RLG00000034568

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0006395
Physical Location & Seq
Reverse (-)
45088571 .. 45091147
2577 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034568

Sequence Viewer

Length: 1437 bp
ATGGCGGAAATGAAACAAAGCATAGTGCTATATCCAGCATCACCTGGATCGCACTACTTGGGTTCCACAGTCGAACTAGGAAAGCTCATCTCCCAACGCCACCCCAACTTCTCCATCACAGTCTTGGTCGACACATCTTCCCCTCGAGCTCTAGCCAATTCCTCATACATCAACCATCTTCTCTCTTCTGATCAAACCTCCATCTCCTTCTTCACTCTCCCCTCCCTCAATCTCCCCCACCCCGACGCCCAAACCAAACTCGAATACTTCTTAACTGTCCCCAATGTCGTCCAAGCCCTCAAGACAATCTCTCTCACTTCCAAAGTCCTCGCCTTCATCACATCAGCAGTGCAACAGTACCCTTGCGACCCTGAAATCCCAACTTACTATTACTTCCCCTCTTGCGCCTCTGTTCTTGCTCTGTTTCTGTACCTCCCCACTTTCCATGATCAAACGCCGGAGAGCTTCAAGGACCTAAATGACGACGTTGTGGAGTTTCCGGGATTGCCAGCGCTCCGAGGCTCGCAAATGCCGGTTTCTATTCTCGACCGCAACGAGGCTGCATATGATCACTATTTCCATATTGCTTCCTGTCTTCCAAAAGCGAAGGGAATTATAATAAACACCTTCCAAGAACTTGAGCCTCGAGCAATCAAGGCAATAAAGGAAGGTGTTTGTGTTCCTAATCATCGAACCCCGCCGTTATATCACATCGGACCGTTCATTTCCGACTCTGAAAATAGGTCGATCCAAGGCGGTTCGCCCATGCCAACTAACTGTTCCACGTTATGGCTGGATGAGCAGCCGAGCCGGAGTGTGGTGTTCTTGTGCTTTGGAAGCAGAGGTACGTTTTTTGAAGAGCAGTTTAAGGAATTGGCTATAGGCTTGGAGAGAAGCAAGTTGAGATTTTTGTGGGTTGTGTGGAGTCAGCTGGATTTGGAGGTACTGCTACCACAAGGGTTCTTGGAAAGGACCAAAGATAGAGGTCTTGTAGTCACGTCTTGGGCGCCACAGCTTGCTATTCTAAGTCATGGATCTGTGGGTGGGTTTGTGACTCACTGTGGGTGGAACTCGATCACTGAAGCAGTGACTTATGGAGTGCCTATGGTGGCTTGGCCTTTGTATTCCGAGCAGGAAGTGAACAGTGTGGTGTTGGTGGAGGAAATGAAGCTGGCAATACCGATATTTGAGGTGCTGTCGAAGTCAAAACAAGGGTTGGTGAGTGCAAATGAGGTGGAGAAGAAGGTGTTGCGGTTGATGGACATGGAGTCGGAAGAAGGGAAACGTCTAAGAGAAAGGTGTCAAGCTGTCAAGGCAATGGGTTTGGCTGCTTGGAGAAATGGTGGCTCATCCTTCACTTCTTTTTCAGAGCTGCCTTTGTGTGGAATATGTGTCTTCTATGATGTAGTTGCATCTGCTGTTAGAGGTGGCTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

479

Amino Acids

53.0

Weight (kDa)

5.82

Isoelectric Point (pI)

48.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 269 - 409 1.4e-19 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 617
AccB1I GGYRCC 1 cut(s) 1006
AccB7I CCANNNNNTGG 1 cut(s) 789
AccI GTMKAC 1 cut(s) 129
AciI CCGC 5 cut(s) 5, 550, 698, 756, 1252
AclWI GGATC 3 cut(s) 55, 742, 1042
AcuI CTGAAG 1 cut(s) 1101
AcyI GRCGYC 2 cut(s) 246, 1007
AfaI GTAC 4 cut(s) 359, 431, 847, 945
AfeI AGCGCT 1 cut(s) 513
AfiI CCNNNNNNNGG 4 cut(s) 556, 789, 817, 1382
AgsI TTSAA 2 cut(s) 469, 857
AhdI GACNNNNNGTC 1 cut(s) 1267
AjiI CACGTC 1 cut(s) 999
AjnI CCWGG 1 cut(s) 43
AjuI GAANNNNNNNTTGG 2 cut(s) 763, 795
AluBI AGCT 8 cut(s) 85, 149, 465, 931, 1015, 1171, 1307, 1372
AluI AGCT 8 cut(s) 85, 149, 465, 931, 1015, 1171, 1307, 1372
Alw21I GWGCWC 1 cut(s) 151
AlwI GGATC 3 cut(s) 55, 742, 1042
Ama87I CYCGRG 2 cut(s) 144, 645
Aor51HI AGCGCT 1 cut(s) 513
AoxI GGCC 1 cut(s) 1115
ApeKI GCWGC 4 cut(s) 560, 802, 1328, 1372
AspLEI GCGC 3 cut(s) 407, 514, 1009
AspS9I GGNCC 3 cut(s) 472, 716, 972
AsuC2I CCSGG 1 cut(s) 501
AsuHPI GGTGA 2 cut(s) 33, 1231
AvaI CYCGRG 2 cut(s) 144, 645
AvaII GGWCC 3 cut(s) 472, 716, 972
BanI GGYRCC 1 cut(s) 1006
BanII GRGCYC 1 cut(s) 151
BarI GAAGNNNNNNTAC 2 cut(s) 829, 861
BbsI GAAGAC 2 cut(s) 587, 1387
Bbv12I GWGCWC 1 cut(s) 151
BbvI GCAGC 4 cut(s) 547, 814, 1315, 1359
BccI CCATC 4 cut(s) 122, 183, 209, 1252
BceAI ACGGC 1 cut(s) 685
BciT130I CCWGG 1 cut(s) 45
BclI TGATCA 3 cut(s) 190, 448, 568
BcnI CCSGG 1 cut(s) 501
BfaI CTAG 2 cut(s) 77, 152
BfmI CTRYAG 1 cut(s) 879
BfoI RGCGCY 2 cut(s) 515, 1010
BisI GCNGC 4 cut(s) 561, 803, 1329, 1373
BlsI GCNGC 4 cut(s) 562, 804, 1330, 1374
Bme1390I CCNGG 2 cut(s) 45, 501
Bme18I GGWCC 3 cut(s) 472, 716, 972
BmeRI GACNNNNNGTC 1 cut(s) 1267
BmeT110I CYCGRG 2 cut(s) 144, 645
BmgBI CACGTC 1 cut(s) 999
BmgT120I GGNCC 3 cut(s) 472, 716, 972
BmiI GGNNCC 2 cut(s) 64, 1008
BmrFI CCNGG 2 cut(s) 45, 501
BmsI GCATC 2 cut(s) 47, 1421
BpiI GAAGAC 2 cut(s) 587, 1387
BpuEI CTTGAG 2 cut(s) 284, 659
BpuMI CCSGG 1 cut(s) 501
BsaHI GRCGYC 2 cut(s) 246, 1007
BsaJI CCNNGG 2 cut(s) 517, 751
BsaXI ACNNNNNCTCC 2 cut(s) 1327, 1357
Bsc4I CCNNNNNNNGG 4 cut(s) 556, 789, 817, 1382
Bse118I RCCGGY 1 cut(s) 532
Bse3DI GCAATG 1 cut(s) 1323
BseBI CCWGG 1 cut(s) 45
BseDI CCNNGG 2 cut(s) 517, 751
BseGI GGATG 2 cut(s) 802, 1349
BseLI CCNNNNNNNGG 4 cut(s) 556, 789, 817, 1382
BseMI GCAATG 1 cut(s) 1323
BseXI GCAGC 4 cut(s) 547, 814, 1315, 1359
Bsh1285I CGRYCG 1 cut(s) 550
BshFI GGCC 1 cut(s) 1117
BshNI GGYRCC 1 cut(s) 1006
BsiEI CGRYCG 1 cut(s) 550
BsiHKAI GWGCWC 1 cut(s) 151
BsiHKCI CYCGRG 2 cut(s) 144, 645
BsiSI CCGG 4 cut(s) 458, 500, 533, 811
BslFI GGGAC 1 cut(s) 263
BslI CCNNNNNNNGG 4 cut(s) 556, 789, 817, 1382
BsmFI GGGAC 1 cut(s) 263
BsnI GGCC 1 cut(s) 1117
BsoBI CYCGRG 2 cut(s) 144, 645
Bsp1286I GDGCHC 1 cut(s) 151
Bsp143I GATC 7 cut(s) 47, 190, 448, 568, 747, 1034, 1074
BspACI CCGC 5 cut(s) 5, 550, 698, 756, 1252
BspANI GGCC 1 cut(s) 1117
BspLI GGNNCC 2 cut(s) 64, 1008
BspPI GGATC 3 cut(s) 55, 742, 1042
BspQI GCTCTTC 1 cut(s) 852
BspT107I GGYRCC 1 cut(s) 1006
BsrDI GCAATG 1 cut(s) 1323
BsrFI RCCGGY 1 cut(s) 532
BssAI RCCGGY 1 cut(s) 532
BssECI CCNNGG 2 cut(s) 517, 751
BssMI GATC 7 cut(s) 47, 190, 448, 568, 747, 1034, 1074
BssNI GRCGYC 2 cut(s) 246, 1007
BssT1I CCWWGG 1 cut(s) 751
Bst2UI CCWGG 1 cut(s) 45
Bst4CI ACNGT 8 cut(s) 70, 121, 277, 357, 720, 779, 1061, 1145
Bst6I CTCTTC 2 cut(s) 190, 852
BstACI GRCGYC 2 cut(s) 246, 1007
BstC8I GCNNGC 4 cut(s) 510, 524, 1017, 1173
BstDEI CTNAG 2 cut(s) 1025, 1289
BstF5I GGATG 2 cut(s) 802, 1349
BstH2I RGCGCY 2 cut(s) 515, 1010
BstHHI GCGC 3 cut(s) 407, 514, 1009
BstKTI GATC 7 cut(s) 50, 193, 451, 571, 750, 1037, 1077
BstMBI GATC 7 cut(s) 47, 190, 448, 568, 747, 1034, 1074
BstMCI CGRYCG 1 cut(s) 550
BstMWI GCNNNNNNNGC 4 cut(s) 656, 799, 837, 1313
BstNI CCWGG 1 cut(s) 45
BstSCI CCNGG 2 cut(s) 43, 499
BstSFI CTRYAG 1 cut(s) 879
BstV1I GCAGC 4 cut(s) 547, 814, 1315, 1359
BstV2I GAAGAC 2 cut(s) 587, 1387
BstX2I RGATCY 1 cut(s) 1034
BstYI RGATCY 1 cut(s) 1034
BsuRI GGCC 1 cut(s) 1117
BtrI CACGTC 1 cut(s) 999
BtsCI GGATG 2 cut(s) 802, 1349
BtsI GCAGTG 2 cut(s) 354, 1092
BtsIMutI CAGTG 5 cut(s) 354, 1057, 1077, 1092, 1150
Cac8I GCNNGC 4 cut(s) 510, 524, 1017, 1173
CfoI GCGC 3 cut(s) 407, 514, 1009
Cfr10I RCCGGY 1 cut(s) 532
Cfr13I GGNCC 3 cut(s) 472, 716, 972
CpoI CGGWCCG 1 cut(s) 716
CseI GACGC 1 cut(s) 254
Csp6I GTAC 4 cut(s) 358, 430, 846, 944
CspCI CAANNNNNGTGG 2 cut(s) 1215, 1250
CspI CGGWCCG 1 cut(s) 716
CviAII CATG 4 cut(s) 446, 766, 1031, 1264
CviQI GTAC 4 cut(s) 358, 430, 846, 944
DdeI CTNAG 2 cut(s) 1025, 1289
DinI GGCGCC 1 cut(s) 1008
DpnI GATC 7 cut(s) 49, 192, 450, 570, 749, 1036, 1076
DpnII GATC 7 cut(s) 47, 190, 448, 568, 747, 1034, 1074
DriI GACNNNNNGTC 1 cut(s) 1267
Eam1104I CTCTTC 2 cut(s) 190, 852
Eam1105I GACNNNNNGTC 1 cut(s) 1267
EarI CTCTTC 2 cut(s) 190, 852
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 149
Eco130I CCWWGG 1 cut(s) 751
Eco24I GRGCYC 1 cut(s) 151
Eco47I GGWCC 3 cut(s) 472, 716, 972
Eco47III AGCGCT 1 cut(s) 513
Eco53kI GAGCTC 1 cut(s) 149
Eco57I CTGAAG 1 cut(s) 1101
Eco88I CYCGRG 2 cut(s) 144, 645
EcoICRI GAGCTC 1 cut(s) 149
EcoO109I RGGNCCY 1 cut(s) 472
EcoRII CCWGG 1 cut(s) 43
EcoT14I CCWWGG 1 cut(s) 751
EcoT38I GRGCYC 1 cut(s) 151
EgeI GGCGCC 1 cut(s) 1008
EheI GGCGCC 1 cut(s) 1008
ErhI CCWWGG 1 cut(s) 751
FaeI CATG 4 cut(s) 449, 769, 1034, 1267
FaqI GGGAC 1 cut(s) 263
FatI CATG 4 cut(s) 445, 765, 1030, 1263
FauI CCCGC 1 cut(s) 705
FauNDI CATATG 1 cut(s) 565
FbaI TGATCA 3 cut(s) 190, 448, 568
FblI GTMKAC 1 cut(s) 129
Fnu4HI GCNGC 4 cut(s) 561, 803, 1329, 1373
FokI GGATG 2 cut(s) 809, 1336
FriOI GRGCYC 1 cut(s) 151
Fsp4HI GCNGC 4 cut(s) 561, 803, 1329, 1373
FspBI CTAG 2 cut(s) 77, 152
GlaI GCGC 3 cut(s) 406, 513, 1008
GluI GCNGC 4 cut(s) 561, 803, 1329, 1373
HaeII RGCGCY 2 cut(s) 515, 1010
HaeIII GGCC 1 cut(s) 1117
HapII CCGG 4 cut(s) 458, 500, 533, 811
HgaI GACGC 1 cut(s) 254
HhaI GCGC 3 cut(s) 407, 514, 1009
Hin1I GRCGYC 2 cut(s) 246, 1007
Hin1II CATG 4 cut(s) 449, 769, 1034, 1267
Hin6I GCGC 3 cut(s) 405, 512, 1007
HinP1I GCGC 3 cut(s) 405, 512, 1007
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HinfI GANTC 4 cut(s) 731, 925, 1054, 1268
HpaII CCGG 4 cut(s) 458, 500, 533, 811
HphI GGTGA 2 cut(s) 33, 1231
Hpy166II GTNNAC 2 cut(s) 130, 1141
Hpy188I TCNGA 8 cut(s) 190, 518, 716, 730, 736, 1129, 1273, 1369
Hpy188III TCNNGA 2 cut(s) 301, 545
Hpy8I GTNNAC 2 cut(s) 130, 1141
Hpy99I CGWCG 2 cut(s) 248, 488
HpyAV CCTTC 8 cut(s) 217, 343, 601, 637, 662, 1237, 1271, 1363
HpyCH4III ACNGT 8 cut(s) 70, 121, 277, 357, 720, 779, 1061, 1145
HpyCH4IV ACGT 5 cut(s) 486, 785, 848, 998, 1285
HpyCH4V TGCA 4 cut(s) 352, 563, 1226, 1412
HpyF10VI GCNNNNNNNGC 4 cut(s) 656, 799, 837, 1313
HpyF3I CTNAG 2 cut(s) 1025, 1289
HpySE526I ACGT 5 cut(s) 486, 785, 848, 998, 1285
Hsp92I GRCGYC 2 cut(s) 246, 1007
Hsp92II CATG 4 cut(s) 449, 769, 1034, 1267
HspAI GCGC 3 cut(s) 405, 512, 1007
KasI GGCGCC 1 cut(s) 1006
Ksp22I TGATCA 3 cut(s) 190, 448, 568
Kzo9I GATC 7 cut(s) 47, 190, 448, 568, 747, 1034, 1074
LguI GCTCTTC 1 cut(s) 852
LmnI GCTCC 1 cut(s) 519
Lsp1109I GCAGC 4 cut(s) 547, 814, 1315, 1359
LweI GCATC 2 cut(s) 47, 1421
MaeI CTAG 2 cut(s) 77, 152
MaeII ACGT 5 cut(s) 486, 785, 848, 998, 1285
MaeIII GTNAC 3 cut(s) 994, 1051, 1087
MalI GATC 7 cut(s) 49, 192, 450, 570, 749, 1036, 1076
MboI GATC 7 cut(s) 47, 190, 448, 568, 747, 1034, 1074
MboII GAAGA 9 cut(s) 129, 170, 177, 202, 587, 869, 1252, 1286, 1387
MflI RGATCY 1 cut(s) 1034
MhlI GDGCHC 1 cut(s) 151
MluCI AATT 3 cut(s) 157, 612, 872
Mly113I GGCGCC 1 cut(s) 1007
MlyI GAGTC 4 cut(s) 725, 934, 1048, 1277
MmeI TCCRAC 2 cut(s) 753, 1251
MseI TTAA 2 cut(s) 272, 867
MspA1I CMGCKG 1 cut(s) 931
MspI CCGG 4 cut(s) 458, 500, 533, 811
MspR9I CCNGG 2 cut(s) 45, 501
MvaI CCWGG 1 cut(s) 45
MwoI GCNNNNNNNGC 4 cut(s) 656, 799, 837, 1313
NarI GGCGCC 1 cut(s) 1007
NciI CCSGG 1 cut(s) 501
NdeI CATATG 1 cut(s) 565
NdeII GATC 7 cut(s) 47, 190, 448, 568, 747, 1034, 1074
NlaIII CATG 4 cut(s) 449, 769, 1034, 1267
NlaIV GGNNCC 2 cut(s) 64, 1008
NmeAIII GCCGAG 1 cut(s) 831
NmuCI GTSAC 3 cut(s) 994, 1051, 1087
PaeR7I CTCGAG 2 cut(s) 144, 645
PciSI GCTCTTC 1 cut(s) 852
PcsI WCGNNNNNNNCGW 1 cut(s) 552
PflMI CCANNNNNTGG 1 cut(s) 789
PfoI TCCNGGA 1 cut(s) 499
PkrI GCNGC 4 cut(s) 562, 804, 1330, 1374
PleI GAGTC 4 cut(s) 725, 933, 1048, 1276
PluTI GGCGCC 1 cut(s) 1010
PpsI GAGTC 4 cut(s) 725, 933, 1048, 1276
PpuMI RGGWCCY 1 cut(s) 472
PsiI TTATAA 1 cut(s) 617
Psp124BI GAGCTC 1 cut(s) 151
Psp5II RGGWCCY 1 cut(s) 472
Psp6I CCWGG 1 cut(s) 43
PspGI CCWGG 1 cut(s) 43
PspN4I GGNNCC 2 cut(s) 64, 1008
PspPI GGNCC 3 cut(s) 472, 716, 972
PspPPI RGGWCCY 1 cut(s) 472
PspXI VCTCGAGB 2 cut(s) 144, 645
PsuI RGATCY 1 cut(s) 1034
PvuII CAGCTG 1 cut(s) 931
RsaI GTAC 4 cut(s) 359, 431, 847, 945
RsaNI GTAC 4 cut(s) 358, 430, 846, 944
Rsr2I CGGWCCG 1 cut(s) 716
RsrII CGGWCCG 1 cut(s) 716
SacI GAGCTC 1 cut(s) 151
SalI GTCGAC 1 cut(s) 128
SapI GCTCTTC 1 cut(s) 852
SaqAI TTAA 2 cut(s) 272, 867
SatI GCNGC 4 cut(s) 561, 803, 1329, 1373
Sau3AI GATC 7 cut(s) 47, 190, 448, 568, 747, 1034, 1074
Sau96I GGNCC 3 cut(s) 472, 716, 972
SchI GAGTC 4 cut(s) 725, 934, 1048, 1277
ScrFI CCNGG 2 cut(s) 45, 501
SduI GDGCHC 1 cut(s) 151
SfaNI GCATC 2 cut(s) 47, 1421
SfcI CTRYAG 1 cut(s) 879
SfoI GGCGCC 1 cut(s) 1008
Sfr274I CTCGAG 2 cut(s) 144, 645
SinI GGWCC 3 cut(s) 472, 716, 972
SlaI CTCGAG 2 cut(s) 144, 645
SmlI CTYRAG 4 cut(s) 144, 299, 638, 645
SmoI CTYRAG 4 cut(s) 144, 299, 638, 645
Sse9I AATT 3 cut(s) 157, 612, 872
SsiI CCGC 5 cut(s) 5, 550, 698, 756, 1252
SspDI GGCGCC 1 cut(s) 1006
SspMI CTAG 2 cut(s) 77, 152
SstI GAGCTC 1 cut(s) 151
StyD4I CCNGG 2 cut(s) 43, 499
StyI CCWWGG 1 cut(s) 751
TaaI ACNGT 8 cut(s) 70, 121, 277, 357, 720, 779, 1061, 1145
TaiI ACGT 5 cut(s) 489, 788, 851, 1001, 1288
TasI AATT 3 cut(s) 157, 612, 872
Tru1I TTAA 2 cut(s) 272, 867
Tru9I TTAA 2 cut(s) 272, 867
TscAI CASTG 5 cut(s) 354, 1064, 1084, 1092, 1150
TseFI GTSAC 3 cut(s) 994, 1051, 1087
TseI GCWGC 4 cut(s) 560, 802, 1328, 1372
Tsp45I GTSAC 3 cut(s) 994, 1051, 1087
TspDTI ATGAA 4 cut(s) 26, 325, 712, 1181
TspRI CASTG 5 cut(s) 354, 1064, 1084, 1092, 1150
Van91I CCANNNNNTGG 1 cut(s) 789
VpaK11BI GGWCC 3 cut(s) 472, 716, 972
XcmI CCANNNNNNNNNTGG 2 cut(s) 121, 790
XhoI CTCGAG 2 cut(s) 144, 645
XmiI GTMKAC 1 cut(s) 129
XspI CTAG 2 cut(s) 77, 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.