Reverse transcriptase-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g25671 FvH4_3g25680 |
| prunus_persica | Prupe.6G136900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0046041 RchiOBHm_Chr5g0046051 |
| rosa_laevigata | RLG00000034387 RLG00000034392 RLG00000034563 RLG00000034568 |
| rosa_multiflora | Rmu_co8238891.1_g000001 Rmu_sc0001035.1_g000030 Rmu_sc0001035.1_g000034 Rmu_sc0001035.1_g000047 Rmu_sc0001035.1_g000051 |
| rosa_roxburghii | Rroxscaffold_1G00035340 |
| rosa_rugosa | Rorug05G0226000 Rorug05G0226100 |
| rosa_samantha | Rh4BG171700 Rh5AG306600 Rh5AG306700 Rh5BG315300 Rh5BG315400 Rh5CG341500 Rh5CG341600 Rh5DG325400 |
| rosa_wichuraiana | Rw5G028680 Rw5G028700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 123, 254 |
| AciI | CCGC | 2 cut(s) | 152, 398 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 123, 254 |
| AflIII | ACRYGT | 1 cut(s) | 142 |
| AgsI | TTSAA | 2 cut(s) | 265, 297 |
| AjiI | CACGTC | 1 cut(s) | 305 |
| AluBI | AGCT | 1 cut(s) | 314 |
| AluI | AGCT | 1 cut(s) | 314 |
| Alw21I | GWGCWC | 2 cut(s) | 376, 412 |
| Alw44I | GTGCAC | 2 cut(s) | 372, 408 |
| ApaLI | GTGCAC | 2 cut(s) | 372, 408 |
| ApeKI | GCWGC | 1 cut(s) | 359 |
| AspLEI | GCGC | 1 cut(s) | 359 |
| AspS9I | GGNCC | 1 cut(s) | 240 |
| AsuII | TTCGAA | 1 cut(s) | 328 |
| AvaII | GGWCC | 1 cut(s) | 240 |
| AxyI | CCTNAGG | 1 cut(s) | 210 |
| BaeGI | GKGCMC | 2 cut(s) | 376, 412 |
| BbsI | GAAGAC | 1 cut(s) | 64 |
| Bbv12I | GWGCWC | 2 cut(s) | 376, 412 |
| BbvI | GCAGC | 1 cut(s) | 346 |
| BccI | CCATC | 1 cut(s) | 272 |
| BciVI | GTATCC | 1 cut(s) | 49 |
| BfaI | CTAG | 1 cut(s) | 363 |
| BfmI | CTRYAG | 1 cut(s) | 413 |
| BfoI | RGCGCY | 1 cut(s) | 360 |
| BfuI | GTATCC | 1 cut(s) | 49 |
| BisI | GCNGC | 1 cut(s) | 360 |
| BlsI | GCNGC | 1 cut(s) | 361 |
| Bme18I | GGWCC | 1 cut(s) | 240 |
| BmgBI | CACGTC | 1 cut(s) | 305 |
| BmgT120I | GGNCC | 1 cut(s) | 240 |
| BpiI | GAAGAC | 1 cut(s) | 64 |
| BpmI | CTGGAG | 1 cut(s) | 50 |
| Bpu14I | TTCGAA | 1 cut(s) | 328 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 123, 254 |
| Bse1I | ACTGG | 1 cut(s) | 33 |
| Bse21I | CCTNAGG | 1 cut(s) | 210 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 123, 254 |
| BseNI | ACTGG | 1 cut(s) | 33 |
| BseRI | GAGGAG | 3 cut(s) | 118, 197, 324 |
| BseSI | GKGCMC | 2 cut(s) | 376, 412 |
| BseXI | GCAGC | 1 cut(s) | 346 |
| BsgI | GTGCAG | 1 cut(s) | 254 |
| BsiHKAI | GWGCWC | 2 cut(s) | 376, 412 |
| BsiSI | CCGG | 1 cut(s) | 354 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 123, 254 |
| Bsp119I | TTCGAA | 1 cut(s) | 328 |
| Bsp1286I | GDGCHC | 2 cut(s) | 376, 412 |
| BspACI | CCGC | 2 cut(s) | 152, 398 |
| BspMAI | CTGCAG | 1 cut(s) | 417 |
| BspT104I | TTCGAA | 1 cut(s) | 328 |
| BsrI | ACTGG | 1 cut(s) | 33 |
| Bst4CI | ACNGT | 2 cut(s) | 335, 378 |
| BstBI | TTCGAA | 1 cut(s) | 328 |
| BstDEI | CTNAG | 1 cut(s) | 210 |
| BstH2I | RGCGCY | 1 cut(s) | 360 |
| BstHHI | GCGC | 1 cut(s) | 359 |
| BstNSI | RCATGY | 1 cut(s) | 146 |
| BstSFI | CTRYAG | 1 cut(s) | 413 |
| BstSLI | GKGCMC | 2 cut(s) | 376, 412 |
| BstV1I | GCAGC | 1 cut(s) | 346 |
| BstV2I | GAAGAC | 1 cut(s) | 64 |
| Bsu36I | CCTNAGG | 1 cut(s) | 210 |
| BsuI | GTATCC | 1 cut(s) | 49 |
| BtrI | CACGTC | 1 cut(s) | 305 |
| BtsI | GCAGTG | 2 cut(s) | 242, 410 |
| BtsIMutI | CAGTG | 3 cut(s) | 242, 340, 410 |
| CfoI | GCGC | 1 cut(s) | 359 |
| Cfr13I | GGNCC | 1 cut(s) | 240 |
| CviAII | CATG | 2 cut(s) | 91, 143 |
| CviJI | RGCY | 4 cut(s) | 5, 25, 314, 367 |
| CviKI_1 | RGCY | 4 cut(s) | 5, 25, 314, 367 |
| DdeI | CTNAG | 1 cut(s) | 210 |
| DraI | TTTAAA | 2 cut(s) | 48, 190 |
| Eco47I | GGWCC | 1 cut(s) | 240 |
| Eco81I | CCTNAGG | 1 cut(s) | 210 |
| FaeI | CATG | 2 cut(s) | 94, 146 |
| FaiI | YATR | 7 cut(s) | 85, 92, 124, 144, 180, 201, 370 |
| FatI | CATG | 2 cut(s) | 90, 142 |
| Fnu4HI | GCNGC | 1 cut(s) | 360 |
| Fsp4HI | GCNGC | 1 cut(s) | 360 |
| FspBI | CTAG | 1 cut(s) | 363 |
| GlaI | GCGC | 1 cut(s) | 358 |
| GluI | GCNGC | 1 cut(s) | 360 |
| GsuI | CTGGAG | 1 cut(s) | 50 |
| HaeII | RGCGCY | 1 cut(s) | 360 |
| HapII | CCGG | 1 cut(s) | 354 |
| HhaI | GCGC | 1 cut(s) | 359 |
| Hin1II | CATG | 2 cut(s) | 94, 146 |
| Hin6I | GCGC | 1 cut(s) | 357 |
| HinP1I | GCGC | 1 cut(s) | 357 |
| HincII | GTYRAC | 1 cut(s) | 381 |
| HindII | GTYRAC | 1 cut(s) | 381 |
| HpaII | CCGG | 1 cut(s) | 354 |
| Hpy166II | GTNNAC | 4 cut(s) | 240, 374, 381, 410 |
| Hpy188III | TCNNGA | 1 cut(s) | 17 |
| Hpy8I | GTNNAC | 4 cut(s) | 240, 374, 381, 410 |
| Hpy99I | CGWCG | 2 cut(s) | 306, 326 |
| HpyCH4III | ACNGT | 2 cut(s) | 335, 378 |
| HpyCH4IV | ACGT | 1 cut(s) | 304 |
| HpyCH4V | TGCA | 4 cut(s) | 235, 374, 410, 415 |
| HpyF3I | CTNAG | 1 cut(s) | 210 |
| HpySE526I | ACGT | 1 cut(s) | 304 |
| Hsp92II | CATG | 2 cut(s) | 94, 146 |
| HspAI | GCGC | 1 cut(s) | 357 |
| LmnI | GCTCC | 2 cut(s) | 105, 311 |
| LpnPI | CCDG | 4 cut(s) | 2, 14, 300, 367 |
| Lsp1109I | GCAGC | 1 cut(s) | 346 |
| MaeI | CTAG | 1 cut(s) | 363 |
| MaeII | ACGT | 1 cut(s) | 304 |
| MaeIII | GTNAC | 1 cut(s) | 214 |
| MboII | GAAGA | 1 cut(s) | 64 |
| MhlI | GDGCHC | 2 cut(s) | 376, 412 |
| MluCI | AATT | 4 cut(s) | 10, 43, 59, 271 |
| MnlI | CCTC | 5 cut(s) | 96, 175, 302, 331, 394 |
| MseI | TTAA | 3 cut(s) | 47, 62, 189 |
| MspI | CCGG | 1 cut(s) | 354 |
| NlaIII | CATG | 2 cut(s) | 94, 146 |
| NspI | RCATGY | 1 cut(s) | 146 |
| NspV | TTCGAA | 1 cut(s) | 328 |
| PciI | ACATGT | 1 cut(s) | 142 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 123, 254 |
| PkrI | GCNGC | 1 cut(s) | 361 |
| PscI | ACATGT | 1 cut(s) | 142 |
| PspPI | GGNCC | 1 cut(s) | 240 |
| PstI | CTGCAG | 1 cut(s) | 417 |
| SaqAI | TTAA | 3 cut(s) | 47, 62, 189 |
| SatI | GCNGC | 1 cut(s) | 360 |
| Sau96I | GGNCC | 1 cut(s) | 240 |
| SduI | GDGCHC | 2 cut(s) | 376, 412 |
| SetI | ASST | 7 cut(s) | 72, 211, 216, 295, 307, 316, 386 |
| SfcI | CTRYAG | 1 cut(s) | 413 |
| SfuI | TTCGAA | 1 cut(s) | 328 |
| SinI | GGWCC | 1 cut(s) | 240 |
| Sse9I | AATT | 4 cut(s) | 10, 43, 59, 271 |
| SsiI | CCGC | 2 cut(s) | 152, 398 |
| SspMI | CTAG | 1 cut(s) | 363 |
| TaaI | ACNGT | 2 cut(s) | 335, 378 |
| TaiI | ACGT | 1 cut(s) | 307 |
| TaqI | TCGA | 3 cut(s) | 223, 301, 328 |
| TasI | AATT | 4 cut(s) | 10, 43, 59, 271 |
| Tru1I | TTAA | 3 cut(s) | 47, 62, 189 |
| Tru9I | TTAA | 3 cut(s) | 47, 62, 189 |
| TscAI | CASTG | 3 cut(s) | 242, 340, 417 |
| TseI | GCWGC | 1 cut(s) | 359 |
| TspGWI | ACGGA | 2 cut(s) | 378, 383 |
| TspRI | CASTG | 3 cut(s) | 242, 340, 417 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 123, 254 |
| VneI | GTGCAC | 2 cut(s) | 372, 408 |
| VpaK11BI | GGWCC | 1 cut(s) | 240 |
| XceI | RCATGY | 1 cut(s) | 146 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 255 |
| XspI | CTAG | 1 cut(s) | 363 |