 551, 1221
AjnI CCWGG 3 cut(s) 461, 1099, 1315
AjuI GAANNNNNNNTTGG 4 cut(s) 673, 705, 1281, 1313
AluBI AGCT 6 cut(s) 508, 944, 976, 1286, 1342, 1364
AluI AGCT 6 cut(s) 508, 944, 976, 1286, 1342, 1364
Alw21I GWGCWC 1 cut(s) 479
Alw26I GTCTC 6 cut(s) 65, 487, 537, 819, 1101, 1226
Alw44I GTGCAC 1 cut(s) 475
AlwI GGATC 4 cut(s) 368, 768, 781, 960
Ama87I CYCGRG 1 cut(s) 350
Aor13HI TCCGGA 1 cut(s) 970
ApaLI GTGCAC 1 cut(s) 475
ApeKI GCWGC 3 cut(s) 389, 1109, 1361
ApoI RAATTY 2 cut(s) 48, 191
ArsI GACNNNNNNTTYG 2 cut(s) 521, 553
Asp700I GAANNNNTTC 1 cut(s) 586
AspLEI GCGC 3 cut(s) 468, 470, 985
AspS9I GGNCC 2 cut(s) 268, 553
AsuC2I CCSGG 3 cut(s) 351, 352, 551
AsuHPI GGTGA 4 cut(s) 326, 1026, 1196, 1331
AvaI CYCGRG 1 cut(s) 350
AvaII GGWCC 2 cut(s) 268, 553
BaeGI GKGCMC 3 cut(s) 231, 351, 479
BaeI ACNNNNGTAYC 2 cut(s) 599, 632
BamHI GGATCC 1 cut(s) 773
BanI GGYRCC 1 cut(s) 346
BauI CACGAG 1 cut(s) 659
BbsI GAAGAC 2 cut(s) 849, 1217
Bbv12I GWGCWC 1 cut(s) 479
BbvI GCAGC 3 cut(s) 376, 1096, 1373
BccI CCATC 3 cut(s) 1252, 1280, 1433
BceAI ACGGC 2 cut(s) 144, 979
BcgI CGANNNNNNTGC 2 cut(s) 305, 339
BciT130I CCWGG 3 cut(s) 463, 1101, 1317
BciVI GTATCC 2 cut(s) 600, 978
BcnI CCSGG 3 cut(s) 351, 352, 551
BcoDI GTCTC 6 cut(s) 65, 487, 537, 819, 1101, 1226
BfaI CTAG 3 cut(s) 305, 561, 1148
BfmI CTRYAG 1 cut(s) 390
BfoI RGCGCY 1 cut(s) 986
BfuI GTATCC 2 cut(s) 600, 978
BisI GCNGC 7 cut(s) 160, 169, 172, 390, 1110, 1243, 1362
BlsI GCNGC 7 cut(s) 161, 170, 173, 391, 1111, 1244, 1363
Bme1390I CCNGG 6 cut(s) 351, 352, 463, 551, 1101, 1317
Bme18I GGWCC 2 cut(s) 268, 553
BmeRI GACNNNNNGTC 2 cut(s) 551, 1221
BmeT110I CYCGRG 1 cut(s) 350
BmgT120I GGNCC 2 cut(s) 268, 553
BmiI GGNNCC 4 cut(s) 299, 348, 555, 775
BmrFI CCNGG 6 cut(s) 351, 352, 463, 551, 1101, 1317
BmrI ACTGGG 1 cut(s) 1146
BmsI GCATC 4 cut(s) 81, 155, 625, 1150
BmuI ACTGGG 1 cut(s) 1146
BpiI GAAGAC 2 cut(s) 849, 1217
BpmI CTGGAG 1 cut(s) 1083
BpuEI CTTGAG 1 cut(s) 746
BpuMI CCSGG 3 cut(s) 351, 352, 551
BsaI GGTCTC 1 cut(s) 1226
BsaJI CCNNGG 5 cut(s) 95, 341, 350, 777, 864
BsaWI WCCGGW 1 cut(s) 970
Bsc4I CCNNNNNNNGG 2 cut(s) 343, 1136
Bse1I ACTGG 2 cut(s) 921, 1141
Bse3DI GCAATG 1 cut(s) 1111
BseAI TCCGGA 1 cut(s) 970
BseBI CCWGG 3 cut(s) 463, 1101, 1317
BseDI CCNNGG 5 cut(s) 95, 341, 350, 777, 864
BseGI GGATG 2 cut(s) 539, 1432
BseLI CCNNNNNNNGG 2 cut(s) 343, 1136
BseMI GCAATG 1 cut(s) 1111
BseMII CTCAG 1 cut(s) 723
BseNI ACTGG 2 cut(s) 921, 1141
BsePI GCGCGC 1 cut(s) 466
BseRI GAGGAG 1 cut(s) 807
BseSI GKGCMC 3 cut(s) 231, 351, 479
BseXI GCAGC 3 cut(s) 376, 1096, 1373
Bsh1236I CGCG 4 cut(s) 206, 468, 470, 878
Bsh1285I CGRYCG 1 cut(s) 295
BshNI GGYRCC 1 cut(s) 346
BsiEI CGRYCG 1 cut(s) 295
BsiHKAI GWGCWC 1 cut(s) 479
BsiHKCI CYCGRG 1 cut(s) 350
BsiSI CCGG 3 cut(s) 351, 551, 971
BslFI GGGAC 1 cut(s) 539
BslI CCNNNNNNNGG 2 cut(s) 343, 1136
BsmAI GTCTC 6 cut(s) 65, 487, 537, 819, 1101, 1226
BsmFI GGGAC 1 cut(s) 539
Bso31I GGTCTC 1 cut(s) 1226
BsoBI CYCGRG 1 cut(s) 350
Bsp1286I GDGCHC 3 cut(s) 231, 351, 479
Bsp13I TCCGGA 1 cut(s) 970
Bsp143I GATC 5 cut(s) 292, 316, 373, 773, 952
Bsp19I CCATGG 2 cut(s) 341, 777
BspCNI CTCAG 1 cut(s) 724
BspEI TCCGGA 1 cut(s) 970
BspFNI CGCG 4 cut(s) 206, 468, 470, 878
BspLI GGNNCC 4 cut(s) 299, 348, 555, 775
BspMAI CTGCAG 1 cut(s) 394
BspPI GGATC 4 cut(s) 368, 768, 781, 960
BspT107I GGYRCC 1 cut(s) 346
BspTNI GGTCTC 1 cut(s) 1226
BsrBI CCGCTC 1 cut(s) 81
BsrDI GCAATG 1 cut(s) 1111
BsrI ACTGG 2 cut(s) 921, 1141
BssECI CCNNGG 5 cut(s) 95, 341, 350, 777, 864
BssHII GCGCGC 1 cut(s) 466
BssMI GATC 5 cut(s) 292, 316, 373, 773, 952
BssSI CACGAG 1 cut(s) 659
BssT1I CCWWGG 3 cut(s) 341, 777, 864
Bst2BI CACGAG 1 cut(s) 659
Bst2UI CCWGG 3 cut(s) 463, 1101, 1317
Bst4CI ACNGT 2 cut(s) 598, 1396
Bst6I CTCTTC 3 cut(s) 79, 99, 522
BstC8I GCNNGC 2 cut(s) 468, 1240
BstDEI CTNAG 2 cut(s) 31, 732
BstDSI CCRYGG 2 cut(s) 341, 777
BstF5I GGATG 2 cut(s) 539, 1432
BstFNI CGCG 4 cut(s) 206, 468, 470, 878
BstH2I RGCGCY 1 cut(s) 986
BstHHI GCGC 3 cut(s) 468, 470, 985
BstKTI GATC 5 cut(s) 295, 319, 376, 776, 955
BstMAI GTCTC 6 cut(s) 65, 487, 537, 819, 1101, 1226
BstMBI GATC 5 cut(s) 292, 316, 373, 773, 952
BstMCI CGRYCG 1 cut(s) 295
BstMWI GCNNNNNNNGC 6 cut(s) 165, 168, 346, 474, 982, 991
BstNI CCWGG 3 cut(s) 463, 1101, 1317
BstSCI CCNGG 6 cut(s) 349, 350, 461, 549, 1099, 1315
BstSFI CTRYAG 1 cut(s) 390
BstSLI GKGCMC 3 cut(s) 231, 351, 479
BstUI CGCG 4 cut(s) 206, 468, 470, 878
BstV1I GCAGC 3 cut(s) 376, 1096, 1373
BstV2I GAAGAC 2 cut(s) 849, 1217
BstX2I RGATCY 2 cut(s) 773, 952
BstYI RGATCY 2 cut(s) 773, 952
BsuI GTATCC 2 cut(s) 600, 978
BtgI CCRYGG 2 cut(s) 341, 777
BtsCI GGATG 2 cut(s) 539, 1432
BtsIMutI CAGTG 3 cut(s) 39, 928, 1392
Cac8I GCNNGC 2 cut(s) 468, 1240
CfoI GCGC 3 cut(s) 468, 470, 985
Cfr13I GGNCC 2 cut(s) 268, 553
Cfr9I CCCGGG 1 cut(s) 350
CseI GACGC 1 cut(s) 293
Csp6I GTAC 1 cut(s) 594
CviAII CATG 6 cut(s) 251, 342, 778, 801, 828, 1085
CviQI GTAC 1 cut(s) 594
DdeI CTNAG 2 cut(s) 31, 732
DpnI GATC 5 cut(s) 294, 318, 375, 775, 954
DpnII GATC 5 cut(s) 292, 316, 373, 773, 952
DraI TTTAAA 1 cut(s) 1332
DrdI GACNNNNNNGTC 1 cut(s) 670
DriI GACNNNNNGTC 2 cut(s) 551, 1221
DseDI GACNNNNNNGTC 1 cut(s) 670
Eam1104I CTCTTC 3 cut(s) 79, 99, 522
Eam1105I GACNNNNNGTC 2 cut(s) 551, 1221
EarI CTCTTC 3 cut(s) 79, 99, 522
EciI GGCGGA 2 cut(s) 187, 189
Eco130I CCWWGG 3 cut(s) 341, 777, 864
Eco31I GGTCTC 1 cut(s) 1226
Eco32I GATATC 1 cut(s) 144
Eco47I GGWCC 2 cut(s) 268, 553
Eco57I CTGAAG 1 cut(s) 729
Eco88I CYCGRG 1 cut(s) 350
EcoRII CCWGG 3 cut(s) 461, 1099, 1315
EcoRV GATATC 1 cut(s) 144
EcoT14I CCWWGG 3 cut(s) 341, 777, 864
ErhI CCWWGG 3 cut(s) 341, 777, 864
FaeI CATG 6 cut(s) 254, 345, 781, 804, 831, 1088
FalI AAGNNNNNCTT 2 cut(s) 673, 705
FaqI GGGAC 1 cut(s) 539
FatI CATG 6 cut(s) 250, 341, 777, 800, 827, 1084
Fnu4HI GCNGC 7 cut(s) 160, 169, 172, 390, 1110, 1243, 1362
FokI GGATG 2 cut(s) 526, 1439
Fsp4HI GCNGC 7 cut(s) 160, 169, 172, 390, 1110, 1243, 1362
FspBI CTAG 3 cut(s) 305, 561, 1148
GlaI GCGC 3 cut(s) 467, 469, 984
GluI GCNGC 7 cut(s) 160, 169, 172, 390, 1110, 1243, 1362
GsuI CTGGAG 1 cut(s) 1083
HaeII RGCGCY 1 cut(s) 986
HapII CCGG 3 cut(s) 351, 551, 971
HgaI GACGC 1 cut(s) 293
HhaI GCGC 3 cut(s) 468, 470, 985
Hin1II CATG 6 cut(s) 254, 345, 781, 804, 831, 1088
Hin6I GCGC 3 cut(s) 466, 468, 983
HinP1I GCGC 3 cut(s) 466, 468, 983
HincII GTYRAC 1 cut(s) 675
HindII GTYRAC 1 cut(s) 675
HindIII AAGCTT 1 cut(s) 942
HinfI GANTC 9 cut(s) 421, 431, 546, 695, 796, 854, 909, 926, 1028
HpaII CCGG 3 cut(s) 351, 551, 971
HphI GGTGA 4 cut(s) 326, 1026, 1196, 1331
Hpy166II GTNNAC 4 cut(s) 425, 477, 594, 675
Hpy188I TCNGA 7 cut(s) 316, 360, 373, 632, 694, 762, 853
Hpy8I GTNNAC 4 cut(s) 425, 477, 594, 675
Hpy99I CGWCG 2 cut(s) 284, 287
HpyAV CCTTC 6 cut(s) 218, 355, 456, 567, 699, 707
HpyCH4III ACNGT 2 cut(s) 598, 1396
HpyCH4V TGCA 4 cut(s) 392, 477, 638, 1047
HpyF10VI GCNNNNNNNGC 6 cut(s) 165, 168, 346, 474, 982, 991
HpyF3I CTNAG 2 cut(s) 31, 732
Hsp92II CATG 6 cut(s) 254, 345, 781, 804, 831, 1088
HspAI GCGC 3 cut(s) 466, 468, 983
Kpn2I TCCGGA 1 cut(s) 970
Kzo9I GATC 5 cut(s) 292, 316, 373, 773, 952
LmnI GCTCC 3 cut(s) 303, 973, 1339
Lsp1109I GCAGC 3 cut(s) 376, 1096, 1373
LweI GCATC 4 cut(s) 81, 155, 625, 1150
MaeI CTAG 3 cut(s) 305, 561, 1148
MaeIII GTNAC 4 cut(s) 64, 661, 872, 1396
MalI GATC 5 cut(s) 294, 318, 375, 775, 954
MbiI CCGCTC 1 cut(s) 81
MboI GATC 5 cut(s) 292, 316, 373, 773, 952
MfeI CAATTG 1 cut(s) 1124
MflI RGATCY 2 cut(s) 773, 952
MhlI GDGCHC 3 cut(s) 231, 351, 479
MluCI AATT 8 cut(s) 48, 191, 582, 646, 1008, 1124, 1131, 1158
MlyI GAGTC 5 cut(s) 425, 430, 540, 790, 863
MmeI TCCRAC 2 cut(s) 886, 1279
MroI TCCGGA 1 cut(s) 970
MroXI GAANNNNTTC 1 cut(s) 586
MseI TTAA 5 cut(s) 437, 504, 1077, 1331, 1386
MslI CAYNNNNRTG 2 cut(s) 782, 1039
MspI CCGG 3 cut(s) 351, 551, 971
MspR9I CCNGG 6 cut(s) 351, 352, 463, 551, 1101, 1317
MunI CAATTG 1 cut(s) 1124
MvaI CCWGG 3 cut(s) 463, 1101, 1317
MvnI CGCG 4 cut(s) 206, 468, 470, 878
MwoI GCNNNNNNNGC 6 cut(s) 165, 168, 346, 474, 982, 991
NciI CCSGG 3 cut(s) 351, 352, 551
NcoI CCATGG 2 cut(s) 341, 777
NdeII GATC 5 cut(s) 292, 316, 373, 773, 952
NlaIII CATG 6 cut(s) 254, 345, 781, 804, 831, 1088
NlaIV GGNNCC 4 cut(s) 299, 348, 555, 775
NmeAIII GCCGAG 1 cut(s) 120
NmuCI GTSAC 3 cut(s) 64, 661, 872
PauI GCGCGC 1 cut(s) 466
PcsI WCGNNNNNNNCGW 1 cut(s) 288
PdmI GAANNNNTTC 1 cut(s) 586
PfeI GAWTC 4 cut(s) 695, 909, 926, 1028
PflMI CCANNNNNTGG 1 cut(s) 1136
PkrI GCNGC 7 cut(s) 161, 170, 173, 391, 1111, 1244, 1363
Ple19I CGATCG 1 cut(s) 295
PleI GAGTC 5 cut(s) 425, 429, 540, 790, 862
PpsI GAGTC 5 cut(s) 425, 429, 540, 790, 862
Psp6I CCWGG 3 cut(s) 461, 1099, 1315
PspGI CCWGG 3 cut(s) 461, 1099, 1315
PspN4I GGNNCC 4 cut(s) 299, 348, 555, 775
PspPI GGNCC 2 cut(s) 268, 553
PstI CTGCAG 1 cut(s) 394
PsuI RGATCY 2 cut(s) 773, 952
PteI GCGCGC 1 cut(s) 466
PvuI CGATCG 1 cut(s) 295
RsaI GTAC 1 cut(s) 595
RsaNI GTAC 1 cut(s) 594
RseI CAYNNNNRTG 2 cut(s) 782, 1039
SaqAI TTAA 5 cut(s) 437, 504, 1077, 1331, 1386
SatI GCNGC 7 cut(s) 160, 169, 172, 390, 1110, 1243, 1362
Sau3AI GATC 5 cut(s) 292, 316, 373, 773, 952
Sau96I GGNCC 2 cut(s) 268, 553
SchI GAGTC 5 cut(s) 425, 430, 540, 790, 863
ScrFI CCNGG 6 cut(s) 351, 352, 463, 551, 1101, 1317
SduI GDGCHC 3 cut(s) 231, 351, 479
SfaNI GCATC 4 cut(s) 81, 155, 625, 1150
SfcI CTRYAG 1 cut(s) 390
SinI GGWCC 2 cut(s) 268, 553
SmaI CCCGGG 1 cut(s) 352
SmiMI CAYNNNNRTG 2 cut(s) 782, 1039
SmlI CTYRAG 1 cut(s) 725
SmoI CTYRAG 1 cut(s) 725
Sse9I AATT 8 cut(s) 48, 191, 582, 646, 1008, 1124, 1131, 1158
SspMI CTAG 3 cut(s) 305, 561, 1148
StyD4I CCNGG 6 cut(s) 349, 350, 461, 549, 1099, 1315
StyI CCWWGG 3 cut(s) 341, 777, 864
TaaI ACNGT 2 cut(s) 598, 1396
TaqI TCGA 8 cut(s) 146, 243, 291, 402, 600, 840, 1381, 1437
TaqII GACCGA 1 cut(s) 1434
TasI AATT 8 cut(s) 48, 191, 582, 646, 1008, 1124, 1131, 1158
TatI WGTACW 1 cut(s) 593
TauI GCSGC 4 cut(s) 162, 171, 174, 1245
TfiI GAWTC 4 cut(s) 695, 909, 926, 1028
Tru1I TTAA 5 cut(s) 437, 504, 1077, 1331, 1386
Tru9I TTAA 5 cut(s) 437, 504, 1077, 1331, 1386
TscAI CASTG 3 cut(s) 46, 928, 1399
TseFI GTSAC 3 cut(s) 64, 661, 872
TseI GCWGC 3 cut(s) 389, 1109, 1361
Tsp45I GTSAC 3 cut(s) 64, 661, 872
TspDTI ATGAA 5 cut(s) 60, 411, 800, 872, 1104
TspGWI ACGGA 2 cut(s) 83, 885
TspMI CCCGGG 1 cut(s) 350
TspRI CASTG 3 cut(s) 46, 928, 1399
Van91I CCANNNNNTGG 1 cut(s) 1136
VneI GTGCAC 1 cut(s) 475
VpaK11BI GGWCC 2 cut(s) 268, 553
XapI RAATTY 2 cut(s) 48, 191
XbaI TCTAGA 1 cut(s) 1147
XmaI CCCGGG 1 cut(s) 350
XmnI GAANNNNTTC 1 cut(s) 586
XspI CTAG 3 cut(s) 305, 561, 1148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.