Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0006395

Physical Location & Seq

Genomic Coordinates Reverse (-)

43826790 .. 43842477

Gene Structure 15688 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG306600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGGCGGGAATGAAACAAAGCATAGTGTTATACCCAGCATCACCTGGATCGCACCACATGGTTTCCATAGTCGAACTAGGAAAACTCATCTCCCAACGCCACCCCAACTTGTCCATAACAGTCTTGCTCGACACATCTTCCCCTCTCGCCAAATCCTCATACATCAACCATCTTCTCTCTTCTAACTCTGATCCCGATCAAGCCCGCATCTCCTTCTTCACTCTCCCCGCACTCAACCTCCCCCAACCCGACGCCCAAACCAGACCCGAACGCGTACACCAACGCAGGCTTCAAACTGTCCCCAATGTCCTCCAAGCCCTCAAGACCATCTCTCTCACTTCCAAAGTCCTCGCCTTTATCACGTCACTATGGCATCACCCTTACGACCCTGAAATCCCAACTTACTATTACTTCACCTCCTGCGCCTCTGTTCTTGCTCTGTTTCTGTACTTCCCCACTGTCCATGATCAAACGCCGGAGAGCTTCAAGGACCGAAACGACGACGTTGTTGAGTATCCGGGATTGCCAGCGCTCCGAGGCTCCCAAATGCCGGATCCTATTCTCGACCGCAACGAGGCTGAATATGATTTCTTTCTCTATGTTGCTTCCTATCTTCCAAAAGCGAAGGGAATTATAACAAACACCTTCCAAGAACTTGAGCCTCGAGCAATCAAAGCCATAAAGGAAGGTGTTTGTGTTCCTAATCATCAAACCCCGCCGTTATATCACATCGGGCTGTTGATTTCCGACTCTGAAAATAGGTCGATCCAAGGCGGTTCGCCTATGCCAACCAACTGTTCCACGTTATGGCTGGATAAGCAGCCGAGCCGGAGTGTGGTGTACTTGTGCTTTGGAAGCCGAGGTACGTTTTCTGAAGAGCAGTTTAAGGAATTGGCTATAGGCTTGGAGAGAAGCAAGTTGAGATTTTTGTGGGTTGTGAAGAGTCAACTGGATTTGGAGGAAGTGAACAGTGTGGTGTTGGTGGAGGAAATGAAGCTGGCAATACCGATATTTGAGGTGCCGTCGAAGTCAAAACAAGGGTCGGTGAGTGCAGATGAGGTGGAGAAGAAGGTATTGAGGTTGATGGACATGGAGTCGGAGGAAGGGAAAAGTCTAAGAGAAAGGTGTCAAGCTGTCAAGGCAATGGGTTTGGCTGCTTGGAGAAATGGTGGCTCATCCTTCACTTCTTTTTCAGAGCTGATGGAATTAACCACTCTAGGAGACCAACTGCAGACCCATTTCCACATAAGGAAACCTTGGTTTTGTCACATTAATAGTTCATTTTGCCTCGTAGAAGTTCCCAACCCTAAACCCGGGGAGCCGGATGAAGTTACCGGGCTGAAAATATTTGCCGCCCCCAAGCAAACTGCGAAAGCAAAACCAGAGCGCAGCAAAACTAGAGCCAAAAGCGCAAGCATGAAGCGGTTGAGCTTGGACCAGGTGCTCAAGGACAACAACACTCGCGACCCCAACTCCATTTCTTCTCTCATCCTCACTCACAGGGCTCTCTCCGATGTTTCGTGCTTGGGCGAGCTCAAGAATCTGGAGCGGCTCGATCTCAGCGCCAACACGCTCACTTCGCTTGAGGGGTTGAAGTCATGCGCCAATCTGAAATGGCTATCTGTTTCTCAAAATAAACTGCAAAGCCTCAAGGGAATTGAAGGACTTTCTAAGCTCACTGTGTTAAATGCAGGCAACAATAAGCTTACAGTGATGGATGAAGTCAAGTCTATTGTGAGTTTGCGTGCATTAATTTTGAATGATAATGAGATTGCTTCGATTTGCAGACTTGAACAGATGAAAGAGTTGAACACTCTTGGTATGATCTCGAAGTCTAACGTATTGTTTCATGAATTACATCAATGGACTTGTACTTTCAATTGTAATCTGACTGTTGTGGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

634

Amino Acids

70.82

Weight (kDa)

7.9

Isoelectric Point (pI)

44.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006395)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g25671 FvH4_3g25680
prunus_persica	Prupe.6G136900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0046041 RchiOBHm_Chr5g0046051
rosa_laevigata	RLG00000034387 RLG00000034392 RLG00000034563 RLG00000034568
rosa_multiflora	Rmu_co8238891.1_g000001 Rmu_sc0001035.1_g000030 Rmu_sc0001035.1_g000034 Rmu_sc0001035.1_g000047 Rmu_sc0001035.1_g000051
rosa_roxburghii	Rroxscaffold_1G00035340
rosa_rugosa	Rorug05G0226000 Rorug05G0226100
rosa_samantha	Rh4BG171700 Rh5AG306600 Rh5AG306700 Rh5BG315300 Rh5BG315400 Rh5CG341500 Rh5CG341600 Rh5DG325400
rosa_wichuraiana	Rw5G028680 Rw5G028700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	635
AccB1I	GGYRCC	1 cut(s)	1018
AccB7I	CCANNNNNTGG	1 cut(s)	807
AccBSI	CCGCTC	1 cut(s)	1549
AccII	CGCG	2 cut(s)	273, 1464
AciI	CCGC	9 cut(s)	5, 205, 228, 568, 716, 774, 1353, 1423, 1549
AclWI	GGATC	5 cut(s)	55, 185, 548, 561, 760
AcuI	CTGAAG	1 cut(s)	894
AcyI	GRCGYC	1 cut(s)	252
AfaI	GTAC	5 cut(s)	276, 449, 842, 865, 1873
AfeI	AGCGCT	1 cut(s)	531
AfiI	CCNNNNNNNGG	5 cut(s)	550, 574, 807, 835, 1313
AflIII	ACRYGT	1 cut(s)	271
AgsI	TTSAA	8 cut(s)	293, 487, 1594, 1661, 1759, 1793, 1810, 1879
AhdI	GACNNNNNGTC	1 cut(s)	1093
AjiI	CACGTC	1 cut(s)	363
AjnI	CCWGG	2 cut(s)	43, 1437
AjuI	GAANNNNNNNTTGG	4 cut(s)	273, 305, 781, 813
AluBI	AGCT	8 cut(s)	483, 997, 1133, 1198, 1431, 1534, 1675, 1705
AluI	AGCT	8 cut(s)	483, 997, 1133, 1198, 1431, 1534, 1675, 1705
Alw21I	GWGCWC	2 cut(s)	1446, 1536
Alw26I	GTCTC	1 cut(s)	1215
AlwI	GGATC	5 cut(s)	55, 185, 548, 561, 760
Ama87I	CYCGRG	2 cut(s)	663, 1313
Aor51HI	AGCGCT	1 cut(s)	531
ApeKI	GCWGC	3 cut(s)	820, 1154, 1389
ArsI	GACNNNNNNTTYG	2 cut(s)	1025, 1057
AseI	ATTAAT	2 cut(s)	1272, 1751
AspLEI	GCGC	6 cut(s)	425, 532, 1389, 1412, 1565, 1604
AspS9I	GGNCC	2 cut(s)	490, 1435
AsuC2I	CCSGG	4 cut(s)	519, 1314, 1315, 1336
AsuHPI	GGTGA	4 cut(s)	33, 368, 406, 1057
AvaI	CYCGRG	2 cut(s)	663, 1313
AvaII	GGWCC	2 cut(s)	490, 1435
BamHI	GGATCC	1 cut(s)	553
BanI	GGYRCC	1 cut(s)	1018
BanII	GRGCYC	2 cut(s)	1507, 1536
BarI	GAAGNNNNNNTAC	2 cut(s)	847, 879
Bbv12I	GWGCWC	2 cut(s)	1446, 1536
BbvI	GCAGC	3 cut(s)	832, 1141, 1401
BccI	CCATC	5 cut(s)	177, 335, 1078, 1195, 1708
BceAI	ACGGC	2 cut(s)	703, 1006
BciT130I	CCWGG	2 cut(s)	45, 1439
BciVI	GTATCC	1 cut(s)	525
BclI	TGATCA	1 cut(s)	466
BcnI	CCSGG	4 cut(s)	519, 1314, 1315, 1336
BcoDI	GTCTC	1 cut(s)	1215
BfaI	CTAG	3 cut(s)	77, 1217, 1398
BfmI	CTRYAG	2 cut(s)	897, 1229
BfoI	RGCGCY	2 cut(s)	533, 1566
BfuI	GTATCC	1 cut(s)	525
BisI	GCNGC	5 cut(s)	821, 1155, 1353, 1390, 1550
BlsI	GCNGC	5 cut(s)	822, 1156, 1354, 1391, 1551
Bme1390I	CCNGG	6 cut(s)	45, 519, 1314, 1315, 1336, 1439
Bme18I	GGWCC	2 cut(s)	490, 1435
BmeRI	GACNNNNNGTC	1 cut(s)	1093
BmeT110I	CYCGRG	2 cut(s)	663, 1313
BmgBI	CACGTC	1 cut(s)	363
BmgT120I	GGNCC	2 cut(s)	490, 1435
BmiI	GGNNCC	4 cut(s)	541, 555, 1020, 1320
BmrFI	CCNGG	6 cut(s)	45, 519, 1314, 1315, 1336, 1439
BmsI	GCATC	3 cut(s)	47, 216, 382
BpmI	CTGGAG	1 cut(s)	1565
BpuEI	CTTGAG	6 cut(s)	305, 677, 1430, 1520, 1604, 1634
BpuMI	CCSGG	4 cut(s)	519, 1314, 1315, 1336
BsaBI	GATNNNNATC	1 cut(s)	195
BsaHI	GRCGYC	1 cut(s)	252
BsaI	GGTCTC	1 cut(s)	1215
BsaJI	CCNNGG	6 cut(s)	535, 769, 859, 1256, 1313, 1314
BsaXI	ACNNNNNCTCC	8 cut(s)	222, 252, 401, 431, 1153, 1183, 1457, 1487
Bsc4I	CCNNNNNNNGG	5 cut(s)	550, 574, 807, 835, 1313
Bse1I	ACTGG	1 cut(s)	954
Bse3DI	GCAATG	1 cut(s)	1149
Bse8I	GATNNNNATC	1 cut(s)	195
BseBI	CCWGG	2 cut(s)	45, 1439
BseDI	CCNNGG	6 cut(s)	535, 769, 859, 1256, 1313, 1314
BseGI	GGATG	4 cut(s)	1175, 1330, 1488, 1723
BseJI	GATNNNNATC	1 cut(s)	195
BseLI	CCNNNNNNNGG	5 cut(s)	550, 574, 807, 835, 1313
BseMI	GCAATG	1 cut(s)	1149
BseMII	CTCAG	1 cut(s)	1573
BseNI	ACTGG	1 cut(s)	954
BseXI	GCAGC	3 cut(s)	832, 1141, 1401
BseYI	CCCAGC	1 cut(s)	34
BsgI	GTGCAG	1 cut(s)	1071
Bsh1236I	CGCG	2 cut(s)	273, 1464
Bsh1285I	CGRYCG	1 cut(s)	568
BshNI	GGYRCC	1 cut(s)	1018
BsiEI	CGRYCG	1 cut(s)	568
BsiHKAI	GWGCWC	2 cut(s)	1446, 1536
BsiHKCI	CYCGRG	2 cut(s)	663, 1313
BsiSI	CCGG	7 cut(s)	476, 518, 551, 829, 1314, 1322, 1335
BslFI	GGGAC	1 cut(s)	284
BslI	CCNNNNNNNGG	5 cut(s)	550, 574, 807, 835, 1313
BsmAI	GTCTC	1 cut(s)	1215
BsmFI	GGGAC	1 cut(s)	284
Bso31I	GGTCTC	1 cut(s)	1215
BsoBI	CYCGRG	2 cut(s)	663, 1313
Bsp1286I	GDGCHC	3 cut(s)	1446, 1507, 1536
Bsp143I	GATC	8 cut(s)	47, 190, 196, 466, 553, 765, 1555, 1824
Bsp68I	TCGCGA	1 cut(s)	1464
BspACI	CCGC	9 cut(s)	5, 205, 228, 568, 716, 774, 1353, 1423, 1549
BspCNI	CTCAG	1 cut(s)	1572
BspFNI	CGCG	2 cut(s)	273, 1464
BspHI	TCATGA	1 cut(s)	1849
BspLI	GGNNCC	4 cut(s)	541, 555, 1020, 1320
BspMAI	CTGCAG	1 cut(s)	1233
BspPI	GGATC	5 cut(s)	55, 185, 548, 561, 760
BspQI	GCTCTTC	1 cut(s)	870
BspT107I	GGYRCC	1 cut(s)	1018
BspTNI	GGTCTC	1 cut(s)	1215
BsrBI	CCGCTC	1 cut(s)	1549
BsrDI	GCAATG	1 cut(s)	1149
BsrI	ACTGG	1 cut(s)	954
BssECI	CCNNGG	6 cut(s)	535, 769, 859, 1256, 1313, 1314
BssMI	GATC	8 cut(s)	47, 190, 196, 466, 553, 765, 1555, 1824
BssNI	GRCGYC	1 cut(s)	252
BssT1I	CCWWGG	2 cut(s)	769, 1256
Bst2UI	CCWGG	2 cut(s)	45, 1439
Bst4CI	ACNGT	8 cut(s)	121, 298, 460, 797, 971, 1681, 1711, 1894
Bst6I	CTCTTC	3 cut(s)	184, 870, 935
BstACI	GRCGYC	1 cut(s)	252
BstC8I	GCNNGC	8 cut(s)	205, 287, 528, 999, 1414, 1532, 1693, 1746
BstDEI	CTNAG	3 cut(s)	1115, 1559, 1671
BstF5I	GGATG	4 cut(s)	1175, 1330, 1488, 1723
BstFNI	CGCG	2 cut(s)	273, 1464
BstH2I	RGCGCY	2 cut(s)	533, 1566
BstHHI	GCGC	6 cut(s)	425, 532, 1389, 1412, 1565, 1604
BstKTI	GATC	8 cut(s)	50, 193, 199, 469, 556, 768, 1558, 1827
BstMAI	GTCTC	1 cut(s)	1215
BstMBI	GATC	8 cut(s)	47, 190, 196, 466, 553, 765, 1555, 1824
BstMCI	CGRYCG	1 cut(s)	568
BstMWI	GCNNNNNNNGC	6 cut(s)	674, 817, 855, 1139, 1409, 1579
BstNI	CCWGG	2 cut(s)	45, 1439
BstSCI	CCNGG	6 cut(s)	43, 517, 1312, 1313, 1334, 1437
BstSFI	CTRYAG	2 cut(s)	897, 1229
BstUI	CGCG	2 cut(s)	273, 1464
BstV1I	GCAGC	3 cut(s)	832, 1141, 1401
BstX2I	RGATCY	1 cut(s)	553
BstYI	RGATCY	1 cut(s)	553
BsuI	GTATCC	1 cut(s)	525
BtrI	CACGTC	1 cut(s)	363
BtsCI	GGATG	4 cut(s)	1175, 1330, 1488, 1723
BtsIMutI	CAGTG	4 cut(s)	456, 976, 1677, 1716
BtuMI	TCGCGA	1 cut(s)	1464
Cac8I	GCNNGC	8 cut(s)	205, 287, 528, 999, 1414, 1532, 1693, 1746
CciI	TCATGA	1 cut(s)	1849
CfoI	GCGC	6 cut(s)	425, 532, 1389, 1412, 1565, 1604
Cfr13I	GGNCC	2 cut(s)	490, 1435
Cfr9I	CCCGGG	1 cut(s)	1313
CseI	GACGC	1 cut(s)	260
CsiI	ACCWGGT	1 cut(s)	1437
Csp6I	GTAC	5 cut(s)	275, 448, 841, 864, 1872
CviAII	CATG	6 cut(s)	58, 464, 1090, 1417, 1599, 1850
CviQI	GTAC	5 cut(s)	275, 448, 841, 864, 1872
DdeI	CTNAG	3 cut(s)	1115, 1559, 1671
DpnI	GATC	8 cut(s)	49, 192, 198, 468, 555, 767, 1557, 1826
DpnII	GATC	8 cut(s)	47, 190, 196, 466, 553, 765, 1555, 1824
DriI	GACNNNNNGTC	1 cut(s)	1093
Eam1104I	CTCTTC	3 cut(s)	184, 870, 935
Eam1105I	GACNNNNNGTC	1 cut(s)	1093
EarI	CTCTTC	3 cut(s)	184, 870, 935
Ecl136II	GAGCTC	1 cut(s)	1534
Eco130I	CCWWGG	2 cut(s)	769, 1256
Eco24I	GRGCYC	2 cut(s)	1507, 1536
Eco31I	GGTCTC	1 cut(s)	1215
Eco47I	GGWCC	2 cut(s)	490, 1435
Eco47III	AGCGCT	1 cut(s)	531
Eco53kI	GAGCTC	1 cut(s)	1534
Eco57I	CTGAAG	1 cut(s)	894
Eco88I	CYCGRG	2 cut(s)	663, 1313
EcoICRI	GAGCTC	1 cut(s)	1534
EcoRII	CCWGG	2 cut(s)	43, 1437
EcoT14I	CCWWGG	2 cut(s)	769, 1256
EcoT38I	GRGCYC	2 cut(s)	1507, 1536
ErhI	CCWWGG	2 cut(s)	769, 1256
FaeI	CATG	6 cut(s)	61, 467, 1093, 1420, 1602, 1853
FalI	AAGNNNNNCTT	2 cut(s)	1240, 1272
FaqI	GGGAC	1 cut(s)	284
FatI	CATG	6 cut(s)	57, 463, 1089, 1416, 1598, 1849
FauI	CCCGC	3 cut(s)	212, 235, 723
FbaI	TGATCA	1 cut(s)	466
Fnu4HI	GCNGC	5 cut(s)	821, 1155, 1353, 1390, 1550
FokI	GGATG	4 cut(s)	1162, 1337, 1475, 1730
FriOI	GRGCYC	2 cut(s)	1507, 1536
Fsp4HI	GCNGC	5 cut(s)	821, 1155, 1353, 1390, 1550
FspBI	CTAG	3 cut(s)	77, 1217, 1398
GlaI	GCGC	6 cut(s)	424, 531, 1388, 1411, 1564, 1603
GluI	GCNGC	5 cut(s)	821, 1155, 1353, 1390, 1550
GsaI	CCCAGC	1 cut(s)	38
GsuI	CTGGAG	1 cut(s)	1565
HaeII	RGCGCY	2 cut(s)	533, 1566
HapII	CCGG	7 cut(s)	476, 518, 551, 829, 1314, 1322, 1335
HgaI	GACGC	1 cut(s)	260
HhaI	GCGC	6 cut(s)	425, 532, 1389, 1412, 1565, 1604
Hin1I	GRCGYC	1 cut(s)	252
Hin1II	CATG	6 cut(s)	61, 467, 1093, 1420, 1602, 1853
Hin6I	GCGC	6 cut(s)	423, 530, 1387, 1410, 1563, 1602
HinP1I	GCGC	6 cut(s)	423, 530, 1387, 1410, 1563, 1602
HincII	GTYRAC	1 cut(s)	947
HindII	GTYRAC	1 cut(s)	947
HindIII	AAGCTT	1 cut(s)	1703
HinfI	GANTC	4 cut(s)	749, 943, 1094, 1540
HpaII	CCGG	7 cut(s)	476, 518, 551, 829, 1314, 1322, 1335
HphI	GGTGA	4 cut(s)	33, 368, 406, 1057
Hpy166II	GTNNAC	4 cut(s)	277, 841, 947, 967
Hpy188III	TCNNGA	8 cut(s)	194, 322, 563, 1463, 1537, 1544, 1828, 1850
Hpy8I	GTNNAC	4 cut(s)	277, 841, 947, 967
Hpy99I	CGWCG	4 cut(s)	254, 503, 506, 1027
HpyAV	CCTTC	8 cut(s)	223, 619, 655, 680, 1063, 1097, 1189, 1655
HpyCH4III	ACNGT	8 cut(s)	121, 298, 460, 797, 971, 1681, 1711, 1894
HpyCH4IV	ACGT	5 cut(s)	362, 504, 803, 866, 1839
HpyCH4V	TGCA	6 cut(s)	1052, 1231, 1642, 1691, 1748, 1785
HpyF10VI	GCNNNNNNNGC	6 cut(s)	674, 817, 855, 1139, 1409, 1579
HpyF3I	CTNAG	3 cut(s)	1115, 1559, 1671
HpySE526I	ACGT	5 cut(s)	362, 504, 803, 866, 1839
Hsp92I	GRCGYC	1 cut(s)	252
Hsp92II	CATG	6 cut(s)	61, 467, 1093, 1420, 1602, 1853
HspAI	GCGC	6 cut(s)	423, 530, 1387, 1410, 1563, 1602
Ksp22I	TGATCA	1 cut(s)	466
Kzo9I	GATC	8 cut(s)	47, 190, 196, 466, 553, 765, 1555, 1824
LguI	GCTCTTC	1 cut(s)	870
LmnI	GCTCC	4 cut(s)	537, 545, 1318, 1546
Lsp1109I	GCAGC	3 cut(s)	832, 1141, 1401
LweI	GCATC	3 cut(s)	47, 216, 382
MabI	ACCWGGT	1 cut(s)	1437
MaeI	CTAG	3 cut(s)	77, 1217, 1398
MaeII	ACGT	5 cut(s)	362, 504, 803, 866, 1839
MaeIII	GTNAC	3 cut(s)	363, 1265, 1330
MalI	GATC	8 cut(s)	49, 192, 198, 468, 555, 767, 1557, 1826
MbiI	CCGCTC	1 cut(s)	1549
MboI	GATC	8 cut(s)	47, 190, 196, 466, 553, 765, 1555, 1824
MboII	GAAGA	9 cut(s)	129, 164, 171, 208, 605, 887, 952, 1078, 1473
MfeI	CAATTG	1 cut(s)	1879
MflI	RGATCY	1 cut(s)	553
MhlI	GDGCHC	3 cut(s)	1446, 1507, 1536
MluCI	AATT	7 cut(s)	630, 890, 1205, 1656, 1752, 1853, 1879
MluI	ACGCGT	1 cut(s)	271
MlyI	GAGTC	3 cut(s)	743, 952, 1103
MmeI	TCCRAC	2 cut(s)	771, 1077
MseI	TTAA	5 cut(s)	885, 1208, 1272, 1685, 1751
MspI	CCGG	7 cut(s)	476, 518, 551, 829, 1314, 1322, 1335
MspR9I	CCNGG	6 cut(s)	45, 519, 1314, 1315, 1336, 1439
MunI	CAATTG	1 cut(s)	1879
MvaI	CCWGG	2 cut(s)	45, 1439
MvnI	CGCG	2 cut(s)	273, 1464
MwoI	GCNNNNNNNGC	6 cut(s)	674, 817, 855, 1139, 1409, 1579
NciI	CCSGG	4 cut(s)	519, 1314, 1315, 1336
NdeII	GATC	8 cut(s)	47, 190, 196, 466, 553, 765, 1555, 1824
NlaIII	CATG	6 cut(s)	61, 467, 1093, 1420, 1602, 1853
NlaIV	GGNNCC	4 cut(s)	541, 555, 1020, 1320
NmeAIII	GCCGAG	2 cut(s)	849, 884
NmuCI	GTSAC	2 cut(s)	363, 1265
NruI	TCGCGA	1 cut(s)	1464
PaeR7I	CTCGAG	1 cut(s)	663
PagI	TCATGA	1 cut(s)	1849
PciSI	GCTCTTC	1 cut(s)	870
PcsI	WCGNNNNNNNCGW	1 cut(s)	570
PfeI	GAWTC	1 cut(s)	1540
PflMI	CCANNNNNTGG	1 cut(s)	807
PfoI	TCCNGGA	1 cut(s)	517
PkrI	GCNGC	5 cut(s)	822, 1156, 1354, 1391, 1551
PleI	GAGTC	3 cut(s)	743, 951, 1102
PpsI	GAGTC	3 cut(s)	743, 951, 1102
PshBI	ATTAAT	2 cut(s)	1272, 1751
PsiI	TTATAA	1 cut(s)	635
Psp124BI	GAGCTC	1 cut(s)	1536
Psp6I	CCWGG	2 cut(s)	43, 1437
PspFI	CCCAGC	1 cut(s)	34
PspGI	CCWGG	2 cut(s)	43, 1437
PspN4I	GGNNCC	4 cut(s)	541, 555, 1020, 1320
PspPI	GGNCC	2 cut(s)	490, 1435
PspXI	VCTCGAGB	1 cut(s)	663
PstI	CTGCAG	1 cut(s)	1233
PsuI	RGATCY	1 cut(s)	553
RruI	TCGCGA	1 cut(s)	1464
RsaI	GTAC	5 cut(s)	276, 449, 842, 865, 1873
RsaNI	GTAC	5 cut(s)	275, 448, 841, 864, 1872
SacI	GAGCTC	1 cut(s)	1536
SapI	GCTCTTC	1 cut(s)	870
SaqAI	TTAA	5 cut(s)	885, 1208, 1272, 1685, 1751
SatI	GCNGC	5 cut(s)	821, 1155, 1353, 1390, 1550
Sau3AI	GATC	8 cut(s)	47, 190, 196, 466, 553, 765, 1555, 1824
Sau96I	GGNCC	2 cut(s)	490, 1435
SchI	GAGTC	3 cut(s)	743, 952, 1103
ScrFI	CCNGG	6 cut(s)	45, 519, 1314, 1315, 1336, 1439
SduI	GDGCHC	3 cut(s)	1446, 1507, 1536
SexAI	ACCWGGT	1 cut(s)	1437
SfaNI	GCATC	3 cut(s)	47, 216, 382
SfcI	CTRYAG	2 cut(s)	897, 1229
Sfr274I	CTCGAG	1 cut(s)	663
SinI	GGWCC	2 cut(s)	490, 1435
SlaI	CTCGAG	1 cut(s)	663
SmaI	CCCGGG	1 cut(s)	1315
SmlI	CTYRAG	7 cut(s)	320, 656, 663, 1445, 1535, 1583, 1649
SmoI	CTYRAG	7 cut(s)	320, 656, 663, 1445, 1535, 1583, 1649
Sse9I	AATT	7 cut(s)	630, 890, 1205, 1656, 1752, 1853, 1879
SsiI	CCGC	9 cut(s)	5, 205, 228, 568, 716, 774, 1353, 1423, 1549
SspI	AATATT	1 cut(s)	1347
SspMI	CTAG	3 cut(s)	77, 1217, 1398
SstI	GAGCTC	1 cut(s)	1536
StyD4I	CCNGG	6 cut(s)	43, 517, 1312, 1313, 1334, 1437
StyI	CCWWGG	2 cut(s)	769, 1256
TaaI	ACNGT	8 cut(s)	121, 298, 460, 797, 971, 1681, 1711, 1894
TaiI	ACGT	5 cut(s)	365, 507, 806, 869, 1842
TaqI	TCGA	9 cut(s)	72, 129, 564, 664, 764, 1025, 1554, 1778, 1829
TaqII	GACCGA	1 cut(s)	507
TasI	AATT	7 cut(s)	630, 890, 1205, 1656, 1752, 1853, 1879
TatI	WGTACW	3 cut(s)	447, 840, 1871
TauI	GCSGC	2 cut(s)	1355, 1552
TfiI	GAWTC	1 cut(s)	1540
Tru1I	TTAA	5 cut(s)	885, 1208, 1272, 1685, 1751
Tru9I	TTAA	5 cut(s)	885, 1208, 1272, 1685, 1751
TscAI	CASTG	4 cut(s)	463, 976, 1684, 1716
TseFI	GTSAC	2 cut(s)	363, 1265
TseI	GCWGC	3 cut(s)	820, 1154, 1389
Tsp45I	GTSAC	2 cut(s)	363, 1265
TspDTI	ATGAA	9 cut(s)	26, 1007, 1269, 1341, 1433, 1734, 1814, 1838, 1866
TspMI	CCCGGG	1 cut(s)	1313
TspRI	CASTG	4 cut(s)	463, 976, 1684, 1716
Van91I	CCANNNNNTGG	1 cut(s)	807
VpaK11BI	GGWCC	2 cut(s)	490, 1435
VspI	ATTAAT	2 cut(s)	1272, 1751
XcmI	CCANNNNNNNNNTGG	1 cut(s)	808
XhoI	CTCGAG	1 cut(s)	663
XmaI	CCCGGG	1 cut(s)	1313
XspI	CTAG	3 cut(s)	77, 1217, 1398

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.