Rh5CG341500

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0006395
Physical Location & Seq
Reverse (-)
39133180 .. 39135591
2412 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG341500.1

Sequence Viewer

Length: 1521 bp
ATGGCGGAAATGAAACAAAGCATAGTGTTATACCCAGCATCACCTGGATCGCACCACATGGTTTCCATAGTCGAACTAGGAAAACTCATCTCCCAACGCCACCCCAACTTGTCCATAACAGTCTTGCTCGACACATCTTCCCCTCTCGCCAAATCCTCATACATCAACCATCTTCTCTCTTCTAACTCTGATCCCGATCAAGCCCGCATCTCATTCTTCACTCTCCCCGCACTCAACCTCCCCCAACCCGACCCCCAAACCAGACCCGAACGCGTACACCAACTCAGGCTTCAAACTGTCCCCAATGTCCTCCAAGCCCTCAAGACCATCTCTCTCACTTCCAAAGTCCTCGCCTTTATCACGTCACTATGGCATCACCCTTACGACCCTGAAATCCCAACTTACTATTACTTCACCTCCTGCGCCTCTGTTCTTGCTCTGTTTCTGTACTTCCCCACTGTCCATGATCAAACGCCGGAGAGCTTCAAGGACCGAAACGACGACGTTGTTGAGTATCCGGGATTGCCAGCGCTCCGAGGCTCCCAAATGCCGAATCCTATTCTCGACCGCAACGAGGCTGAATATGATTTCTTTCTCTATTTTGCTTCCTGTCTTCCAAAAGCGAAGGGAATTATAACAAACACCTTCCAAGAACTTGAGCCTCGAGCAATCAAGGCCATAAAGGAAGGTGTTTGTGTTCCTAATCATCAAACCCCGCCGTTATATCACATCGGGCCGTTGATTTCTGACTCTGAAAATAGGTCGATCCAAGGCGGTTCGCCTATGCCAACTAACTGTTCCACGTTATGGCTGGATAAGCAGCCGAGCCGGAGTGTGGTGTACTTGTGCTTTGGAAGCAGAGGTACGTTTTCTGAAGAGCAGTTTAAGGAATTGGCTATAGGCTTGGAGAGAAGCAAATTGAGATTTTTGTGGGTTGTGAAGAGTCAACTGGATTTGGAGGTACTAATGCCACAAGGGTTCTTGGAGAGGACCAAAGATAGAGGTCTTGTAGTCACTTCTTGGGCGCCACAGGTTGCTGTTCTAAACCATGAATCTGTGGGTGGGTTTGTGAATCACTGTGGGTGGAACTCAATCACTGAAGCAGTGACTTATGGAGTGCCTATGGTGGCTTGGCCTTTGTATGCTGAGCAGGAAGTGAACAGTGTGGTGTTGGTGGAGGAAATGAAGCTGGCAATACCTATATTTGAGGTGCCGTCGAAGTCAAAACAAGGGTCGGTGAGTGCAGATGAGGTGGAGAAGAAGGTATTGAGGTTGATGGACATGGAGTCGGAGGAAGGGAAAAGTCTAAGAGAAAGGTGTCAAGCTGTCAAGGCAATGGGTTTGGCTGCTTGGAGAAATGGTGGCTCATCCTTCACTTCTTTTTCAGAGCTAATGGAATTAACCACTCTAGGAGACCAACTGCAGACCCATTTCCACATAAGCAAACCTTGGTTTGTCACATTAATAGTTCATTTTGCCTCGTTGAAGGTGCATCGCATGCTATACCACAATAAAGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

506

Amino Acids

56.84

Weight (kDa)

6.39

Isoelectric Point (pI)

47.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 273 - 391 1.9e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 635
AccB1I GGYRCC 2 cut(s) 1024, 1210
AccB7I CCANNNNNTGG 1 cut(s) 807
AccII CGCG 1 cut(s) 273
AciI CCGC 6 cut(s) 5, 205, 228, 568, 716, 774
AclWI GGATC 3 cut(s) 55, 185, 760
AcuI CTGAAG 2 cut(s) 894, 1119
AcyI GRCGYC 1 cut(s) 1025
AfaI GTAC 5 cut(s) 276, 449, 842, 865, 963
AfeI AGCGCT 1 cut(s) 531
AfiI CCNNNNNNNGG 3 cut(s) 574, 807, 835
AflIII ACRYGT 1 cut(s) 271
AgsI TTSAA 3 cut(s) 293, 487, 1486
AhdI GACNNNNNGTC 1 cut(s) 1285
AjiI CACGTC 1 cut(s) 363
AjnI CCWGG 1 cut(s) 43
AjuI GAANNNNNNNTTGG 4 cut(s) 273, 305, 781, 813
AluBI AGCT 4 cut(s) 483, 1189, 1325, 1390
AluI AGCT 4 cut(s) 483, 1189, 1325, 1390
Alw26I GTCTC 1 cut(s) 1407
AlwI GGATC 3 cut(s) 55, 185, 760
Ama87I CYCGRG 1 cut(s) 663
Aor51HI AGCGCT 1 cut(s) 531
AoxI GGCC 3 cut(s) 675, 734, 1133
ApeKI GCWGC 2 cut(s) 820, 1346
ArsI GACNNNNNNTTYG 2 cut(s) 1217, 1249
AseI ATTAAT 1 cut(s) 1463
AspLEI GCGC 3 cut(s) 425, 532, 1027
AspS9I GGNCC 3 cut(s) 490, 734, 990
AsuC2I CCSGG 1 cut(s) 519
AsuHPI GGTGA 4 cut(s) 33, 368, 406, 1249
AvaI CYCGRG 1 cut(s) 663
AvaII GGWCC 2 cut(s) 490, 990
BanI GGYRCC 2 cut(s) 1024, 1210
BarI GAAGNNNNNNTAC 2 cut(s) 847, 879
BbsI GAAGAC 1 cut(s) 605
BbvI GCAGC 2 cut(s) 832, 1333
BccI CCATC 3 cut(s) 177, 335, 1270
BceAI ACGGC 3 cut(s) 703, 721, 1198
BciT130I CCWGG 1 cut(s) 45
BciVI GTATCC 1 cut(s) 525
BclI TGATCA 1 cut(s) 466
BcnI CCSGG 1 cut(s) 519
BcoDI GTCTC 1 cut(s) 1407
BfaI CTAG 2 cut(s) 77, 1409
BfmI CTRYAG 2 cut(s) 897, 1421
BfoI RGCGCY 2 cut(s) 533, 1028
BfuI GTATCC 1 cut(s) 525
BisI GCNGC 2 cut(s) 821, 1347
BlpI GCTNAGC 1 cut(s) 1146
BlsI GCNGC 2 cut(s) 822, 1348
Bme1390I CCNGG 2 cut(s) 45, 519
Bme18I GGWCC 2 cut(s) 490, 990
BmeRI GACNNNNNGTC 1 cut(s) 1285
BmeT110I CYCGRG 1 cut(s) 663
BmgBI CACGTC 1 cut(s) 363
BmgT120I GGNCC 3 cut(s) 490, 734, 990
BmiI GGNNCC 3 cut(s) 541, 1026, 1212
BmrFI CCNGG 2 cut(s) 45, 519
BmsI GCATC 4 cut(s) 47, 216, 382, 1501
BpiI GAAGAC 1 cut(s) 605
Bpu1102I GCTNAGC 1 cut(s) 1146
BpuEI CTTGAG 2 cut(s) 305, 677
BpuMI CCSGG 1 cut(s) 519
BsaBI GATNNNNATC 1 cut(s) 195
BsaHI GRCGYC 1 cut(s) 1025
BsaI GGTCTC 1 cut(s) 1407
BsaJI CCNNGG 3 cut(s) 535, 769, 1448
BsaXI ACNNNNNCTCC 6 cut(s) 222, 252, 401, 431, 1345, 1375
Bsc4I CCNNNNNNNGG 3 cut(s) 574, 807, 835
Bse1I ACTGG 1 cut(s) 954
Bse3DI GCAATG 1 cut(s) 1341
Bse8I GATNNNNATC 1 cut(s) 195
BseBI CCWGG 1 cut(s) 45
BseDI CCNNGG 3 cut(s) 535, 769, 1448
BseGI GGATG 1 cut(s) 1367
BseJI GATNNNNATC 1 cut(s) 195
BseLI CCNNNNNNNGG 3 cut(s) 574, 807, 835
BseMI GCAATG 1 cut(s) 1341
BseMII CTCAG 2 cut(s) 298, 1137
BseNI ACTGG 1 cut(s) 954
BseXI GCAGC 2 cut(s) 832, 1333
BseYI CCCAGC 1 cut(s) 34
BsgI GTGCAG 1 cut(s) 1263
Bsh1236I CGCG 1 cut(s) 273
Bsh1285I CGRYCG 1 cut(s) 568
BshFI GGCC 3 cut(s) 677, 736, 1135
BshNI GGYRCC 2 cut(s) 1024, 1210
BsiEI CGRYCG 1 cut(s) 568
BsiHKCI CYCGRG 1 cut(s) 663
BsiSI CCGG 3 cut(s) 476, 518, 829
BslFI GGGAC 1 cut(s) 284
BslI CCNNNNNNNGG 3 cut(s) 574, 807, 835
BsmAI GTCTC 1 cut(s) 1407
BsmFI GGGAC 1 cut(s) 284
BsnI GGCC 3 cut(s) 677, 736, 1135
Bso31I GGTCTC 1 cut(s) 1407
BsoBI CYCGRG 1 cut(s) 663
Bsp143I GATC 5 cut(s) 47, 190, 196, 466, 765
Bsp1720I GCTNAGC 1 cut(s) 1146
BspACI CCGC 6 cut(s) 5, 205, 228, 568, 716, 774
BspANI GGCC 3 cut(s) 677, 736, 1135
BspCNI CTCAG 2 cut(s) 297, 1138
BspFNI CGCG 1 cut(s) 273
BspLI GGNNCC 3 cut(s) 541, 1026, 1212
BspMAI CTGCAG 1 cut(s) 1425
BspPI GGATC 3 cut(s) 55, 185, 760
BspQI GCTCTTC 1 cut(s) 870
BspT107I GGYRCC 2 cut(s) 1024, 1210
BspTNI GGTCTC 1 cut(s) 1407
BsrDI GCAATG 1 cut(s) 1341
BsrI ACTGG 1 cut(s) 954
BssECI CCNNGG 3 cut(s) 535, 769, 1448
BssMI GATC 5 cut(s) 47, 190, 196, 466, 765
BssNI GRCGYC 1 cut(s) 1025
BssT1I CCWWGG 2 cut(s) 769, 1448
Bst2UI CCWGG 1 cut(s) 45
Bst4CI ACNGT 6 cut(s) 121, 298, 460, 797, 1079, 1163
Bst6I CTCTTC 3 cut(s) 184, 870, 935
BstACI GRCGYC 1 cut(s) 1025
BstAPI GCANNNNNTGC 1 cut(s) 1498
BstC8I GCNNGC 4 cut(s) 205, 528, 1191, 1499
BstDEI CTNAG 3 cut(s) 284, 1146, 1307
BstF5I GGATG 1 cut(s) 1367
BstFNI CGCG 1 cut(s) 273
BstH2I RGCGCY 2 cut(s) 533, 1028
BstHHI GCGC 3 cut(s) 425, 532, 1027
BstKTI GATC 5 cut(s) 50, 193, 199, 469, 768
BstMAI GTCTC 1 cut(s) 1407
BstMBI GATC 5 cut(s) 47, 190, 196, 466, 765
BstMCI CGRYCG 1 cut(s) 568
BstMWI GCNNNNNNNGC 5 cut(s) 674, 817, 855, 1331, 1498
BstNI CCWGG 1 cut(s) 45
BstNSI RCATGY 1 cut(s) 1501
BstSCI CCNGG 2 cut(s) 43, 517
BstSFI CTRYAG 2 cut(s) 897, 1421
BstUI CGCG 1 cut(s) 273
BstV1I GCAGC 2 cut(s) 832, 1333
BstV2I GAAGAC 1 cut(s) 605
BsuI GTATCC 1 cut(s) 525
BsuRI GGCC 3 cut(s) 677, 736, 1135
BtgZI GCGATG 1 cut(s) 1478
BtrI CACGTC 1 cut(s) 363
BtsCI GGATG 1 cut(s) 1367
BtsI GCAGTG 1 cut(s) 1110
BtsIMutI CAGTG 5 cut(s) 456, 1075, 1095, 1110, 1168
Cac8I GCNNGC 4 cut(s) 205, 528, 1191, 1499
CfoI GCGC 3 cut(s) 425, 532, 1027
Cfr13I GGNCC 3 cut(s) 490, 734, 990
Csp6I GTAC 5 cut(s) 275, 448, 841, 864, 962
CviAII CATG 5 cut(s) 58, 464, 1049, 1282, 1498
CviQI GTAC 5 cut(s) 275, 448, 841, 864, 962
DdeI CTNAG 3 cut(s) 284, 1146, 1307
DinI GGCGCC 1 cut(s) 1026
DpnI GATC 5 cut(s) 49, 192, 198, 468, 767
DpnII GATC 5 cut(s) 47, 190, 196, 466, 765
DriI GACNNNNNGTC 1 cut(s) 1285
Eam1104I CTCTTC 3 cut(s) 184, 870, 935
Eam1105I GACNNNNNGTC 1 cut(s) 1285
EarI CTCTTC 3 cut(s) 184, 870, 935
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 2 cut(s) 769, 1448
Eco31I GGTCTC 1 cut(s) 1407
Eco47I GGWCC 2 cut(s) 490, 990
Eco47III AGCGCT 1 cut(s) 531
Eco57I CTGAAG 2 cut(s) 894, 1119
Eco88I CYCGRG 1 cut(s) 663
EcoRII CCWGG 1 cut(s) 43
EcoT14I CCWWGG 2 cut(s) 769, 1448
EgeI GGCGCC 1 cut(s) 1026
EheI GGCGCC 1 cut(s) 1026
ErhI CCWWGG 2 cut(s) 769, 1448
FaeI CATG 5 cut(s) 61, 467, 1052, 1285, 1501
FalI AAGNNNNNCTT 2 cut(s) 1432, 1464
FaqI GGGAC 1 cut(s) 284
FatI CATG 5 cut(s) 57, 463, 1048, 1281, 1497
FauI CCCGC 3 cut(s) 212, 235, 723
FbaI TGATCA 1 cut(s) 466
Fnu4HI GCNGC 2 cut(s) 821, 1347
FokI GGATG 1 cut(s) 1354
Fsp4HI GCNGC 2 cut(s) 821, 1347
FspBI CTAG 2 cut(s) 77, 1409
GlaI GCGC 3 cut(s) 424, 531, 1026
GluI GCNGC 2 cut(s) 821, 1347
GsaI CCCAGC 1 cut(s) 38
HaeII RGCGCY 2 cut(s) 533, 1028
HaeIII GGCC 3 cut(s) 677, 736, 1135
HapII CCGG 3 cut(s) 476, 518, 829
HhaI GCGC 3 cut(s) 425, 532, 1027
Hin1I GRCGYC 1 cut(s) 1025
Hin1II CATG 5 cut(s) 61, 467, 1052, 1285, 1501
Hin6I GCGC 3 cut(s) 423, 530, 1025
HinP1I GCGC 3 cut(s) 423, 530, 1025
HincII GTYRAC 1 cut(s) 947
HindII GTYRAC 1 cut(s) 947
HinfI GANTC 6 cut(s) 553, 749, 943, 1052, 1072, 1286
HpaII CCGG 3 cut(s) 476, 518, 829
HphI GGTGA 4 cut(s) 33, 368, 406, 1249
Hpy166II GTNNAC 4 cut(s) 277, 841, 947, 1159
Hpy188I TCNGA 7 cut(s) 190, 536, 748, 754, 874, 1291, 1387
Hpy188III TCNNGA 3 cut(s) 194, 322, 563
Hpy8I GTNNAC 4 cut(s) 277, 841, 947, 1159
Hpy99I CGWCG 3 cut(s) 503, 506, 1219
HpyAV CCTTC 7 cut(s) 619, 655, 680, 1255, 1289, 1381, 1480
HpyCH4III ACNGT 6 cut(s) 121, 298, 460, 797, 1079, 1163
HpyCH4IV ACGT 4 cut(s) 362, 504, 803, 866
HpyCH4V TGCA 3 cut(s) 1244, 1423, 1492
HpyF10VI GCNNNNNNNGC 5 cut(s) 674, 817, 855, 1331, 1498
HpyF3I CTNAG 3 cut(s) 284, 1146, 1307
HpySE526I ACGT 4 cut(s) 362, 504, 803, 866
Hsp92I GRCGYC 1 cut(s) 1025
Hsp92II CATG 5 cut(s) 61, 467, 1052, 1285, 1501
HspAI GCGC 3 cut(s) 423, 530, 1025
KasI GGCGCC 1 cut(s) 1024
Ksp22I TGATCA 1 cut(s) 466
Kzo9I GATC 5 cut(s) 47, 190, 196, 466, 765
LguI GCTCTTC 1 cut(s) 870
LmnI GCTCC 2 cut(s) 537, 545
Lsp1109I GCAGC 2 cut(s) 832, 1333
LweI GCATC 4 cut(s) 47, 216, 382, 1501
MaeI CTAG 2 cut(s) 77, 1409
MaeII ACGT 4 cut(s) 362, 504, 803, 866
MaeIII GTNAC 4 cut(s) 363, 1012, 1105, 1456
MalI GATC 5 cut(s) 49, 192, 198, 468, 767
MboI GATC 5 cut(s) 47, 190, 196, 466, 765
MboII GAAGA 8 cut(s) 129, 164, 171, 208, 605, 887, 952, 1270
MluCI AATT 4 cut(s) 630, 890, 917, 1397
MluI ACGCGT 1 cut(s) 271
Mly113I GGCGCC 1 cut(s) 1025
MlyI GAGTC 3 cut(s) 743, 952, 1295
MmeI TCCRAC 1 cut(s) 1269
MseI TTAA 3 cut(s) 885, 1400, 1463
MspI CCGG 3 cut(s) 476, 518, 829
MspR9I CCNGG 2 cut(s) 45, 519
MvaI CCWGG 1 cut(s) 45
MvnI CGCG 1 cut(s) 273
MwoI GCNNNNNNNGC 5 cut(s) 674, 817, 855, 1331, 1498
NarI GGCGCC 1 cut(s) 1025
NciI CCSGG 1 cut(s) 519
NdeII GATC 5 cut(s) 47, 190, 196, 466, 765
NlaIII CATG 5 cut(s) 61, 467, 1052, 1285, 1501
NlaIV GGNNCC 3 cut(s) 541, 1026, 1212
NmeAIII GCCGAG 1 cut(s) 849
NmuCI GTSAC 4 cut(s) 363, 1012, 1105, 1456
NspI RCATGY 1 cut(s) 1501
PaeI GCATGC 1 cut(s) 1501
PaeR7I CTCGAG 1 cut(s) 663
PciSI GCTCTTC 1 cut(s) 870
PcsI WCGNNNNNNNCGW 1 cut(s) 570
PfeI GAWTC 3 cut(s) 553, 1052, 1072
PflMI CCANNNNNTGG 1 cut(s) 807
PfoI TCCNGGA 1 cut(s) 517
PkrI GCNGC 2 cut(s) 822, 1348
PleI GAGTC 3 cut(s) 743, 951, 1294
PluTI GGCGCC 1 cut(s) 1028
PpsI GAGTC 3 cut(s) 743, 951, 1294
PshBI ATTAAT 1 cut(s) 1463
PsiI TTATAA 1 cut(s) 635
Psp6I CCWGG 1 cut(s) 43
PspFI CCCAGC 1 cut(s) 34
PspGI CCWGG 1 cut(s) 43
PspN4I GGNNCC 3 cut(s) 541, 1026, 1212
PspPI GGNCC 3 cut(s) 490, 734, 990
PspXI VCTCGAGB 1 cut(s) 663
PstI CTGCAG 1 cut(s) 1425
RsaI GTAC 5 cut(s) 276, 449, 842, 865, 963
RsaNI GTAC 5 cut(s) 275, 448, 841, 864, 962
SapI GCTCTTC 1 cut(s) 870
SaqAI TTAA 3 cut(s) 885, 1400, 1463
SatI GCNGC 2 cut(s) 821, 1347
Sau3AI GATC 5 cut(s) 47, 190, 196, 466, 765
Sau96I GGNCC 3 cut(s) 490, 734, 990
SchI GAGTC 3 cut(s) 743, 952, 1295
ScrFI CCNGG 2 cut(s) 45, 519
SfaNI GCATC 4 cut(s) 47, 216, 382, 1501
SfcI CTRYAG 2 cut(s) 897, 1421
SfoI GGCGCC 1 cut(s) 1026
Sfr274I CTCGAG 1 cut(s) 663
SinI GGWCC 2 cut(s) 490, 990
SlaI CTCGAG 1 cut(s) 663
SmlI CTYRAG 3 cut(s) 320, 656, 663
SmoI CTYRAG 3 cut(s) 320, 656, 663
SphI GCATGC 1 cut(s) 1501
Sse9I AATT 4 cut(s) 630, 890, 917, 1397
SsiI CCGC 6 cut(s) 5, 205, 228, 568, 716, 774
SspDI GGCGCC 1 cut(s) 1024
SspMI CTAG 2 cut(s) 77, 1409
StyD4I CCNGG 2 cut(s) 43, 517
StyI CCWWGG 2 cut(s) 769, 1448
TaaI ACNGT 6 cut(s) 121, 298, 460, 797, 1079, 1163
TaiI ACGT 4 cut(s) 365, 507, 806, 869
TaqI TCGA 6 cut(s) 72, 129, 564, 664, 764, 1217
TaqII GACCGA 1 cut(s) 507
TasI AATT 4 cut(s) 630, 890, 917, 1397
TatI WGTACW 2 cut(s) 447, 840
TfiI GAWTC 3 cut(s) 553, 1052, 1072
Tru1I TTAA 3 cut(s) 885, 1400, 1463
Tru9I TTAA 3 cut(s) 885, 1400, 1463
TscAI CASTG 5 cut(s) 463, 1082, 1102, 1110, 1168
TseFI GTSAC 4 cut(s) 363, 1012, 1105, 1456
TseI GCWGC 2 cut(s) 820, 1346
Tsp45I GTSAC 4 cut(s) 363, 1012, 1105, 1456
TspDTI ATGAA 4 cut(s) 26, 1065, 1199, 1460
TspRI CASTG 5 cut(s) 463, 1082, 1102, 1110, 1168
Van91I CCANNNNNTGG 1 cut(s) 807
VpaK11BI GGWCC 2 cut(s) 490, 990
VspI ATTAAT 1 cut(s) 1463
XceI RCATGY 1 cut(s) 1501
XcmI CCANNNNNNNNNTGG 1 cut(s) 808
XhoI CTCGAG 1 cut(s) 663
XspI CTAG 2 cut(s) 77, 1409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.