RchiOBHm_Chr5g0046041

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0006395
Physical Location & Seq
Forward (+)
42101234 .. 42102813
1580 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1395 bp
ATGAAACAAAGCATAGTGTTATATCCAGCATCACCTGGATCGCACTACTTGGGTTCCACAGTCGAACTAGGAAAGATCATCTCCCAACGCCACCCCAACTTCTCCATCACAGTCTTGGTCGACACATCTTCCCCTCGAGCTCTAGCCAATTCCTCATACATCAACCATCTTCTCTCTTCTGATCAAACCTCCATCTCCTTCTTCACTCTCCCCTCCCTCAATCTCCCCCACCCCGACGCCCAACCCAAACTCGAATACTTCTTAACTGTCCCCAATGTCGTCCAAGCCCTCAAGACAATCTCTCTCACTTCCAAAGTCCTCGCCTTCATCACGTCAGCAGTGCAACAGTACCCTAACGACCCGGAAATCCCAACTTACTATTACTTCCCCTCTTGCGCCTCTGTTCTTGCTCTGTGTCTGTACCTCCCCACTTTCCATGATCAAACGCCGGAGAGCTTCAAGGACCTAAACGACGACGTTGTGGAGTTTCCGGGATTGCCAGCGCTCCGAGGCTCGCAAATGCCGGATCCTATTCTCGACCGCAACGAGGCTGGATATGATCACTATCTCCATATGGCTTCCTGTCTTCCAAAAGCAAAGGGAATTATAATAAACACCATCCAAGAACTTGAGCCTCGAGCAATCAAGGCCATAAAGGAAGGTATTTGTGTTCCTAATCATCGAACTCCGCCGTTATATCACATCGGACCGTTCATTTCCGATCGCGACTCTGAAAATAGGTCGATCCAAGGCGGTTCGCCTATGCCAACTAACTGTTCCACGTTGTTATGGCTGGATGAGCAGCCGAGCCGGAGTGTGGTGTACCTGTGCTTTGGAAGCAGAGGTACGTTTTCTGAAGAGCAGTTTAAGGAATTGGCTTTAGGCTTGGAGAGAAGCAAGTTGAGATTTTTGTGGGTTGTGAGGAGTCAGCTGGATTTGGAGGTACTGCTACCAGAAGGGTTCTTGGAGAGGACCAAAGATAGAGGTCTTGTAGTCACGTCTTGGGCGCCACAGGTTGCTATTCTAAGCCATGAATCTGTGGGTGGGTTTGTGACTCACTGTGGCTGGAACTCGATCACTGAAGCAGTGACTTATGGAGTGCCTATGGTGTCTTGGCCTTTGTATTCCGAGCAGGAAGTGAACAGTGTGGTGTTGGTGGAGGAAATGAAGCTGGCAATACCGATATTTGAGGTGCTGTCCAAGTCAAAACAAGGGTTGGTGAGTGCAGATGAGGTTGAGAAGAAGGTGTTGCGGTTGATGGACATGGAGTCGGAAGAAGGGAAAAGTCTTAGAGAAAGGTGTCAAGCTGTCAAGGCAATGGGTTTGGCTGCTTGGAGAAATGGTGGCTCATCCTTCACTTCTTTTTCAGAGCTGGTAAGTTCTTGGATGCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

464

Amino Acids

51.64

Weight (kDa)

5.6

Isoelectric Point (pI)

49.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 267 - 409 2e-21 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 608
AccB1I GGYRCC 1 cut(s) 1006
AccI GTMKAC 1 cut(s) 120
AccII CGCG 1 cut(s) 726
AciI CCGC 4 cut(s) 541, 689, 753, 1252
AclWI GGATC 4 cut(s) 46, 521, 534, 739
AcuI CTGAAG 2 cut(s) 876, 1101
AcyI GRCGYC 2 cut(s) 237, 1007
AfaI GTAC 5 cut(s) 350, 422, 824, 847, 945
AfeI AGCGCT 1 cut(s) 504
AfiI CCNNNNNNNGG 2 cut(s) 547, 817
AgsI TTSAA 1 cut(s) 460
AhdI GACNNNNNGTC 1 cut(s) 1267
AjiI CACGTC 2 cut(s) 333, 999
AjnI CCWGG 1 cut(s) 34
AjuI GAANNNNNNNTTGG 2 cut(s) 760, 792
AluBI AGCT 6 cut(s) 140, 456, 931, 1171, 1307, 1372
AluI AGCT 6 cut(s) 140, 456, 931, 1171, 1307, 1372
Alw21I GWGCWC 1 cut(s) 142
AlwI GGATC 4 cut(s) 46, 521, 534, 739
Ama87I CYCGRG 2 cut(s) 135, 636
Aor51HI AGCGCT 1 cut(s) 504
AoxI GGCC 2 cut(s) 648, 1115
ApeKI GCWGC 2 cut(s) 802, 1328
AspLEI GCGC 3 cut(s) 398, 505, 1009
AspS9I GGNCC 3 cut(s) 463, 707, 972
AsuC2I CCSGG 2 cut(s) 362, 492
AsuHPI GGTGA 2 cut(s) 24, 1231
AvaI CYCGRG 2 cut(s) 135, 636
AvaII GGWCC 3 cut(s) 463, 707, 972
BamHI GGATCC 1 cut(s) 526
BanI GGYRCC 1 cut(s) 1006
BanII GRGCYC 1 cut(s) 142
BarI GAAGNNNNNNTAC 2 cut(s) 829, 861
BbsI GAAGAC 1 cut(s) 578
Bbv12I GWGCWC 1 cut(s) 142
BbvI GCAGC 2 cut(s) 814, 1315
BccI CCATC 5 cut(s) 113, 174, 200, 626, 1252
BceAI ACGGC 1 cut(s) 676
BciT130I CCWGG 1 cut(s) 36
BclI TGATCA 3 cut(s) 181, 439, 559
BcnI CCSGG 2 cut(s) 362, 492
BfaI CTAG 2 cut(s) 68, 143
BfoI RGCGCY 2 cut(s) 506, 1010
BisI GCNGC 2 cut(s) 803, 1329
BlsI GCNGC 2 cut(s) 804, 1330
Bme1390I CCNGG 3 cut(s) 36, 362, 492
Bme18I GGWCC 3 cut(s) 463, 707, 972
BmeRI GACNNNNNGTC 1 cut(s) 1267
BmeT110I CYCGRG 2 cut(s) 135, 636
BmgBI CACGTC 2 cut(s) 333, 999
BmgT120I GGNCC 3 cut(s) 463, 707, 972
BmiI GGNNCC 3 cut(s) 55, 528, 1008
BmrFI CCNGG 3 cut(s) 36, 362, 492
BmsI GCATC 2 cut(s) 38, 1377
BpiI GAAGAC 1 cut(s) 578
BpuEI CTTGAG 2 cut(s) 275, 650
BpuMI CCSGG 2 cut(s) 362, 492
BsaBI GATNNNNATC 1 cut(s) 564
BsaHI GRCGYC 2 cut(s) 237, 1007
BsaJI CCNNGG 2 cut(s) 508, 748
BsaXI ACNNNNNCTCC 2 cut(s) 1327, 1357
Bsc4I CCNNNNNNNGG 2 cut(s) 547, 817
Bse3DI GCAATG 1 cut(s) 1323
Bse8I GATNNNNATC 1 cut(s) 564
BseBI CCWGG 1 cut(s) 36
BseDI CCNNGG 2 cut(s) 508, 748
BseGI GGATG 4 cut(s) 618, 802, 1349, 1392
BseJI GATNNNNATC 1 cut(s) 564
BseLI CCNNNNNNNGG 2 cut(s) 547, 817
BseMI GCAATG 1 cut(s) 1323
BseRI GAGGAG 1 cut(s) 937
BseXI GCAGC 2 cut(s) 814, 1315
BsgI GTGCAG 1 cut(s) 1245
Bsh1236I CGCG 1 cut(s) 726
Bsh1285I CGRYCG 2 cut(s) 541, 724
BshFI GGCC 2 cut(s) 650, 1117
BshNI GGYRCC 1 cut(s) 1006
BsiEI CGRYCG 2 cut(s) 541, 724
BsiHKAI GWGCWC 1 cut(s) 142
BsiHKCI CYCGRG 2 cut(s) 135, 636
BsiSI CCGG 5 cut(s) 362, 449, 491, 524, 811
BslFI GGGAC 1 cut(s) 254
BslI CCNNNNNNNGG 2 cut(s) 547, 817
BsmFI GGGAC 1 cut(s) 254
BsnI GGCC 2 cut(s) 650, 1117
BsoBI CYCGRG 2 cut(s) 135, 636
Bsp1286I GDGCHC 1 cut(s) 142
Bsp143I GATC 9 cut(s) 38, 75, 181, 439, 526, 559, 721, 744, 1074
Bsp68I TCGCGA 1 cut(s) 726
BspACI CCGC 4 cut(s) 541, 689, 753, 1252
BspANI GGCC 2 cut(s) 650, 1117
BspFNI CGCG 1 cut(s) 726
BspLI GGNNCC 3 cut(s) 55, 528, 1008
BspPI GGATC 4 cut(s) 46, 521, 534, 739
BspQI GCTCTTC 1 cut(s) 852
BspT107I GGYRCC 1 cut(s) 1006
BsrDI GCAATG 1 cut(s) 1323
BssECI CCNNGG 2 cut(s) 508, 748
BssMI GATC 9 cut(s) 38, 75, 181, 439, 526, 559, 721, 744, 1074
BssNI GRCGYC 2 cut(s) 237, 1007
BssT1I CCWWGG 1 cut(s) 748
Bst2UI CCWGG 1 cut(s) 36
Bst4CI ACNGT 8 cut(s) 61, 112, 268, 348, 711, 776, 1061, 1145
Bst6I CTCTTC 2 cut(s) 181, 852
BstACI GRCGYC 2 cut(s) 237, 1007
BstC8I GCNNGC 3 cut(s) 501, 515, 1173
BstDEI CTNAG 2 cut(s) 1025, 1289
BstF5I GGATG 4 cut(s) 618, 802, 1349, 1392
BstFNI CGCG 1 cut(s) 726
BstH2I RGCGCY 2 cut(s) 506, 1010
BstHHI GCGC 3 cut(s) 398, 505, 1009
BstKTI GATC 9 cut(s) 41, 78, 184, 442, 529, 562, 724, 747, 1077
BstMBI GATC 9 cut(s) 38, 75, 181, 439, 526, 559, 721, 744, 1074
BstMCI CGRYCG 2 cut(s) 541, 724
BstMWI GCNNNNNNNGC 4 cut(s) 647, 799, 837, 1313
BstNI CCWGG 1 cut(s) 36
BstSCI CCNGG 3 cut(s) 34, 360, 490
BstUI CGCG 1 cut(s) 726
BstV1I GCAGC 2 cut(s) 814, 1315
BstV2I GAAGAC 1 cut(s) 578
BstX2I RGATCY 1 cut(s) 526
BstYI RGATCY 1 cut(s) 526
BsuRI GGCC 2 cut(s) 650, 1117
BtrI CACGTC 2 cut(s) 333, 999
BtsCI GGATG 4 cut(s) 618, 802, 1349, 1392
BtsI GCAGTG 2 cut(s) 345, 1092
BtsIMutI CAGTG 5 cut(s) 345, 1057, 1077, 1092, 1150
BtuMI TCGCGA 1 cut(s) 726
Cac8I GCNNGC 3 cut(s) 501, 515, 1173
CfoI GCGC 3 cut(s) 398, 505, 1009
Cfr13I GGNCC 3 cut(s) 463, 707, 972
CpoI CGGWCCG 1 cut(s) 707
CseI GACGC 1 cut(s) 245
Csp6I GTAC 5 cut(s) 349, 421, 823, 846, 944
CspI CGGWCCG 1 cut(s) 707
CviAII CATG 3 cut(s) 437, 1031, 1264
CviQI GTAC 5 cut(s) 349, 421, 823, 846, 944
DdeI CTNAG 2 cut(s) 1025, 1289
DinI GGCGCC 1 cut(s) 1008
DpnI GATC 9 cut(s) 40, 77, 183, 441, 528, 561, 723, 746, 1076
DpnII GATC 9 cut(s) 38, 75, 181, 439, 526, 559, 721, 744, 1074
DriI GACNNNNNGTC 1 cut(s) 1267
Eam1104I CTCTTC 2 cut(s) 181, 852
Eam1105I GACNNNNNGTC 1 cut(s) 1267
EarI CTCTTC 2 cut(s) 181, 852
EciI GGCGGA 1 cut(s) 678
Ecl136II GAGCTC 1 cut(s) 140
Eco130I CCWWGG 1 cut(s) 748
Eco24I GRGCYC 1 cut(s) 142
Eco47I GGWCC 3 cut(s) 463, 707, 972
Eco47III AGCGCT 1 cut(s) 504
Eco53kI GAGCTC 1 cut(s) 140
Eco57I CTGAAG 2 cut(s) 876, 1101
Eco88I CYCGRG 2 cut(s) 135, 636
EcoICRI GAGCTC 1 cut(s) 140
EcoO109I RGGNCCY 1 cut(s) 463
EcoRII CCWGG 1 cut(s) 34
EcoT14I CCWWGG 1 cut(s) 748
EcoT38I GRGCYC 1 cut(s) 142
EgeI GGCGCC 1 cut(s) 1008
EheI GGCGCC 1 cut(s) 1008
ErhI CCWWGG 1 cut(s) 748
FaeI CATG 3 cut(s) 440, 1034, 1267
FaqI GGGAC 1 cut(s) 254
FatI CATG 3 cut(s) 436, 1030, 1263
FauNDI CATATG 1 cut(s) 573
FbaI TGATCA 3 cut(s) 181, 439, 559
FblI GTMKAC 1 cut(s) 120
Fnu4HI GCNGC 2 cut(s) 803, 1329
FokI GGATG 3 cut(s) 605, 809, 1336
FriOI GRGCYC 1 cut(s) 142
Fsp4HI GCNGC 2 cut(s) 803, 1329
FspBI CTAG 2 cut(s) 68, 143
GlaI GCGC 3 cut(s) 397, 504, 1008
GluI GCNGC 2 cut(s) 803, 1329
HaeII RGCGCY 2 cut(s) 506, 1010
HaeIII GGCC 2 cut(s) 650, 1117
HapII CCGG 5 cut(s) 362, 449, 491, 524, 811
HgaI GACGC 1 cut(s) 245
HhaI GCGC 3 cut(s) 398, 505, 1009
Hin1I GRCGYC 2 cut(s) 237, 1007
Hin1II CATG 3 cut(s) 440, 1034, 1267
Hin6I GCGC 3 cut(s) 396, 503, 1007
HinP1I GCGC 3 cut(s) 396, 503, 1007
HincII GTYRAC 1 cut(s) 121
HindII GTYRAC 1 cut(s) 121
HinfI GANTC 5 cut(s) 728, 925, 1034, 1054, 1268
HpaII CCGG 5 cut(s) 362, 449, 491, 524, 811
HphI GGTGA 2 cut(s) 24, 1231
Hpy166II GTNNAC 3 cut(s) 121, 823, 1141
Hpy188I TCNGA 9 cut(s) 181, 509, 707, 721, 733, 856, 1129, 1273, 1369
Hpy188III TCNNGA 3 cut(s) 292, 536, 725
Hpy8I GTNNAC 3 cut(s) 121, 823, 1141
Hpy99I CGWCG 3 cut(s) 239, 476, 479
HpyAV CCTTC 7 cut(s) 208, 334, 653, 950, 1237, 1271, 1363
HpyCH4III ACNGT 8 cut(s) 61, 112, 268, 348, 711, 776, 1061, 1145
HpyCH4IV ACGT 5 cut(s) 332, 477, 782, 848, 998
HpyCH4V TGCA 3 cut(s) 343, 1226, 1390
HpyF10VI GCNNNNNNNGC 4 cut(s) 647, 799, 837, 1313
HpyF3I CTNAG 2 cut(s) 1025, 1289
HpySE526I ACGT 5 cut(s) 332, 477, 782, 848, 998
Hsp92I GRCGYC 2 cut(s) 237, 1007
Hsp92II CATG 3 cut(s) 440, 1034, 1267
HspAI GCGC 3 cut(s) 396, 503, 1007
KasI GGCGCC 1 cut(s) 1006
Ksp22I TGATCA 3 cut(s) 181, 439, 559
Kzo9I GATC 9 cut(s) 38, 75, 181, 439, 526, 559, 721, 744, 1074
LguI GCTCTTC 1 cut(s) 852
LmnI GCTCC 1 cut(s) 510
Lsp1109I GCAGC 2 cut(s) 814, 1315
LweI GCATC 2 cut(s) 38, 1377
MaeI CTAG 2 cut(s) 68, 143
MaeII ACGT 5 cut(s) 332, 477, 782, 848, 998
MaeIII GTNAC 3 cut(s) 994, 1051, 1087
MalI GATC 9 cut(s) 40, 77, 183, 441, 528, 561, 723, 746, 1076
MboI GATC 9 cut(s) 38, 75, 181, 439, 526, 559, 721, 744, 1074
MboII GAAGA 8 cut(s) 120, 161, 168, 193, 578, 869, 1252, 1286
MflI RGATCY 1 cut(s) 526
MhlI GDGCHC 1 cut(s) 142
MluCI AATT 3 cut(s) 148, 603, 872
Mly113I GGCGCC 1 cut(s) 1007
MlyI GAGTC 4 cut(s) 722, 934, 1048, 1277
MmeI TCCRAC 1 cut(s) 1251
MseI TTAA 2 cut(s) 263, 867
MspA1I CMGCKG 1 cut(s) 931
MspI CCGG 5 cut(s) 362, 449, 491, 524, 811
MspR9I CCNGG 3 cut(s) 36, 362, 492
MvaI CCWGG 1 cut(s) 36
MvnI CGCG 1 cut(s) 726
MwoI GCNNNNNNNGC 4 cut(s) 647, 799, 837, 1313
NarI GGCGCC 1 cut(s) 1007
NciI CCSGG 2 cut(s) 362, 492
NdeI CATATG 1 cut(s) 573
NdeII GATC 9 cut(s) 38, 75, 181, 439, 526, 559, 721, 744, 1074
NlaIII CATG 3 cut(s) 440, 1034, 1267
NlaIV GGNNCC 3 cut(s) 55, 528, 1008
NmeAIII GCCGAG 1 cut(s) 831
NmuCI GTSAC 3 cut(s) 994, 1051, 1087
NruI TCGCGA 1 cut(s) 726
PaeR7I CTCGAG 2 cut(s) 135, 636
PciSI GCTCTTC 1 cut(s) 852
PcsI WCGNNNNNNNCGW 1 cut(s) 543
PfeI GAWTC 1 cut(s) 1034
PfoI TCCNGGA 1 cut(s) 490
PkrI GCNGC 2 cut(s) 804, 1330
Ple19I CGATCG 1 cut(s) 724
PleI GAGTC 4 cut(s) 722, 933, 1048, 1276
PluTI GGCGCC 1 cut(s) 1010
PpsI GAGTC 4 cut(s) 722, 933, 1048, 1276
PpuMI RGGWCCY 1 cut(s) 463
PsiI TTATAA 1 cut(s) 608
Psp124BI GAGCTC 1 cut(s) 142
Psp5II RGGWCCY 1 cut(s) 463
Psp6I CCWGG 1 cut(s) 34
PspGI CCWGG 1 cut(s) 34
PspN4I GGNNCC 3 cut(s) 55, 528, 1008
PspPI GGNCC 3 cut(s) 463, 707, 972
PspPPI RGGWCCY 1 cut(s) 463
PspXI VCTCGAGB 2 cut(s) 135, 636
PsuI RGATCY 1 cut(s) 526
PvuI CGATCG 1 cut(s) 724
PvuII CAGCTG 1 cut(s) 931
RruI TCGCGA 1 cut(s) 726
RsaI GTAC 5 cut(s) 350, 422, 824, 847, 945
RsaNI GTAC 5 cut(s) 349, 421, 823, 846, 944
Rsr2I CGGWCCG 1 cut(s) 707
RsrII CGGWCCG 1 cut(s) 707
SacI GAGCTC 1 cut(s) 142
SalI GTCGAC 1 cut(s) 119
SapI GCTCTTC 1 cut(s) 852
SaqAI TTAA 2 cut(s) 263, 867
SatI GCNGC 2 cut(s) 803, 1329
Sau3AI GATC 9 cut(s) 38, 75, 181, 439, 526, 559, 721, 744, 1074
Sau96I GGNCC 3 cut(s) 463, 707, 972
SchI GAGTC 4 cut(s) 722, 934, 1048, 1277
ScrFI CCNGG 3 cut(s) 36, 362, 492
SduI GDGCHC 1 cut(s) 142
SfaNI GCATC 2 cut(s) 38, 1377
SfoI GGCGCC 1 cut(s) 1008
Sfr274I CTCGAG 2 cut(s) 135, 636
SinI GGWCC 3 cut(s) 463, 707, 972
SlaI CTCGAG 2 cut(s) 135, 636
SmlI CTYRAG 4 cut(s) 135, 290, 629, 636
SmoI CTYRAG 4 cut(s) 135, 290, 629, 636
Sse9I AATT 3 cut(s) 148, 603, 872
SsiI CCGC 4 cut(s) 541, 689, 753, 1252
SspDI GGCGCC 1 cut(s) 1006
SspMI CTAG 2 cut(s) 68, 143
SstI GAGCTC 1 cut(s) 142
StyD4I CCNGG 3 cut(s) 34, 360, 490
StyI CCWWGG 1 cut(s) 748
TaaI ACNGT 8 cut(s) 61, 112, 268, 348, 711, 776, 1061, 1145
TaiI ACGT 5 cut(s) 335, 480, 785, 851, 1001
TaqI TCGA 9 cut(s) 63, 120, 136, 252, 537, 637, 682, 743, 1073
TasI AATT 3 cut(s) 148, 603, 872
TfiI GAWTC 1 cut(s) 1034
Tru1I TTAA 2 cut(s) 263, 867
Tru9I TTAA 2 cut(s) 263, 867
TscAI CASTG 5 cut(s) 345, 1064, 1084, 1092, 1150
TseFI GTSAC 3 cut(s) 994, 1051, 1087
TseI GCWGC 2 cut(s) 802, 1328
Tsp45I GTSAC 3 cut(s) 994, 1051, 1087
TspDTI ATGAA 5 cut(s) 17, 316, 703, 1047, 1181
TspRI CASTG 5 cut(s) 345, 1064, 1084, 1092, 1150
VpaK11BI GGWCC 3 cut(s) 463, 707, 972
XcmI CCANNNNNNNNNTGG 1 cut(s) 112
XhoI CTCGAG 2 cut(s) 135, 636
XmiI GTMKAC 1 cut(s) 120
XspI CTAG 2 cut(s) 68, 143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.