psbQ-like protein 3
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G01918 |
| fragaria_vesca | FvH4_1g27614 |
| malus_domestica | MD09G1282000.v1.1 MD09G1282100.v1.1 |
| prunus_persica | Prupe.3G011900_v2.0.a1 |
| pyrus_communis | pycom09g19000 pycom17g27090 |
| rosa_chinensis | RchiOBHm_Chr3g0487781 |
| rosa_laevigata | RLG00000022972 |
| rosa_multiflora | Rmu_sc0005611.1_g000005 |
| rosa_roxburghii | Rroxscaffold_6G00394480 |
| rosa_rugosa | Rorug03G0236500 Rorug03G0236600 Rorug03G0236700 Rorug03G0236800 |
| rosa_samantha | Rh3AG284600 Rh3BG321400 Rh3CG319800 Rh3DG318400 |
| rosa_wichuraiana | Rw3G025240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 5, 116 |
| AclWI | GGATC | 2 cut(s) | 171, 326 |
| AcsI | RAATTY | 3 cut(s) | 35, 388, 404 |
| AfaI | GTAC | 1 cut(s) | 441 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 26, 289 |
| AgsI | TTSAA | 3 cut(s) | 35, 229, 404 |
| AluBI | AGCT | 5 cut(s) | 146, 203, 274, 333, 350 |
| AluI | AGCT | 5 cut(s) | 146, 203, 274, 333, 350 |
| Alw26I | GTCTC | 2 cut(s) | 252, 257 |
| AlwI | GGATC | 2 cut(s) | 171, 326 |
| ApoI | RAATTY | 3 cut(s) | 35, 388, 404 |
| AspLEI | GCGC | 2 cut(s) | 94, 140 |
| AsuHPI | GGTGA | 1 cut(s) | 335 |
| BanII | GRGCYC | 1 cut(s) | 218 |
| BccI | CCATC | 1 cut(s) | 163 |
| BciVI | GTATCC | 1 cut(s) | 482 |
| BclI | TGATCA | 1 cut(s) | 97 |
| BcoDI | GTCTC | 2 cut(s) | 252, 257 |
| BfoI | RGCGCY | 1 cut(s) | 95 |
| BfuI | GTATCC | 1 cut(s) | 482 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 317, 349 |
| Bsa29I | ATCGAT | 1 cut(s) | 396 |
| BsaI | GGTCTC | 1 cut(s) | 257 |
| BsaJI | CCNNGG | 2 cut(s) | 288, 313 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 164, 194 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 26, 289 |
| Bse1I | ACTGG | 1 cut(s) | 20 |
| BseCI | ATCGAT | 1 cut(s) | 396 |
| BseDI | CCNNGG | 2 cut(s) | 288, 313 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 26, 289 |
| BseNI | ACTGG | 1 cut(s) | 20 |
| BshVI | ATCGAT | 1 cut(s) | 396 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 26, 289 |
| BsmAI | GTCTC | 2 cut(s) | 252, 257 |
| BsmBI | CGTCTC | 1 cut(s) | 252 |
| Bso31I | GGTCTC | 1 cut(s) | 257 |
| Bsp1286I | GDGCHC | 1 cut(s) | 218 |
| Bsp143I | GATC | 5 cut(s) | 97, 163, 318, 393, 397 |
| Bsp19I | CCATGG | 1 cut(s) | 313 |
| BspACI | CCGC | 2 cut(s) | 5, 116 |
| BspDI | ATCGAT | 1 cut(s) | 396 |
| BspHI | TCATGA | 1 cut(s) | 540 |
| BspPI | GGATC | 2 cut(s) | 171, 326 |
| BspTNI | GGTCTC | 1 cut(s) | 257 |
| BsrI | ACTGG | 1 cut(s) | 20 |
| BssECI | CCNNGG | 2 cut(s) | 288, 313 |
| BssMI | GATC | 5 cut(s) | 97, 163, 318, 393, 397 |
| BssT1I | CCWWGG | 2 cut(s) | 288, 313 |
| Bst4CI | ACNGT | 1 cut(s) | 106 |
| Bst6I | CTCTTC | 1 cut(s) | 224 |
| BstDEI | CTNAG | 2 cut(s) | 206, 351 |
| BstDSI | CCRYGG | 1 cut(s) | 313 |
| BstH2I | RGCGCY | 1 cut(s) | 95 |
| BstHHI | GCGC | 2 cut(s) | 94, 140 |
| BstKTI | GATC | 5 cut(s) | 100, 166, 321, 396, 400 |
| BstMAI | GTCTC | 2 cut(s) | 252, 257 |
| BstMBI | GATC | 5 cut(s) | 97, 163, 318, 393, 397 |
| BstX2I | RGATCY | 1 cut(s) | 163 |
| BstYI | RGATCY | 1 cut(s) | 163 |
| Bsu15I | ATCGAT | 1 cut(s) | 396 |
| BsuI | GTATCC | 1 cut(s) | 482 |
| BsuTUI | ATCGAT | 1 cut(s) | 396 |
| BtgI | CCRYGG | 1 cut(s) | 313 |
| BtsIMutI | CAGTG | 1 cut(s) | 27 |
| CciI | TCATGA | 1 cut(s) | 540 |
| CfoI | GCGC | 2 cut(s) | 94, 140 |
| ClaI | ATCGAT | 1 cut(s) | 396 |
| Csp6I | GTAC | 1 cut(s) | 440 |
| CviAII | CATG | 5 cut(s) | 183, 314, 385, 493, 541 |
| CviQI | GTAC | 1 cut(s) | 440 |
| DdeI | CTNAG | 2 cut(s) | 206, 351 |
| DpnI | GATC | 5 cut(s) | 99, 165, 320, 395, 399 |
| DpnII | GATC | 5 cut(s) | 97, 163, 318, 393, 397 |
| Eam1104I | CTCTTC | 1 cut(s) | 224 |
| EarI | CTCTTC | 1 cut(s) | 224 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Eco130I | CCWWGG | 2 cut(s) | 288, 313 |
| Eco24I | GRGCYC | 1 cut(s) | 218 |
| Eco31I | GGTCTC | 1 cut(s) | 257 |
| EcoRI | GAATTC | 1 cut(s) | 35 |
| EcoT14I | CCWWGG | 2 cut(s) | 288, 313 |
| EcoT38I | GRGCYC | 1 cut(s) | 218 |
| ErhI | CCWWGG | 2 cut(s) | 288, 313 |
| Esp3I | CGTCTC | 1 cut(s) | 252 |
| FaeI | CATG | 5 cut(s) | 186, 317, 388, 496, 544 |
| FatI | CATG | 5 cut(s) | 182, 313, 384, 492, 540 |
| FbaI | TGATCA | 1 cut(s) | 97 |
| FriOI | GRGCYC | 1 cut(s) | 218 |
| GlaI | GCGC | 2 cut(s) | 93, 139 |
| HaeII | RGCGCY | 1 cut(s) | 95 |
| HhaI | GCGC | 2 cut(s) | 94, 140 |
| Hin1II | CATG | 5 cut(s) | 186, 317, 388, 496, 544 |
| Hin6I | GCGC | 2 cut(s) | 92, 138 |
| HinP1I | GCGC | 2 cut(s) | 92, 138 |
| HincII | GTYRAC | 1 cut(s) | 436 |
| HindII | GTYRAC | 1 cut(s) | 436 |
| HindIII | AAGCTT | 1 cut(s) | 144 |
| HinfI | GANTC | 1 cut(s) | 179 |
| HphI | GGTGA | 1 cut(s) | 335 |
| Hpy166II | GTNNAC | 2 cut(s) | 343, 436 |
| Hpy188I | TCNGA | 3 cut(s) | 102, 131, 168 |
| Hpy188III | TCNNGA | 2 cut(s) | 401, 541 |
| Hpy8I | GTNNAC | 2 cut(s) | 343, 436 |
| Hpy99I | CGWCG | 1 cut(s) | 223 |
| HpyAV | CCTTC | 3 cut(s) | 19, 154, 205 |
| HpyCH4III | ACNGT | 1 cut(s) | 106 |
| HpyCH4IV | ACGT | 1 cut(s) | 438 |
| HpyCH4V | TGCA | 4 cut(s) | 82, 110, 413, 446 |
| HpyF3I | CTNAG | 2 cut(s) | 206, 351 |
| HpySE526I | ACGT | 1 cut(s) | 438 |
| Hsp92II | CATG | 5 cut(s) | 186, 317, 388, 496, 544 |
| HspAI | GCGC | 2 cut(s) | 92, 138 |
| Ksp22I | TGATCA | 1 cut(s) | 97 |
| Kzo9I | GATC | 5 cut(s) | 97, 163, 318, 393, 397 |
| LmnI | GCTCC | 3 cut(s) | 62, 135, 279 |
| LpnPI | CCDG | 6 cut(s) | 33, 108, 423, 551, 561, 605 |
| MaeII | ACGT | 1 cut(s) | 438 |
| MalI | GATC | 5 cut(s) | 99, 165, 320, 395, 399 |
| MboI | GATC | 5 cut(s) | 97, 163, 318, 393, 397 |
| MboII | GAAGA | 4 cut(s) | 66, 134, 241, 353 |
| MfeI | CAATTG | 1 cut(s) | 580 |
| MflI | RGATCY | 1 cut(s) | 163 |
| MhlI | GDGCHC | 1 cut(s) | 218 |
| MluCI | AATT | 8 cut(s) | 35, 191, 388, 404, 525, 571, 580, 586 |
| MlyI | GAGTC | 1 cut(s) | 188 |
| MmeI | TCCRAC | 3 cut(s) | 132, 156, 466 |
| MnlI | CCTC | 4 cut(s) | 112, 125, 319, 447 |
| MseI | TTAA | 5 cut(s) | 269, 420, 498, 570, 607 |
| MunI | CAATTG | 1 cut(s) | 580 |
| NcoI | CCATGG | 1 cut(s) | 313 |
| NdeII | GATC | 5 cut(s) | 97, 163, 318, 393, 397 |
| NlaIII | CATG | 5 cut(s) | 186, 317, 388, 496, 544 |
| PagI | TCATGA | 1 cut(s) | 540 |
| PleI | GAGTC | 1 cut(s) | 187 |
| PpsI | GAGTC | 1 cut(s) | 187 |
| PsuI | RGATCY | 1 cut(s) | 163 |
| RsaI | GTAC | 1 cut(s) | 441 |
| RsaNI | GTAC | 1 cut(s) | 440 |
| SaqAI | TTAA | 5 cut(s) | 269, 420, 498, 570, 607 |
| Sau3AI | GATC | 5 cut(s) | 97, 163, 318, 393, 397 |
| SchI | GAGTC | 1 cut(s) | 188 |
| SduI | GDGCHC | 1 cut(s) | 218 |
| SetI | ASST | 9 cut(s) | 148, 205, 269, 276, 294, 335, 352, 441, 458 |
| Sse9I | AATT | 8 cut(s) | 35, 191, 388, 404, 525, 571, 580, 586 |
| SsiI | CCGC | 2 cut(s) | 5, 116 |
| StyI | CCWWGG | 2 cut(s) | 288, 313 |
| TaaI | ACNGT | 1 cut(s) | 106 |
| TaiI | ACGT | 1 cut(s) | 441 |
| TaqI | TCGA | 1 cut(s) | 396 |
| TasI | AATT | 8 cut(s) | 35, 191, 388, 404, 525, 571, 580, 586 |
| Tru1I | TTAA | 5 cut(s) | 269, 420, 498, 570, 607 |
| Tru9I | TTAA | 5 cut(s) | 269, 420, 498, 570, 607 |
| TscAI | CASTG | 1 cut(s) | 27 |
| TspDTI | ATGAA | 4 cut(s) | 401, 524, 529, 557 |
| TspRI | CASTG | 1 cut(s) | 27 |
| XapI | RAATTY | 3 cut(s) | 35, 388, 404 |