Nucleolar pre-ribosomal-associated protein 1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G72270 AT4G27010 AT4G27010 |
| fragaria_vesca | FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 FvH4_3g22520 |
| malus_domestica | MD03G1202300.v1.1 |
| prunus_persica | Prupe.4G211600_v2.0.a1 Prupe.4G211600_v2.0.a1 Prupe.4G211600_v2.0.a1 |
| pyrus_communis | pycom03g15370 pycom03g15380 pycom03g15390 |
| rosa_chinensis | RchiOBHm_Chr5g0039261 |
| rosa_laevigata | RLG00000033900 RLG00000033902 |
| rosa_multiflora | Rmu_sc0000533.1_g000002 Rmu_sc0000533.1_g000003 Rmu_ssc0000410.1_g000046 |
| rosa_roxburghii | Rroxscaffold_1G00040450 Rroxscaffold_1G00041880 |
| rosa_rugosa | Rorug05G0177300 |
| rosa_samantha | Rh5AG264000 Rh5BG268900 Rh5CG301900 Rh5DG276600 |
| rosa_wichuraiana | Rw5G024750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 152 |
| AatII | GACGTC | 1 cut(s) | 2097 |
| Acc16I | TGCGCA | 1 cut(s) | 5525 |
| Acc36I | ACCTGC | 2 cut(s) | 3093, 7382 |
| AccB1I | GGYRCC | 2 cut(s) | 3007, 5240 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 923, 5761, 7531 |
| AccBSI | CCGCTC | 1 cut(s) | 1245 |
| AccI | GTMKAC | 6 cut(s) | 1447, 4014, 4184, 4228, 6103, 6867 |
| AccII | CGCG | 3 cut(s) | 376, 5149, 5729 |
| AcyI | GRCGYC | 2 cut(s) | 497, 2094 |
| AdeI | CACNNNGTG | 1 cut(s) | 1958 |
| AfeI | AGCGCT | 1 cut(s) | 2607 |
| AflII | CTTAAG | 2 cut(s) | 59, 995 |
| AflIII | ACRYGT | 4 cut(s) | 1369, 2358, 6041, 6355 |
| AjiI | CACGTC | 1 cut(s) | 7168 |
| AjnI | CCWGG | 4 cut(s) | 2097, 2845, 4959, 7466 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2660, 2692 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 7163, 7195 |
| Alw21I | GWGCWC | 4 cut(s) | 221, 1719, 1832, 4172 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 4610, 5807, 7016 |
| Ama87I | CYCGRG | 1 cut(s) | 646 |
| Aor51HI | AGCGCT | 1 cut(s) | 2607 |
| AoxI | GGCC | 8 cut(s) | 566, 925, 2259, 2495, 2828, 5252, 6904, 7252 |
| AseI | ATTAAT | 3 cut(s) | 3909, 4055, 4494 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 2083, 2177, 2180, 3587, 4479, 6127, 6438 |
| AspS9I | GGNCC | 4 cut(s) | 1592, 2260, 3050, 7252 |
| AsuC2I | CCSGG | 4 cut(s) | 261, 647, 648, 2064 |
| AsuII | TTCGAA | 1 cut(s) | 1411 |
| AvaI | CYCGRG | 1 cut(s) | 646 |
| AvaII | GGWCC | 2 cut(s) | 1592, 3050 |
| AxyI | CCTNAGG | 1 cut(s) | 2256 |
| BaeGI | GKGCMC | 1 cut(s) | 4197 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 3161, 3194, 4734, 4767, 6302, 6335 |
| BamHI | GGATCC | 3 cut(s) | 1173, 7171, 7498 |
| BanI | GGYRCC | 2 cut(s) | 3007, 5240 |
| BanII | GRGCYC | 4 cut(s) | 646, 1769, 3069, 4172 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 5442, 5474 |
| BauI | CACGAG | 1 cut(s) | 4425 |
| BbsI | GAAGAC | 9 cut(s) | 18, 2345, 2629, 2750, 3402, 4496, 5463, 6044, 7355 |
| Bbv12I | GWGCWC | 4 cut(s) | 221, 1719, 1832, 4172 |
| BceAI | ACGGC | 4 cut(s) | 2141, 2482, 4324, 4447 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 4507, 4541, 4692, 4726 |
| BciT130I | CCWGG | 4 cut(s) | 2099, 2847, 4961, 7468 |
| BciVI | GTATCC | 4 cut(s) | 756, 1236, 6303, 6796 |
| BclI | TGATCA | 3 cut(s) | 2914, 3637, 5812 |
| BcnI | CCSGG | 4 cut(s) | 261, 647, 648, 2064 |
| BfoI | RGCGCY | 4 cut(s) | 442, 455, 2609, 6930 |
| BfrI | CTTAAG | 2 cut(s) | 59, 995 |
| BfuAI | ACCTGC | 2 cut(s) | 3093, 7382 |
| BfuI | GTATCC | 4 cut(s) | 756, 1236, 6303, 6796 |
| BglII | AGATCT | 3 cut(s) | 1489, 1639, 7278 |
| BlpI | GCTNAGC | 2 cut(s) | 435, 2577 |
| BmcAI | AGTACT | 2 cut(s) | 2008, 3512 |
| Bme1390I | CCNGG | 8 cut(s) | 261, 647, 648, 2064, 2099, 2847, 4961, 7468 |
| Bme18I | GGWCC | 2 cut(s) | 1592, 3050 |
| BmeT110I | CYCGRG | 1 cut(s) | 646 |
| BmgBI | CACGTC | 1 cut(s) | 7168 |
| BmgT120I | GGNCC | 4 cut(s) | 1592, 2260, 3050, 7252 |
| BmrFI | CCNGG | 8 cut(s) | 261, 647, 648, 2064, 2099, 2847, 4961, 7468 |
| BmrI | ACTGGG | 1 cut(s) | 4645 |
| BmuI | ACTGGG | 1 cut(s) | 4645 |
| BpiI | GAAGAC | 9 cut(s) | 18, 2345, 2629, 2750, 3402, 4496, 5463, 6044, 7355 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1042, 1074, 3212, 3244, 6916, 6948 |
| BpmI | CTGGAG | 8 cut(s) | 195, 653, 1514, 3277, 5645, 6292, 6918, 7489 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1793 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 435, 2577 |
| Bpu14I | TTCGAA | 1 cut(s) | 1411 |
| BpuEI | CTTGAG | 7 cut(s) | 1307, 1370, 1456, 1667, 2630, 6401, 6683 |
| BpuMI | CCSGG | 4 cut(s) | 261, 647, 648, 2064 |
| BsaAI | YACGTR | 2 cut(s) | 2359, 5978 |
| BsaHI | GRCGYC | 2 cut(s) | 497, 2094 |
| BsaI | GGTCTC | 5 cut(s) | 1045, 1356, 1872, 4403, 4714 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2632, 2662 |
| Bse118I | RCCGGY | 1 cut(s) | 134 |
| Bse1I | ACTGG | 8 cut(s) | 1759, 2014, 2901, 3294, 4640, 4773, 6996, 7157 |
| Bse21I | CCTNAGG | 1 cut(s) | 2256 |
| Bse3DI | GCAATG | 9 cut(s) | 627, 749, 3535, 3985, 4108, 4246, 4874, 6020, 6654 |
| BseBI | CCWGG | 4 cut(s) | 2099, 2847, 4961, 7468 |
| BseMI | GCAATG | 9 cut(s) | 627, 749, 3535, 3985, 4108, 4246, 4874, 6020, 6654 |
| BseNI | ACTGG | 8 cut(s) | 1759, 2014, 2901, 3294, 4640, 4773, 6996, 7157 |
| BseRI | GAGGAG | 3 cut(s) | 737, 2671, 4816 |
| BseSI | GKGCMC | 1 cut(s) | 4197 |
| BseYI | CCCAGC | 3 cut(s) | 706, 1177, 4603 |
| BsgI | GTGCAG | 3 cut(s) | 1086, 1223, 1662 |
| Bsh1236I | CGCG | 3 cut(s) | 376, 5149, 5729 |
| Bsh1285I | CGRYCG | 2 cut(s) | 380, 1005 |
| BshFI | GGCC | 8 cut(s) | 568, 927, 2261, 2497, 2830, 5254, 6906, 7254 |
| BshNI | GGYRCC | 2 cut(s) | 3007, 5240 |
| BsiEI | CGRYCG | 2 cut(s) | 380, 1005 |
| BsiHKAI | GWGCWC | 4 cut(s) | 221, 1719, 1832, 4172 |
| BsiHKCI | CYCGRG | 1 cut(s) | 646 |
| BsiSI | CCGG | 6 cut(s) | 135, 247, 260, 647, 2063, 5568 |
| BslFI | GGGAC | 3 cut(s) | 2332, 4629, 4929 |
| BsmBI | CGTCTC | 2 cut(s) | 1062, 6560 |
| BsmFI | GGGAC | 3 cut(s) | 2332, 4629, 4929 |
| BsmI | GAATGC | 4 cut(s) | 3587, 4555, 5265, 5324 |
| BsnI | GGCC | 8 cut(s) | 568, 927, 2261, 2497, 2830, 5254, 6906, 7254 |
| Bso31I | GGTCTC | 5 cut(s) | 1045, 1356, 1872, 4403, 4714 |
| BsoBI | CYCGRG | 1 cut(s) | 646 |
| Bsp119I | TTCGAA | 1 cut(s) | 1411 |
| Bsp1286I | GDGCHC | 8 cut(s) | 221, 646, 1719, 1769, 1832, 3069, 4172, 4197 |
| Bsp1407I | TGTACA | 3 cut(s) | 1908, 2693, 3182 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 435, 2577 |
| Bsp19I | CCATGG | 2 cut(s) | 6515, 7490 |
| BspANI | GGCC | 8 cut(s) | 568, 927, 2261, 2497, 2830, 5254, 6906, 7254 |
| BspFNI | CGCG | 3 cut(s) | 376, 5149, 5729 |
| BspHI | TCATGA | 4 cut(s) | 70, 1212, 3313, 4438 |
| BspMAI | CTGCAG | 7 cut(s) | 534, 877, 1827, 2245, 2286, 5379, 6154 |
| BspMI | ACCTGC | 2 cut(s) | 3093, 7382 |
| BspQI | GCTCTTC | 1 cut(s) | 5073 |
| BspT104I | TTCGAA | 1 cut(s) | 1411 |
| BspT107I | GGYRCC | 2 cut(s) | 3007, 5240 |
| BspTI | CTTAAG | 2 cut(s) | 59, 995 |
| BspTNI | GGTCTC | 5 cut(s) | 1045, 1356, 1872, 4403, 4714 |
| BsrBI | CCGCTC | 1 cut(s) | 1245 |
| BsrDI | GCAATG | 9 cut(s) | 627, 749, 3535, 3985, 4108, 4246, 4874, 6020, 6654 |
| BsrFI | RCCGGY | 1 cut(s) | 134 |
| BsrGI | TGTACA | 3 cut(s) | 1908, 2693, 3182 |
| BsrI | ACTGG | 8 cut(s) | 1759, 2014, 2901, 3294, 4640, 4773, 6996, 7157 |
| BssAI | RCCGGY | 1 cut(s) | 134 |
| BssNAI | GTATAC | 2 cut(s) | 4015, 6104 |
| BssNI | GRCGYC | 2 cut(s) | 497, 2094 |
| BssSI | CACGAG | 1 cut(s) | 4425 |
| BssT1I | CCWWGG | 8 cut(s) | 1342, 1871, 2752, 3483, 5922, 6429, 6515, 7490 |
| Bst1107I | GTATAC | 2 cut(s) | 4015, 6104 |
| Bst2BI | CACGAG | 1 cut(s) | 4425 |
| Bst2UI | CCWGG | 4 cut(s) | 2099, 2847, 4961, 7468 |
| Bst6I | CTCTTC | 9 cut(s) | 416, 1074, 1459, 4158, 5073, 6133, 6212, 6534, 7269 |
| BstACI | GRCGYC | 2 cut(s) | 497, 2094 |
| BstAFI | CTTAAG | 2 cut(s) | 59, 995 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 5107, 7016 |
| BstAUI | TGTACA | 3 cut(s) | 1908, 2693, 3182 |
| BstBAI | YACGTR | 2 cut(s) | 2359, 5978 |
| BstBI | TTCGAA | 1 cut(s) | 1411 |
| BstC8I | GCNNGC | 6 cut(s) | 704, 1418, 3696, 3954, 3992, 7400 |
| BstDSI | CCRYGG | 2 cut(s) | 6515, 7490 |
| BstEII | GGTNACC | 1 cut(s) | 3410 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 5248 |
| BstFNI | CGCG | 3 cut(s) | 376, 5149, 5729 |
| BstH2I | RGCGCY | 4 cut(s) | 442, 455, 2609, 6930 |
| BstMCI | CGRYCG | 2 cut(s) | 380, 1005 |
| BstNI | CCWGG | 4 cut(s) | 2099, 2847, 4961, 7468 |
| BstNSI | RCATGY | 7 cut(s) | 1373, 3698, 5558, 5825, 6045, 6359, 7242 |
| BstPI | GGTNACC | 1 cut(s) | 3410 |
| BstSCI | CCNGG | 8 cut(s) | 259, 645, 646, 2062, 2097, 2845, 4959, 7466 |
| BstSLI | GKGCMC | 1 cut(s) | 4197 |
| BstUI | CGCG | 3 cut(s) | 376, 5149, 5729 |
| BstV2I | GAAGAC | 9 cut(s) | 18, 2345, 2629, 2750, 3402, 4496, 5463, 6044, 7355 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1759, 2957 |
| BstZ17I | GTATAC | 2 cut(s) | 4015, 6104 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2256 |
| BsuI | GTATCC | 4 cut(s) | 756, 1236, 6303, 6796 |
| BsuRI | GGCC | 8 cut(s) | 568, 927, 2261, 2497, 2830, 5254, 6906, 7254 |
| BtgI | CCRYGG | 2 cut(s) | 6515, 7490 |
| BtrI | CACGTC | 1 cut(s) | 7168 |
| BtsI | GCAGTG | 3 cut(s) | 1174, 1832, 5596 |
| BveI | ACCTGC | 2 cut(s) | 3093, 7382 |
| Cac8I | GCNNGC | 6 cut(s) | 704, 1418, 3696, 3954, 3992, 7400 |
| CaiI | CAGNNNCTG | 3 cut(s) | 4610, 5807, 7016 |
| CciI | TCATGA | 4 cut(s) | 70, 1212, 3313, 4438 |
| Cfr10I | RCCGGY | 1 cut(s) | 134 |
| Cfr13I | GGNCC | 4 cut(s) | 1592, 2260, 3050, 7252 |
| Cfr9I | CCCGGG | 1 cut(s) | 646 |
| CseI | GACGC | 4 cut(s) | 486, 959, 5718, 5855 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 7222, 7257 |
| DraI | TTTAAA | 3 cut(s) | 966, 1353, 7200 |
| DraIII | CACNNNGTG | 1 cut(s) | 1958 |
| Eam1104I | CTCTTC | 9 cut(s) | 416, 1074, 1459, 4158, 5073, 6133, 6212, 6534, 7269 |
| EarI | CTCTTC | 9 cut(s) | 416, 1074, 1459, 4158, 5073, 6133, 6212, 6534, 7269 |
| EciI | GGCGGA | 2 cut(s) | 1593, 7447 |
| Ecl136II | GAGCTC | 1 cut(s) | 4170 |
| Eco130I | CCWWGG | 8 cut(s) | 1342, 1871, 2752, 3483, 5922, 6429, 6515, 7490 |
| Eco147I | AGGCCT | 1 cut(s) | 5254 |
| Eco24I | GRGCYC | 4 cut(s) | 646, 1769, 3069, 4172 |
| Eco31I | GGTCTC | 5 cut(s) | 1045, 1356, 1872, 4403, 4714 |
| Eco32I | GATATC | 3 cut(s) | 2349, 3945, 6540 |
| Eco47I | GGWCC | 2 cut(s) | 1592, 3050 |
| Eco47III | AGCGCT | 1 cut(s) | 2607 |
| Eco53kI | GAGCTC | 1 cut(s) | 4170 |
| Eco81I | CCTNAGG | 1 cut(s) | 2256 |
| Eco88I | CYCGRG | 1 cut(s) | 646 |
| Eco91I | GGTNACC | 1 cut(s) | 3410 |
| EcoICRI | GAGCTC | 1 cut(s) | 4170 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 5248 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2260 |
| EcoO65I | GGTNACC | 1 cut(s) | 3410 |
| EcoRI | GAATTC | 3 cut(s) | 4312, 6370, 7090 |
| EcoRII | CCWGG | 4 cut(s) | 2097, 2845, 4959, 7466 |
| EcoRV | GATATC | 3 cut(s) | 2349, 3945, 6540 |
| EcoT14I | CCWWGG | 8 cut(s) | 1342, 1871, 2752, 3483, 5922, 6429, 6515, 7490 |
| EcoT22I | ATGCAT | 6 cut(s) | 1111, 4179, 4874, 5010, 5823, 5895 |
| EcoT38I | GRGCYC | 4 cut(s) | 646, 1769, 3069, 4172 |
| ErhI | CCWWGG | 8 cut(s) | 1342, 1871, 2752, 3483, 5922, 6429, 6515, 7490 |
| Esp3I | CGTCTC | 2 cut(s) | 1062, 6560 |
| FaqI | GGGAC | 3 cut(s) | 2332, 4629, 4929 |
| FauI | CCCGC | 1 cut(s) | 3361 |
| FauNDI | CATATG | 1 cut(s) | 5817 |
| FbaI | TGATCA | 3 cut(s) | 2914, 3637, 5812 |
| FblI | GTMKAC | 6 cut(s) | 1447, 4014, 4184, 4228, 6103, 6867 |
| FriOI | GRGCYC | 4 cut(s) | 646, 1769, 3069, 4172 |
| FspAI | RTGCGCAY | 1 cut(s) | 5525 |
| FspI | TGCGCA | 1 cut(s) | 5525 |
| GsaI | CCCAGC | 3 cut(s) | 710, 1181, 4607 |
| GsuI | CTGGAG | 8 cut(s) | 195, 653, 1514, 3277, 5645, 6292, 6918, 7489 |
| HaeII | RGCGCY | 4 cut(s) | 442, 455, 2609, 6930 |
| HaeIII | GGCC | 8 cut(s) | 568, 927, 2261, 2497, 2830, 5254, 6906, 7254 |
| HapII | CCGG | 6 cut(s) | 135, 247, 260, 647, 2063, 5568 |
| HgaI | GACGC | 4 cut(s) | 486, 959, 5718, 5855 |
| Hin1I | GRCGYC | 2 cut(s) | 497, 2094 |
| HincII | GTYRAC | 2 cut(s) | 2092, 5845 |
| HindII | GTYRAC | 2 cut(s) | 2092, 5845 |
| HindIII | AAGCTT | 6 cut(s) | 992, 1414, 2119, 3950, 6074, 7145 |
| HpaII | CCGG | 6 cut(s) | 135, 247, 260, 647, 2063, 5568 |
| Hpy99I | CGWCG | 1 cut(s) | 6836 |
| Hsp92I | GRCGYC | 2 cut(s) | 497, 2094 |
| Ksp22I | TGATCA | 3 cut(s) | 2914, 3637, 5812 |
| LguI | GCTCTTC | 1 cut(s) | 5073 |
| MbiI | CCGCTC | 1 cut(s) | 1245 |
| MfeI | CAATTG | 3 cut(s) | 3658, 4764, 5529 |
| MhlI | GDGCHC | 8 cut(s) | 221, 646, 1719, 1769, 1832, 3069, 4172, 4197 |
| MlyI | GAGTC | 7 cut(s) | 310, 1453, 1553, 1888, 6379, 6434, 7007 |
| MmeI | TCCRAC | 7 cut(s) | 342, 2599, 3232, 3725, 5114, 5337, 7488 |
| Mph1103I | ATGCAT | 6 cut(s) | 1111, 4179, 4874, 5010, 5823, 5895 |
| MroXI | GAANNNNTTC | 7 cut(s) | 2083, 2177, 2180, 3587, 4479, 6127, 6438 |
| MslI | CAYNNNNRTG | 9 cut(s) | 309, 1117, 4853, 5238, 5820, 6920, 7035, 7407, 7548 |
| MspA1I | CMGCKG | 1 cut(s) | 702 |
| MspCI | CTTAAG | 2 cut(s) | 59, 995 |
| MspI | CCGG | 6 cut(s) | 135, 247, 260, 647, 2063, 5568 |
| MspR9I | CCNGG | 8 cut(s) | 261, 647, 648, 2064, 2099, 2847, 4961, 7468 |
| MunI | CAATTG | 3 cut(s) | 3658, 4764, 5529 |
| Mva1269I | GAATGC | 4 cut(s) | 3587, 4555, 5265, 5324 |
| MvaI | CCWGG | 4 cut(s) | 2099, 2847, 4961, 7468 |
| MvnI | CGCG | 3 cut(s) | 376, 5149, 5729 |
| NciI | CCSGG | 4 cut(s) | 261, 647, 648, 2064 |
| NcoI | CCATGG | 2 cut(s) | 6515, 7490 |
| NdeI | CATATG | 1 cut(s) | 5817 |
| NmuCI | GTSAC | 8 cut(s) | 1958, 2250, 2450, 4243, 6061, 6715, 7163, 7513 |
| NsbI | TGCGCA | 1 cut(s) | 5525 |
| NsiI | ATGCAT | 6 cut(s) | 1111, 4179, 4874, 5010, 5823, 5895 |
| NspI | RCATGY | 7 cut(s) | 1373, 3698, 5558, 5825, 6045, 6359, 7242 |
| NspV | TTCGAA | 1 cut(s) | 1411 |
| PaeI | GCATGC | 1 cut(s) | 3698 |
| PagI | TCATGA | 4 cut(s) | 70, 1212, 3313, 4438 |
| PceI | AGGCCT | 1 cut(s) | 5254 |
| PciI | ACATGT | 3 cut(s) | 1369, 6041, 6355 |
| PciSI | GCTCTTC | 1 cut(s) | 5073 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 494 |
| PctI | GAATGC | 4 cut(s) | 3587, 4555, 5265, 5324 |
| PdmI | GAANNNNTTC | 7 cut(s) | 2083, 2177, 2180, 3587, 4479, 6127, 6438 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 923, 5761, 7531 |
| PleI | GAGTC | 7 cut(s) | 309, 1452, 1553, 1888, 6379, 6433, 7007 |
| PpsI | GAGTC | 7 cut(s) | 309, 1452, 1553, 1888, 6379, 6433, 7007 |
| Ppu21I | YACGTR | 2 cut(s) | 2359, 5978 |
| PscI | ACATGT | 3 cut(s) | 1369, 6041, 6355 |
| PshBI | ATTAAT | 3 cut(s) | 3909, 4055, 4494 |
| PsiI | TTATAA | 1 cut(s) | 152 |
| Psp124BI | GAGCTC | 1 cut(s) | 4172 |
| Psp6I | CCWGG | 4 cut(s) | 2097, 2845, 4959, 7466 |
| PspEI | GGTNACC | 1 cut(s) | 3410 |
| PspFI | CCCAGC | 3 cut(s) | 706, 1177, 4603 |
| PspGI | CCWGG | 4 cut(s) | 2097, 2845, 4959, 7466 |
| PspPI | GGNCC | 4 cut(s) | 1592, 2260, 3050, 7252 |
| PstI | CTGCAG | 7 cut(s) | 534, 877, 1827, 2245, 2286, 5379, 6154 |
| PstNI | CAGNNNCTG | 3 cut(s) | 4610, 5807, 7016 |
| RseI | CAYNNNNRTG | 9 cut(s) | 309, 1117, 4853, 5238, 5820, 6920, 7035, 7407, 7548 |
| SacI | GAGCTC | 1 cut(s) | 4172 |
| SapI | GCTCTTC | 1 cut(s) | 5073 |
| Sau96I | GGNCC | 4 cut(s) | 1592, 2260, 3050, 7252 |
| ScaI | AGTACT | 2 cut(s) | 2008, 3512 |
| SchI | GAGTC | 7 cut(s) | 310, 1453, 1553, 1888, 6379, 6434, 7007 |
| ScrFI | CCNGG | 8 cut(s) | 261, 647, 648, 2064, 2099, 2847, 4961, 7468 |
| SduI | GDGCHC | 8 cut(s) | 221, 646, 1719, 1769, 1832, 3069, 4172, 4197 |
| SfuI | TTCGAA | 1 cut(s) | 1411 |
| SinI | GGWCC | 2 cut(s) | 1592, 3050 |
| SmaI | CCCGGG | 1 cut(s) | 648 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 309, 1117, 4853, 5238, 5820, 6920, 7035, 7407, 7548 |
| SmlI | CTYRAG | 9 cut(s) | 59, 995, 1322, 1385, 1471, 1682, 2609, 6380, 6662 |
| SmoI | CTYRAG | 9 cut(s) | 59, 995, 1322, 1385, 1471, 1682, 2609, 6380, 6662 |
| SphI | GCATGC | 1 cut(s) | 3698 |
| SseBI | AGGCCT | 1 cut(s) | 5254 |
| SspI | AATATT | 4 cut(s) | 844, 2712, 3907, 4363 |
| SstI | GAGCTC | 1 cut(s) | 4172 |
| StuI | AGGCCT | 1 cut(s) | 5254 |
| StyD4I | CCNGG | 8 cut(s) | 259, 645, 646, 2062, 2097, 2845, 4959, 7466 |
| StyI | CCWWGG | 8 cut(s) | 1342, 1871, 2752, 3483, 5922, 6429, 6515, 7490 |
| TaqII | GACCGA | 2 cut(s) | 1019, 4590 |
| TatI | WGTACW | 6 cut(s) | 1908, 2006, 2693, 3182, 3510, 5026 |
| TauI | GCSGC | 2 cut(s) | 452, 7355 |
| TseFI | GTSAC | 8 cut(s) | 1958, 2250, 2450, 4243, 6061, 6715, 7163, 7513 |
| Tsp45I | GTSAC | 8 cut(s) | 1958, 2250, 2450, 4243, 6061, 6715, 7163, 7513 |
| TspGWI | ACGGA | 1 cut(s) | 5632 |
| TspMI | CCCGGG | 1 cut(s) | 646 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 923, 5761, 7531 |
| Vha464I | CTTAAG | 2 cut(s) | 59, 995 |
| VpaK11BI | GGWCC | 2 cut(s) | 1592, 3050 |
| VspI | ATTAAT | 3 cut(s) | 3909, 4055, 4494 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 5248 |
| XbaI | TCTAGA | 3 cut(s) | 4213, 4997, 5326 |
| XceI | RCATGY | 7 cut(s) | 1373, 3698, 5558, 5825, 6045, 6359, 7242 |
| XmaI | CCCGGG | 1 cut(s) | 646 |
| XmiI | GTMKAC | 6 cut(s) | 1447, 4014, 4184, 4228, 6103, 6867 |
| XmnI | GAANNNNTTC | 7 cut(s) | 2083, 2177, 2180, 3587, 4479, 6127, 6438 |
| ZraI | GACGTC | 1 cut(s) | 2095 |
| ZrmI | AGTACT | 2 cut(s) | 2008, 3512 |
| Zsp2I | ATGCAT | 6 cut(s) | 1111, 4179, 4874, 5010, 5823, 5895 |