RLG00000034563

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0006395
Physical Location & Seq
Reverse (-)
45046835 .. 45048487
1653 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034563

Sequence Viewer

Length: 1248 bp
ATGGCGGAAATGAAACAAAGCATAGTGTTATACCCAGCATCACCTGGATCGCACCACATGGTTTCCATAGTCGAACTAGGAAAATTCATCTCCCAACGCCACCCCAACTTGTCCATAACAGTCTTGCTCGACACATCTTCCCCTCTCGCCAAATCCTCATACATCAACCATCTTCTCTCTTCTAACTCTGATCCCGATCAAGCCCGCATCTCCTTCTTCACCTCCTGCGCCTCTGCTCTTGCTCTGTTTCTGTACTTCCCCACTGTCCATGATCAAACGCCGGAGAGCTTCAAGGACCGAAACGACGACGTTGTTGAGTCTCCGGGATTGCCAGCGCTCCGAGGCTCCCAATTGCCGGATCCTATTCTCGACCGCAACGAGGCTGAATATGATTTCTTTCTCTATTTTGCTTCCTGTCTTCCAAAAGCGAAGGGAATTATAACAAACACCTTCCAAGAACTTGAGCCTCGAGCAATCAAGGCCATAAAGGACGGTGTTTATGTTCCTAATCATCAAACCCCGCCTTTATATTACATCAGGCCGTTGATTTCCGACTCTGAAAATAGGTCGATCCAAGGCGGTTCGCCTATGCCAACTAACTGTTCCACGCTATGGCTCGATAAGCAGCCGAGCCAGAGTGTGGTGTACTTATGCTTTGGAAGCAGAGGTACGTTTTCTGATGAGCAGTTTAAGGAATTGGCTATAGGCTTGGAGAGAAGCAAGTTGAGATTTTTGTGGGTTGTGAAGAGTCAACTGGATTTGGAGGTACTAATGCCACAAGGGTTCTTGGAGAGGACCAAAGATAGAGGTCTTGTAGTCACGTCTTGGGCGCCACAGGTTGCTATTCTAAGTCATGAATCTGTGGGTGGGTTTGTGACTCACTGTGGGTGGAACTCGATCACTGAAGCAGTGACTTATGGAGTGCCTATGGTGGCTTGGCCTTTGTATTCCGAGCAGAAAGTGAACAGTGTGGTGTTGGTGGAGGAAATGAAGCTGGCAATACCGATATTTGAGGTGCTGTCGAAGTCAAAACAAGGGTTGGTGAGTGCAAATGAGGTGGAGAAGAAGGTGTTGCGGTTGATGGACATGGAGTCGGAAGAAGGGAAAAGTCTAAGAGAAAGGTGTCAAGCTGTCAAGGCAATGGGTTTGGCTGCTTGGAGAAATGGTGGCTCATCCTTCACTTCTTTTTCAGAGCTGCCATTGTGTGGAATATGTGTCTTCTATGATGTAGTTGCATCTGATGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

416

Amino Acids

46.09

Weight (kDa)

5.59

Isoelectric Point (pI)

44.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 207 - 350 1.3e-21 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 440
AccB1I GGYRCC 1 cut(s) 829
AccB7I CCANNNNNTGG 3 cut(s) 612, 640, 1205
AciI CCGC 6 cut(s) 5, 205, 373, 521, 579, 1075
AclWI GGATC 5 cut(s) 55, 185, 353, 366, 565
AcsI RAATTY 1 cut(s) 83
AcuI CTGAAG 1 cut(s) 924
AcyI GRCGYC 1 cut(s) 830
AfaI GTAC 4 cut(s) 254, 647, 670, 768
AfeI AGCGCT 1 cut(s) 336
AfiI CCNNNNNNNGG 5 cut(s) 355, 379, 612, 640, 1205
AgsI TTSAA 1 cut(s) 292
AhdI GACNNNNNGTC 1 cut(s) 1090
AjiI CACGTC 1 cut(s) 822
AjnI CCWGG 1 cut(s) 43
AjuI GAANNNNNNNTTGG 2 cut(s) 586, 618
AluBI AGCT 4 cut(s) 288, 994, 1130, 1195
AluI AGCT 4 cut(s) 288, 994, 1130, 1195
Alw26I GTCTC 1 cut(s) 324
AlwI GGATC 5 cut(s) 55, 185, 353, 366, 565
Ama87I CYCGRG 1 cut(s) 468
Aor51HI AGCGCT 1 cut(s) 336
AoxI GGCC 3 cut(s) 480, 539, 938
ApeKI GCWGC 3 cut(s) 625, 1151, 1195
ApoI RAATTY 1 cut(s) 83
AspLEI GCGC 3 cut(s) 230, 337, 832
AspS9I GGNCC 2 cut(s) 295, 795
AsuC2I CCSGG 1 cut(s) 324
AsuHPI GGTGA 3 cut(s) 33, 211, 1054
AvaI CYCGRG 1 cut(s) 468
AvaII GGWCC 2 cut(s) 295, 795
BamHI GGATCC 1 cut(s) 358
BanI GGYRCC 1 cut(s) 829
BarI GAAGNNNNNNTAC 2 cut(s) 652, 684
BbsI GAAGAC 2 cut(s) 410, 1210
BbvI GCAGC 3 cut(s) 637, 1138, 1182
BccI CCATC 2 cut(s) 177, 1075
BceAI ACGGC 1 cut(s) 526
BciT130I CCWGG 1 cut(s) 45
BclI TGATCA 1 cut(s) 271
BcnI CCSGG 1 cut(s) 324
BcoDI GTCTC 1 cut(s) 324
BfaI CTAG 1 cut(s) 77
BfmI CTRYAG 1 cut(s) 702
BfoI RGCGCY 2 cut(s) 338, 833
BisI GCNGC 3 cut(s) 626, 1152, 1196
BlsI GCNGC 3 cut(s) 627, 1153, 1197
Bme1390I CCNGG 2 cut(s) 45, 324
Bme18I GGWCC 2 cut(s) 295, 795
BmeRI GACNNNNNGTC 1 cut(s) 1090
BmeT110I CYCGRG 1 cut(s) 468
BmgBI CACGTC 1 cut(s) 822
BmgT120I GGNCC 2 cut(s) 295, 795
BmiI GGNNCC 3 cut(s) 346, 360, 831
BmrFI CCNGG 2 cut(s) 45, 324
BmsI GCATC 3 cut(s) 47, 216, 1244
BpiI GAAGAC 2 cut(s) 410, 1210
BpuEI CTTGAG 1 cut(s) 482
BpuMI CCSGG 1 cut(s) 324
BsaBI GATNNNNATC 1 cut(s) 195
BsaHI GRCGYC 1 cut(s) 830
BsaJI CCNNGG 2 cut(s) 340, 574
BsaXI ACNNNNNCTCC 2 cut(s) 1150, 1180
Bsc4I CCNNNNNNNGG 5 cut(s) 355, 379, 612, 640, 1205
Bse1I ACTGG 1 cut(s) 759
Bse3DI GCAATG 1 cut(s) 1146
Bse8I GATNNNNATC 1 cut(s) 195
BseBI CCWGG 1 cut(s) 45
BseDI CCNNGG 2 cut(s) 340, 574
BseGI GGATG 1 cut(s) 1172
BseJI GATNNNNATC 1 cut(s) 195
BseLI CCNNNNNNNGG 5 cut(s) 355, 379, 612, 640, 1205
BseMI GCAATG 1 cut(s) 1146
BseNI ACTGG 1 cut(s) 759
BseXI GCAGC 3 cut(s) 637, 1138, 1182
BseYI CCCAGC 1 cut(s) 34
Bsh1285I CGRYCG 1 cut(s) 373
BshFI GGCC 3 cut(s) 482, 541, 940
BshNI GGYRCC 1 cut(s) 829
BsiEI CGRYCG 1 cut(s) 373
BsiHKCI CYCGRG 1 cut(s) 468
BsiSI CCGG 3 cut(s) 281, 323, 356
BslI CCNNNNNNNGG 5 cut(s) 355, 379, 612, 640, 1205
BsmAI GTCTC 1 cut(s) 324
BsnI GGCC 3 cut(s) 482, 541, 940
BsoBI CYCGRG 1 cut(s) 468
Bsp143I GATC 7 cut(s) 47, 190, 196, 271, 358, 570, 897
BspACI CCGC 6 cut(s) 5, 205, 373, 521, 579, 1075
BspANI GGCC 3 cut(s) 482, 541, 940
BspHI TCATGA 1 cut(s) 853
BspLI GGNNCC 3 cut(s) 346, 360, 831
BspPI GGATC 5 cut(s) 55, 185, 353, 366, 565
BspT107I GGYRCC 1 cut(s) 829
BsrDI GCAATG 1 cut(s) 1146
BsrI ACTGG 1 cut(s) 759
BssECI CCNNGG 2 cut(s) 340, 574
BssMI GATC 7 cut(s) 47, 190, 196, 271, 358, 570, 897
BssNI GRCGYC 1 cut(s) 830
BssT1I CCWWGG 1 cut(s) 574
Bst2UI CCWGG 1 cut(s) 45
Bst4CI ACNGT 6 cut(s) 121, 265, 494, 602, 884, 968
Bst6I CTCTTC 2 cut(s) 184, 740
BstACI GRCGYC 1 cut(s) 830
BstC8I GCNNGC 3 cut(s) 205, 333, 996
BstDEI CTNAG 2 cut(s) 848, 1112
BstF5I GGATG 1 cut(s) 1172
BstH2I RGCGCY 2 cut(s) 338, 833
BstHHI GCGC 3 cut(s) 230, 337, 832
BstKTI GATC 7 cut(s) 50, 193, 199, 274, 361, 573, 900
BstMAI GTCTC 1 cut(s) 324
BstMBI GATC 7 cut(s) 47, 190, 196, 271, 358, 570, 897
BstMCI CGRYCG 1 cut(s) 373
BstMWI GCNNNNNNNGC 4 cut(s) 479, 622, 660, 1136
BstNI CCWGG 1 cut(s) 45
BstSCI CCNGG 2 cut(s) 43, 322
BstSFI CTRYAG 1 cut(s) 702
BstV1I GCAGC 3 cut(s) 637, 1138, 1182
BstV2I GAAGAC 2 cut(s) 410, 1210
BstX2I RGATCY 1 cut(s) 358
BstYI RGATCY 1 cut(s) 358
BsuRI GGCC 3 cut(s) 482, 541, 940
BtrI CACGTC 1 cut(s) 822
BtsCI GGATG 1 cut(s) 1172
BtsI GCAGTG 1 cut(s) 915
BtsIMutI CAGTG 5 cut(s) 261, 880, 900, 915, 973
Cac8I GCNNGC 3 cut(s) 205, 333, 996
CciI TCATGA 1 cut(s) 853
CfoI GCGC 3 cut(s) 230, 337, 832
Cfr13I GGNCC 2 cut(s) 295, 795
Csp6I GTAC 4 cut(s) 253, 646, 669, 767
CspCI CAANNNNNGTGG 2 cut(s) 1038, 1073
CviAII CATG 4 cut(s) 58, 269, 854, 1087
CviQI GTAC 4 cut(s) 253, 646, 669, 767
DdeI CTNAG 2 cut(s) 848, 1112
DinI GGCGCC 1 cut(s) 831
DpnI GATC 7 cut(s) 49, 192, 198, 273, 360, 572, 899
DpnII GATC 7 cut(s) 47, 190, 196, 271, 358, 570, 897
DriI GACNNNNNGTC 1 cut(s) 1090
Eam1104I CTCTTC 2 cut(s) 184, 740
Eam1105I GACNNNNNGTC 1 cut(s) 1090
EarI CTCTTC 2 cut(s) 184, 740
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 574
Eco47I GGWCC 2 cut(s) 295, 795
Eco47III AGCGCT 1 cut(s) 336
Eco57I CTGAAG 1 cut(s) 924
Eco88I CYCGRG 1 cut(s) 468
EcoRII CCWGG 1 cut(s) 43
EcoT14I CCWWGG 1 cut(s) 574
EgeI GGCGCC 1 cut(s) 831
EheI GGCGCC 1 cut(s) 831
ErhI CCWWGG 1 cut(s) 574
FaeI CATG 4 cut(s) 61, 272, 857, 1090
FatI CATG 4 cut(s) 57, 268, 853, 1086
FauI CCCGC 2 cut(s) 212, 528
FbaI TGATCA 1 cut(s) 271
Fnu4HI GCNGC 3 cut(s) 626, 1152, 1196
FokI GGATG 1 cut(s) 1159
Fsp4HI GCNGC 3 cut(s) 626, 1152, 1196
FspBI CTAG 1 cut(s) 77
GlaI GCGC 3 cut(s) 229, 336, 831
GluI GCNGC 3 cut(s) 626, 1152, 1196
GsaI CCCAGC 1 cut(s) 38
HaeII RGCGCY 2 cut(s) 338, 833
HaeIII GGCC 3 cut(s) 482, 541, 940
HapII CCGG 3 cut(s) 281, 323, 356
HhaI GCGC 3 cut(s) 230, 337, 832
Hin1I GRCGYC 1 cut(s) 830
Hin1II CATG 4 cut(s) 61, 272, 857, 1090
Hin6I GCGC 3 cut(s) 228, 335, 830
HinP1I GCGC 3 cut(s) 228, 335, 830
HincII GTYRAC 1 cut(s) 752
HindII GTYRAC 1 cut(s) 752
HinfI GANTC 6 cut(s) 317, 554, 748, 857, 877, 1091
HpaII CCGG 3 cut(s) 281, 323, 356
HphI GGTGA 3 cut(s) 33, 211, 1054
Hpy166II GTNNAC 3 cut(s) 646, 752, 964
Hpy188I TCNGA 9 cut(s) 190, 341, 553, 559, 679, 952, 1096, 1192, 1240
Hpy188III TCNNGA 3 cut(s) 194, 368, 854
Hpy8I GTNNAC 3 cut(s) 646, 752, 964
Hpy99I CGWCG 2 cut(s) 308, 311
HpyAV CCTTC 6 cut(s) 223, 424, 460, 1060, 1094, 1186
HpyCH4III ACNGT 6 cut(s) 121, 265, 494, 602, 884, 968
HpyCH4IV ACGT 3 cut(s) 309, 671, 821
HpyCH4V TGCA 2 cut(s) 1049, 1235
HpyF10VI GCNNNNNNNGC 4 cut(s) 479, 622, 660, 1136
HpyF3I CTNAG 2 cut(s) 848, 1112
HpySE526I ACGT 3 cut(s) 309, 671, 821
Hsp92I GRCGYC 1 cut(s) 830
Hsp92II CATG 4 cut(s) 61, 272, 857, 1090
HspAI GCGC 3 cut(s) 228, 335, 830
KasI GGCGCC 1 cut(s) 829
Ksp22I TGATCA 1 cut(s) 271
Kzo9I GATC 7 cut(s) 47, 190, 196, 271, 358, 570, 897
LmnI GCTCC 2 cut(s) 342, 350
Lsp1109I GCAGC 3 cut(s) 637, 1138, 1182
LweI GCATC 3 cut(s) 47, 216, 1244
MaeI CTAG 1 cut(s) 77
MaeII ACGT 3 cut(s) 309, 671, 821
MaeIII GTNAC 3 cut(s) 817, 874, 910
MalI GATC 7 cut(s) 49, 192, 198, 273, 360, 572, 899
MboI GATC 7 cut(s) 47, 190, 196, 271, 358, 570, 897
MboII GAAGA 9 cut(s) 129, 164, 171, 208, 410, 757, 1075, 1109, 1210
MfeI CAATTG 1 cut(s) 350
MflI RGATCY 1 cut(s) 358
MluCI AATT 4 cut(s) 83, 350, 435, 695
Mly113I GGCGCC 1 cut(s) 830
MlyI GAGTC 5 cut(s) 326, 548, 757, 871, 1100
MmeI TCCRAC 2 cut(s) 576, 1074
MseI TTAA 1 cut(s) 690
MspI CCGG 3 cut(s) 281, 323, 356
MspR9I CCNGG 2 cut(s) 45, 324
MunI CAATTG 1 cut(s) 350
MvaI CCWGG 1 cut(s) 45
MwoI GCNNNNNNNGC 4 cut(s) 479, 622, 660, 1136
NarI GGCGCC 1 cut(s) 830
NciI CCSGG 1 cut(s) 324
NdeII GATC 7 cut(s) 47, 190, 196, 271, 358, 570, 897
NlaIII CATG 4 cut(s) 61, 272, 857, 1090
NlaIV GGNNCC 3 cut(s) 346, 360, 831
NmeAIII GCCGAG 1 cut(s) 654
NmuCI GTSAC 3 cut(s) 817, 874, 910
PaeR7I CTCGAG 1 cut(s) 468
PagI TCATGA 1 cut(s) 853
PcsI WCGNNNNNNNCGW 1 cut(s) 375
PfeI GAWTC 1 cut(s) 857
PflMI CCANNNNNTGG 3 cut(s) 612, 640, 1205
PfoI TCCNGGA 1 cut(s) 322
PkrI GCNGC 3 cut(s) 627, 1153, 1197
PleI GAGTC 5 cut(s) 325, 548, 756, 871, 1099
PluTI GGCGCC 1 cut(s) 833
PpsI GAGTC 5 cut(s) 325, 548, 756, 871, 1099
PsiI TTATAA 1 cut(s) 440
Psp6I CCWGG 1 cut(s) 43
PspFI CCCAGC 1 cut(s) 34
PspGI CCWGG 1 cut(s) 43
PspN4I GGNNCC 3 cut(s) 346, 360, 831
PspPI GGNCC 2 cut(s) 295, 795
PspXI VCTCGAGB 1 cut(s) 468
PsuI RGATCY 1 cut(s) 358
RsaI GTAC 4 cut(s) 254, 647, 670, 768
RsaNI GTAC 4 cut(s) 253, 646, 669, 767
SaqAI TTAA 1 cut(s) 690
SatI GCNGC 3 cut(s) 626, 1152, 1196
Sau3AI GATC 7 cut(s) 47, 190, 196, 271, 358, 570, 897
Sau96I GGNCC 2 cut(s) 295, 795
SchI GAGTC 5 cut(s) 326, 548, 757, 871, 1100
ScrFI CCNGG 2 cut(s) 45, 324
SfaNI GCATC 3 cut(s) 47, 216, 1244
SfcI CTRYAG 1 cut(s) 702
SfoI GGCGCC 1 cut(s) 831
Sfr274I CTCGAG 1 cut(s) 468
SinI GGWCC 2 cut(s) 295, 795
SlaI CTCGAG 1 cut(s) 468
SmlI CTYRAG 2 cut(s) 461, 468
SmoI CTYRAG 2 cut(s) 461, 468
Sse9I AATT 4 cut(s) 83, 350, 435, 695
SsiI CCGC 6 cut(s) 5, 205, 373, 521, 579, 1075
SspDI GGCGCC 1 cut(s) 829
SspMI CTAG 1 cut(s) 77
StyD4I CCNGG 2 cut(s) 43, 322
StyI CCWWGG 1 cut(s) 574
TaaI ACNGT 6 cut(s) 121, 265, 494, 602, 884, 968
TaiI ACGT 3 cut(s) 312, 674, 824
TaqI TCGA 8 cut(s) 72, 129, 369, 469, 569, 618, 896, 1022
TaqII GACCGA 1 cut(s) 312
TasI AATT 4 cut(s) 83, 350, 435, 695
TatI WGTACW 2 cut(s) 252, 645
TfiI GAWTC 1 cut(s) 857
Tru1I TTAA 1 cut(s) 690
Tru9I TTAA 1 cut(s) 690
TscAI CASTG 5 cut(s) 268, 887, 907, 915, 973
TseFI GTSAC 3 cut(s) 817, 874, 910
TseI GCWGC 3 cut(s) 625, 1151, 1195
Tsp45I GTSAC 3 cut(s) 817, 874, 910
TspDTI ATGAA 4 cut(s) 26, 76, 870, 1004
TspRI CASTG 5 cut(s) 268, 887, 907, 915, 973
Van91I CCANNNNNTGG 3 cut(s) 612, 640, 1205
VpaK11BI GGWCC 2 cut(s) 295, 795
XapI RAATTY 1 cut(s) 83
XhoI CTCGAG 1 cut(s) 468
XspI CTAG 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.