Rorug05G0226000

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0004769
Physical Location & Seq
Reverse (-)
23421499 .. 23431593
10095 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0226000.1

Sequence Viewer

Length: 5616 bp
ATGCGATCATCGCCGAGTGGTGGTAAACAGTGGGGGCAGAGGAATCGGAAGAAGCACAAGAGGCTTGATGCTATTAGTGAAACCGTGTATAAGAGGAATCATCTTCAGGCTAATGATGGGCCGGGGCCGGGTCCCGGGAGCGGTGAATCGGAGCTTCGGAGGAGCTCCAGGGCACGCCGGGCCCCCGTTGTGCTTGATTTGTCCCCGGGGCCGCCCAAGAAGAGGAGGAGGCTTGGTAAGAATGGGAGATTGAGTGGGGGGAAGAATGTGAAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGTGGAGGGAGGGTGGAAGTCGAGGTTGAGATCGAGGAGGGGGCATTCGGGGTTTGTGAGAGGGAAGAGGAAGCTATTTGAAGATGTGAGTGGAGGGAAGGTAGTGGGGAGTGAGCTGGATGATGAGAATGAGGAAGGGTTGGAAGGTGGGAGGCCGAAGGTTGTGAAGTCGAAGAGACCAGGGAGGGTTAGAGCAACGCATGGTTCGGAGCATGAAGAGAATGAGTTGCTTGAAGTTAAGGAGGAAGTTGTGGGGGAAGAAGAGGAGGTGATGAGGGAGGACAGGGATAATTTAATGCAGTTGGATTGCGAAGAGGATGGTGGAATTGAGAGGGAAACTGTGGAAGGTGATTCCACAAAGATAATTGAGGCAGTGGGGGATTTACAGTTAGAGGAGGAGTGCACTGGCAATGAGAAAGTGGAAGCTGCTGAAACTGCAGATGGTGGGGAAATGATGGAACAAGTTGATGAACAGGTGGAGCAATCAGTTGATGTGATTGAAGACGAAAAAGATGATAAACAGATGGAACAAGAGCAAGTACCGTGTGTTGTTGAAGGAGAAGATCAAAGTGACGCCATAGAAGCTGTTGGAGTCCCCAGAGTTGAAGCGGAAGTTGAAGGTGACGATGGGAAGGATTCACATTTGACTGAGCATGATGGAAAACTTCCAATAGAAGTGAATACTGTGAAGGTGGATATGTCCAAAGATGGAAAGTCACGGATTAAGGAGGGCAGACGATGTGGTTTGTGTGGGGGAGGGACTGATGGTATGCCTCCAAAAATATTAGCTCAGGATACGGTTGACATTGAGAATGAAGCGTATAGTGGCTCTTCAGCCTCTGAGAAATTTGACTATAACATATGGGATGGTTTTGGTGATGAACCTGGCTGGCTTGGACGTCTCTTGGGTCCAATAAATGATCGTTATGGCATTGCTGGAACATGGGTTCATCAACACTGTGCTGTATGGAGTCCAGAGGTTTACTTTGCTGGTTTAGGATGCTTAAAAAATATAAGGGCCGCTCTGTGCAGAGGGAGAGCGTTAAAATGCACCCGCTGTGGAAGGCCAGGAGCAACTATTGGATGCCGTGTTGATCGGTGTTCAAGAACTTACCACTTGCCTTGTGCACGAGCTATGAATTGCGTATTTGATCATCGCAAGTTTCTTATTGCCTGTACTGGTCATAGGAAACTCTTCCAGCCTCTTGGTTATCAGTACTTAGCCCGCAAAAAGAAATTGAAGGTTAAGAAAATGAAGTTTGAAATCAGAAAGCTATCAAATGATGCTTTGCGAAAGGATATTGAGGCAGAAGAAAAGTGGTTGGAGAATTGTGGAGATGATGAAGAGTTTTTGAAACGTGAAAGCAAGAGGCTACATCGAGATTTGGTGAGAATTGCACCTGTGTACATTGGAGGCTCTGACTCTGAGAGTGGCAAACTGTTTCAGGGTTGGGAATCTGTTGCAGGTCTTCAAAATGTCATTAGATGCATGAAGGAAGTTGTCATATTACCTCTTCTATATCCAGAATTCTTTGATAGTCTCAGCCTCACACCTCCTAGAGGTGTTCTATTGCATGGGTATCCTGGAACAGGTAAAACTCTTGTTGTGCGGGCATTAATAGGTGCATGTGCACGTGGTGATAGACGAATAGCATATTTTGCTCGTAAAGGTGCTGATTGTTTAGGAAAATATGTTGGTGATGCTGAGCGCCAGCTAAGACTCTTGTTTCAGGTTGCTGAGAGATGTCAACCTTCTATAATATTCTTTGATGAGATTGATGGGTTGGCACCTTCTAGAACTAGGCAACAAGATCAGACACATAGTTCAGTTGTGTCTACACTGCTTGCTTTAATGGATGGTTTGAAATCTCGAGGTTCTGTTGTAGTGATAGGTGCTACAAATCGTCCTGATGCCGTTGATCCAGCACTAAGGCGGCCTGGAAGATTTGATAGGGAAATCTATTTTCCACTACCGTCAGAAGAGGACAGAGCTTCCATTCTTTCTGTTCATACTCAAAAATGGCCCAAACCAGTCAGTGGATCCGTGCTTAAGTCGATTGCAAGAGGAACTGCTGGATTTGCTGGTGCAGATCTGCAGGCACTTTGCACTCAAGCAGCCATAATTTCTTTGAAAAGGAATTTCCCTTTGCAAGAAGTTTTGTCTGCTGCTGGAAAGAAAGATTCCGAGTCCAAACGCCTCCCTCTACCTGCCTTTGTAGTGGAGGACAGGGATTGGTTGGAGGCTCTGACATGTTCTCCACCTCCCTGCTCTCGTAGGGAAGTAGGAATAGCTGCTAATGAAGTAATATGCTCTCCTCTTCCAACCCACCTTATCCCATGTCTTCTACAACCATTATCTACCATGCTTGTATCCCTTTATCTTGATGAACGGCTCTGGTTGCCAACTCCTCTGAGAAGAGCTGCAACAATGATTGAAAGTGTGGTGGTTTCTGCCTTGAATAGGAAAAATATGCTCAGTGATCGCTGGTGGTCCCATATTGATGTTTTACTTCAGGAAGCAGATGTTGCAAAGGACATAGAGAGAAAGCTTTTGCATGCTGGAATCTTACATGGAGATACTGCTCTTGCTGATTCTGATGTTTGCAATGATGATGTTGATGACGGAATTTTGAATTTTGAGCCTTCTGTTAAACACCATGGTGGTACTCACCCAAGTTTGTTGCAAAACACATTAGTTGCCTCAACGTACAAACCAGGATTTCGGATATTGATTGCTGGAAATCCCAGATCTGGCCAAAGGCATCTTGCTTCCTGCCTTCTTCACTGTTTTGTTGGGAATGTAGAAATCCAGAAGGTTGATTTGGCTACAGTTTTGCTAGAAGGACACGGAGATATGGCGCAAGGGATAACACAAATATTAAAGAAATGTGCCAGCATGGGGTCGTGTATAGTTTTCATGCCAAGAATTGATTTGTGGGCAGTGGAGACACCTAATCAAGTAACAGAAGACAGTGATGCAGATTTATCAATCCATCAATGTCCTGAAAATGAAAAGCATCAACATCCTGAGAATGAAAAGTCATATTTTGCGCGTGGTCTGGAGGAAAGTGTGTCCTTATCACAGCAATGCAAATCAGAAGAAATGTTAGAGTGCCAAGATGATGTTGCTCAGAGTGCTTCACATGCTTGGAACTTGTTTGTGGAGCAGGTGGAGTCTCTAAGTGTCTCTGCATCCTTAATGATTCTGGCTACATCAGAAGTTCCATGTCCAGTGCTTCCGGTTAGAATAAGGCAGTTCTTTAAGAGTGACATTTTAAATGGCCATCGGTCAGTTCCTGTGAAGCATACAGTTCCCAGGTTTTCTGTGCAGGTTGATGGAAATTTCAACCATGATCTGGTGATCAATCTATCTTCAGCAGAGTTATCAAGGGATCTCGTTCAACAGATTGTTCTGTTAGTTCATCAAACTTCTCACATTCATACAACTTCATGCAAGGAGAGAGACTTTCATGGTATAAATGGTCAGTCCAAGATGGTTGATCACAATGCAGATCATGGATCAGCTGATGCAAACAACAATTTAACTCTACCTCCTGTTGATTCTCTTCTTAAAGCTTCTGCACCACCTAACAATATAACTGGAAATGGGAAATCAAGCCTTCTGCTAGCAATATCTTCATTTGGCTATCAGATACTGCGATATCCTCATTTTGCTGAACTTTGTTGGTTCACTTCAAAACTTAAAGAAGGTCCTTCTGCAGACATAAGTGGACCTTGGAAGGGTTGGCCATTCAATTCCTGTATAGTTCGTCCTAACAACTCGCTAGAAATGGTAGCTGTGGCAAAGAATATTAAAAGCAAAGAAAACTTGGGCCTAGTTAGAGGCCTGATTGCTGTTGGTTTATTGGCATATAGAGGTCTCTACACATCTCTCAGAGAAGTCTCTTCTGAGGTACGGAAGGTTCTTGAGATTCTAGTTGCGCAGATCAATGCAAAAGTTCAAGCCGGGAAAGATAGATATCAATATGTTCGCCTTTTGTCGCAAGTGGCCTATCTGGAAGATGTGGTCAATAGCTGGGCATACACCTTGCAGAGTTTAGAGCAGGATGCTCCATTGGCAGATGCTAAGCTTACCGGTCCGAGACTTCCAGACGATAACCATATGGATGATCAAGTTCAAAGCGAGGATTCCAAGCCAAAGGTTACAAGCAAATGCTCCAGTGAGCACGAAGTGCTGGAAATTGTCCCTGAAGGGTTTGATGCTGAAAAAGTTGTCAGTATTGACGTGAATGAACAAGTTACTGATTTGGGTTGTTCTGAGGTTAGACTTGCAAGTTTAGATTGTTCTGGACAGAAGATTGTCCCATCTGATTCTACCCTGGATAATTGTCTTAAAGATTCTGATGAAGTTTTGAATGACCAGAATGGGACAAACCCTAAACCCCACGAGTCAGAAAATGACAAACACCATACAGTTGTTGCAGGAGATTCTGAATCTTTGAAACGTCCAAATGGATTTGAATGCACTGAATCTGTTGCTATTCCTGAGGATAGTCCGACTTCTGATATATTTGGCAGCACTAAGCTCTCTAGTTCTTTGACCAGTTACAACAACCTTAATGGTTTGTCCTTGACAGAGGCTGGTAGTAGACATAATGATGGTAAGGCTGATGCTGATGAGGTTACTGTAGACGTCAACTTCCCAAGCACCACCAGTCAAACCAATCTGCCTGAGTGCATAGATAAGCCTGATGCAAACTTCTCAAGTAAAACCAATGCTGATGTGCATAACGCTGATGTCAACTTCCCTCCCAAAATCAGCCCCTCTACGAAGTCTGAGTTTGTATGCGTATATCATTGTTGCTCTGAATGCCTAGATACCCTCCACAGTTTGACACAGAAAATTCTTATTGAGGAGTGGCGATCAAATGGGAGCCAATGGACAGTGGAGGATGTTCATGATATTGTGGCATCACTATCTGTGGATCTTCTTTCAGCGGTTAGAAGAATTCATGTTTCCGGAGGTTTCAACAATTCATTTGATGATAAAAGGAGACACAGAAATACTGAAACATATGAGTGGCCGGAATCAGGAACATGTGATTGCAATATCTCAGAAAATAAGATTCTTTCACCTGCTGAATGTAGATGCCACCCCAGCAGGGAGAGCTTCACTCAAAAGGCAAATGCTTCCGCAAATACTCATCTCAGGTTTGATTCAAAATTTGTTTTTCGAGATGGTTTGCTGGTTCATATGCATCCAGACAAAGATGTTTCTTTCCACTGTAAATTCGAGACGCTCTGCCTCTGTTCACTTATAGAGTTGATAGTAATGACGAAGTCACCTTTTCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

1871

Amino Acids

207.05

Weight (kDa)

5.57

Isoelectric Point (pI)

49.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-HC5HC2H_2 PF13832 413 - 487 6.4e-08 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 417 - 495 2.3e-10 PHD-like zinc-binding domain
AAA PF00004 622 - 757 1.3e-37 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 783 - 815 5.7e-08 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 3457, 5404
AatII GACGTC 2 cut(s) 1201, 4956
Acc16I TGCGCA 1 cut(s) 4242
Acc36I ACCTGC 5 cut(s) 1754, 2515, 3457, 3619, 5404
AccB1I GGYRCC 1 cut(s) 2086
AccB7I CCANNNNNTGG 2 cut(s) 2336, 3655
AccBSI CCGCTC 2 cut(s) 141, 1322
AccI GTMKAC 3 cut(s) 2135, 4909, 4950
AccII CGCG 1 cut(s) 3352
AccIII TCCGGA 1 cut(s) 5279
AclWI GGATC 6 cut(s) 2213, 2334, 2347, 3699, 3826, 5253
AcoI YGGCCR 4 cut(s) 3052, 3580, 4046, 5342
AcuI CTGAAG 5 cut(s) 89, 1116, 2795, 3657, 4530
AcvI CACGTG 1 cut(s) 1934
AcyI GRCGYC 3 cut(s) 873, 1198, 4953
AdeI CACNNNGTG 2 cut(s) 1937, 4492
AfaI GTAC 7 cut(s) 840, 1477, 1517, 1706, 2965, 3008, 4215
AflII CTTAAG 1 cut(s) 2348
AflIII ACRYGT 2 cut(s) 2549, 5357
AgeI ACCGGT 1 cut(s) 4394
AjiI CACGTC 1 cut(s) 4546
AjnI CCWGG 9 cut(s) 167, 478, 1183, 1366, 1882, 2236, 3013, 3614, 4638
AjuI GAANNNNNNNTTGG 2 cut(s) 3104, 3136
AleI CACNNNNGTG 1 cut(s) 2958
AloI GAACNNNNNNTCC 2 cut(s) 1230, 1262
Alw21I GWGCWC 5 cut(s) 167, 704, 1429, 1933, 4488
Alw44I GTGCAC 3 cut(s) 700, 1425, 1929
AlwI GGATC 6 cut(s) 2213, 2334, 2347, 3699, 3826, 5253
AlwNI CAGNNNCTG 4 cut(s) 1139, 3596, 3955, 4901
Ama87I CYCGRG 3 cut(s) 134, 205, 2169
Aor13HI TCCGGA 1 cut(s) 5279
ApaI GGGCCC 1 cut(s) 184
ApaLI GTGCAC 3 cut(s) 700, 1425, 1929
ApeKI GCWGC 6 cut(s) 725, 2414, 2465, 2591, 2720, 4836
AseI ATTAAT 1 cut(s) 1916
AsiGI ACCGGT 1 cut(s) 4394
Asp700I GAANNNNTTC 1 cut(s) 1493
AspLEI GCGC 4 cut(s) 2010, 3160, 3352, 4243
AsuC2I CCSGG 8 cut(s) 123, 129, 135, 136, 179, 206, 207, 4267
AsuNHI GCTAGC 1 cut(s) 3925
AvaI CYCGRG 3 cut(s) 134, 205, 2169
AvaII GGWCC 6 cut(s) 131, 1208, 2790, 4010, 4031, 4397
AxyI CCTNAGG 1 cut(s) 4806
BaeGI GKGCMC 5 cut(s) 175, 184, 704, 1429, 1933
BalI TGGCCA 3 cut(s) 3054, 3582, 4048
BamHI GGATCC 1 cut(s) 2339
BanI GGYRCC 1 cut(s) 2086
BanII GRGCYC 2 cut(s) 167, 184
BauI CACGAG 2 cut(s) 1428, 4706
BbrPI CACGTG 1 cut(s) 1934
BbsI GAAGAC 4 cut(s) 807, 1760, 2633, 3273
Bbv12I GWGCWC 5 cut(s) 167, 704, 1429, 1933, 4488
BbvI GCAGC 6 cut(s) 712, 2426, 2452, 2578, 2707, 4848
BceAI ACGGC 3 cut(s) 1371, 2198, 2705
BcgI CGANNNNNNTGC 2 cut(s) 26, 60
BciT130I CCWGG 9 cut(s) 169, 480, 1185, 1368, 1884, 2238, 3015, 3616, 4640
BciVI GTATCC 3 cut(s) 1087, 1890, 2680
BclI TGATCA 4 cut(s) 1450, 3660, 3799, 4429
BcnI CCSGG 8 cut(s) 123, 129, 135, 136, 179, 206, 207, 4267
BfmI CTRYAG 5 cut(s) 735, 2393, 3126, 4017, 4947
BfoI RGCGCY 1 cut(s) 2011
BfrI CTTAAG 1 cut(s) 2348
BfuAI ACCTGC 5 cut(s) 1754, 2515, 3457, 3619, 5404
BfuI GTATCC 3 cut(s) 1087, 1890, 2680
BglII AGATCT 2 cut(s) 2389, 3047
BisI GCNGC 9 cut(s) 212, 726, 1320, 2234, 2415, 2466, 2592, 2721, 4837
BlpI GCTNAGC 2 cut(s) 2004, 4386
BlsI GCNGC 9 cut(s) 213, 727, 1321, 2235, 2416, 2467, 2593, 2722, 4838
BmcAI AGTACT 1 cut(s) 1517
Bme18I GGWCC 6 cut(s) 131, 1208, 2790, 4010, 4031, 4397
BmeT110I CYCGRG 3 cut(s) 134, 205, 2169
BmgBI CACGTC 1 cut(s) 4546
BmtI GCTAGC 1 cut(s) 3929
BpiI GAAGAC 4 cut(s) 807, 1760, 2633, 3273
BplI GAGNNNNNCTC 2 cut(s) 5419, 5451
BpmI CTGGAG 3 cut(s) 151, 3380, 4462
Bpu10I CCTNAGC 1 cut(s) 1089
Bpu1102I GCTNAGC 2 cut(s) 2004, 4386
BpuEI CTTGAG 3 cut(s) 2394, 4247, 5008
BpuMI CCSGG 8 cut(s) 123, 129, 135, 136, 179, 206, 207, 4267
BsaAI YACGTR 1 cut(s) 1934
BsaBI GATNNNNATC 1 cut(s) 4278
BsaHI GRCGYC 3 cut(s) 873, 1198, 4953
BsaI GGTCTC 2 cut(s) 469, 4184
BsaWI WCCGGW 3 cut(s) 3538, 4394, 5279
Bse118I RCCGGY 1 cut(s) 4394
Bse1I ACTGG 8 cut(s) 709, 1483, 2330, 3530, 3904, 4479, 4863, 4974
Bse21I CCTNAGG 1 cut(s) 4806
Bse3DI GCAATG 4 cut(s) 715, 1230, 2911, 3392
Bse8I GATNNNNATC 1 cut(s) 4278
BseAI TCCGGA 1 cut(s) 5279
BseBI CCWGG 9 cut(s) 169, 480, 1185, 1368, 1884, 2238, 3015, 3616, 4640
BseJI GATNNNNATC 1 cut(s) 4278
BseMI GCAATG 4 cut(s) 715, 1230, 2911, 3392
BseNI ACTGG 8 cut(s) 709, 1483, 2330, 3530, 3904, 4479, 4863, 4974
BseSI GKGCMC 5 cut(s) 175, 184, 704, 1429, 1933
BseXI GCAGC 6 cut(s) 712, 2426, 2452, 2578, 2707, 4848
BseYI CCCAGC 2 cut(s) 4335, 5417
BsgI GTGCAG 4 cut(s) 1348, 2406, 3647, 3864
Bsh1236I CGCG 1 cut(s) 3352
BshNI GGYRCC 1 cut(s) 2086
BshTI ACCGGT 1 cut(s) 4394
BsiHKAI GWGCWC 5 cut(s) 167, 704, 1429, 1933, 4488
BsiHKCI CYCGRG 3 cut(s) 134, 205, 2169
BslFI GGGAC 8 cut(s) 117, 187, 878, 1072, 2776, 4490, 4607, 4702
BsmBI CGTCTC 2 cut(s) 1205, 5549
BsmFI GGGAC 8 cut(s) 117, 187, 878, 1072, 2776, 4490, 4607, 4702
BsmI GAATGC 3 cut(s) 343, 4787, 5135
Bso31I GGTCTC 2 cut(s) 469, 4184
BsoBI CYCGRG 3 cut(s) 134, 205, 2169
Bsp120I GGGCCC 1 cut(s) 180
Bsp1286I GDGCHC 7 cut(s) 167, 175, 184, 704, 1429, 1933, 4488
Bsp13I TCCGGA 1 cut(s) 5279
Bsp1407I TGTACA 1 cut(s) 1704
Bsp1720I GCTNAGC 2 cut(s) 2004, 4386
Bsp19I CCATGG 1 cut(s) 2956
BspEI TCCGGA 1 cut(s) 5279
BspFNI CGCG 1 cut(s) 3352
BspHI TCATGA 1 cut(s) 5218
BspMAI CTGCAG 3 cut(s) 739, 2397, 4021
BspMI ACCTGC 5 cut(s) 1754, 2515, 3457, 3619, 5404
BspOI GCTAGC 1 cut(s) 3929
BspPI GGATC 6 cut(s) 2213, 2334, 2347, 3699, 3826, 5253
BspQI GCTCTTC 2 cut(s) 1135, 2710
BspT107I GGYRCC 1 cut(s) 2086
BspTI CTTAAG 1 cut(s) 2348
BspTNI GGTCTC 2 cut(s) 469, 4184
BsrBI CCGCTC 2 cut(s) 141, 1322
BsrDI GCAATG 4 cut(s) 715, 1230, 2911, 3392
BsrFI RCCGGY 1 cut(s) 4394
BsrGI TGTACA 1 cut(s) 1704
BsrI ACTGG 8 cut(s) 709, 1483, 2330, 3530, 3904, 4479, 4863, 4974
BssAI RCCGGY 1 cut(s) 4394
BssNI GRCGYC 3 cut(s) 873, 1198, 4953
BssSI CACGAG 2 cut(s) 1428, 4706
BssT1I CCWWGG 2 cut(s) 2956, 4034
Bst2BI CACGAG 2 cut(s) 1428, 4706
Bst2UI CCWGG 9 cut(s) 169, 480, 1185, 1368, 1884, 2238, 3015, 3616, 4640
BstACI GRCGYC 3 cut(s) 873, 1198, 4953
BstAFI CTTAAG 1 cut(s) 2348
BstAPI GCANNNNNTGC 3 cut(s) 1958, 2825, 4492
BstAUI TGTACA 1 cut(s) 1704
BstBAI YACGTR 1 cut(s) 1934
BstDSI CCRYGG 1 cut(s) 2956
BstENI CCTNNNNNAGG 3 cut(s) 1857, 1887, 2758
BstFNI CGCG 1 cut(s) 3352
BstH2I RGCGCY 1 cut(s) 2011
BstHHI GCGC 4 cut(s) 2010, 3160, 3352, 4243
BstNI CCWGG 9 cut(s) 169, 480, 1185, 1368, 1884, 2238, 3015, 3616, 4640
BstNSI RCATGY 5 cut(s) 1929, 2553, 2858, 3446, 5361
BstSFI CTRYAG 5 cut(s) 735, 2393, 3126, 4017, 4947
BstSLI GKGCMC 5 cut(s) 175, 184, 704, 1429, 1933
BstUI CGCG 1 cut(s) 3352
BstV1I GCAGC 6 cut(s) 712, 2426, 2452, 2578, 2707, 4848
BstV2I GAAGAC 4 cut(s) 807, 1760, 2633, 3273
BstX2I RGATCY 5 cut(s) 2339, 2389, 3047, 3691, 5245
BstXI CCANNNNNNTGG 1 cut(s) 1505
BstYI RGATCY 5 cut(s) 2339, 2389, 3047, 3691, 5245
Bsu36I CCTNAGG 1 cut(s) 4806
BsuI GTATCC 3 cut(s) 1087, 1890, 2680
BtgI CCRYGG 1 cut(s) 2956
BtgZI GCGATG 1 cut(s) 1439
BtrI CACGTC 1 cut(s) 4546
BtsI GCAGTG 3 cut(s) 678, 2138, 3246
BveI ACCTGC 5 cut(s) 1754, 2515, 3457, 3619, 5404
CaiI CAGNNNCTG 4 cut(s) 1139, 3596, 3955, 4901
CciI TCATGA 1 cut(s) 5218
CfoI GCGC 4 cut(s) 2010, 3160, 3352, 4243
Cfr10I RCCGGY 1 cut(s) 4394
Cfr9I CCCGGG 2 cut(s) 134, 205
CpoI CGGWCCG 1 cut(s) 4397
CseI GACGC 2 cut(s) 881, 5566
Csp6I GTAC 7 cut(s) 839, 1476, 1516, 1705, 2964, 3007, 4214
CspAI ACCGGT 1 cut(s) 4394
CspCI CAANNNNNGTGG 2 cut(s) 1403, 1438
CspI CGGWCCG 1 cut(s) 4397
CviQI GTAC 7 cut(s) 839, 1476, 1516, 1705, 2964, 3007, 4214
DraI TTTAAA 1 cut(s) 3576
DraIII CACNNNGTG 2 cut(s) 1937, 4492
EaeI YGGCCR 4 cut(s) 3052, 3580, 4046, 5342
Ecl136II GAGCTC 1 cut(s) 165
Eco130I CCWWGG 2 cut(s) 2956, 4034
Eco147I AGGCCT 1 cut(s) 4146
Eco24I GRGCYC 2 cut(s) 167, 184
Eco31I GGTCTC 2 cut(s) 469, 4184
Eco32I GATATC 2 cut(s) 3962, 4280
Eco47I GGWCC 6 cut(s) 131, 1208, 2790, 4010, 4031, 4397
Eco53kI GAGCTC 1 cut(s) 165
Eco57I CTGAAG 5 cut(s) 89, 1116, 2795, 3657, 4530
Eco72I CACGTG 1 cut(s) 1934
Eco81I CCTNAGG 1 cut(s) 4806
Eco88I CYCGRG 3 cut(s) 134, 205, 2169
EcoICRI GAGCTC 1 cut(s) 165
EcoNI CCTNNNNNAGG 3 cut(s) 1857, 1887, 2758
EcoO109I RGGNCCY 3 cut(s) 131, 181, 4010
EcoRI GAATTC 2 cut(s) 1826, 5268
EcoRII CCWGG 9 cut(s) 167, 478, 1183, 1366, 1882, 2236, 3013, 3614, 4638
EcoRV GATATC 2 cut(s) 3962, 4280
EcoT14I CCWWGG 2 cut(s) 2956, 4034
EcoT22I ATGCAT 2 cut(s) 1790, 5520
EcoT38I GRGCYC 2 cut(s) 167, 184
ErhI CCWWGG 2 cut(s) 2956, 4034
Esp3I CGTCTC 2 cut(s) 1205, 5549
FalI AAGNNNNNCTT 2 cut(s) 4018, 4050
FaqI GGGAC 8 cut(s) 117, 187, 878, 1072, 2776, 4490, 4607, 4702
FauI CCCGC 3 cut(s) 1361, 1532, 1902
FauNDI CATATG 4 cut(s) 1160, 4422, 5335, 5514
FbaI TGATCA 4 cut(s) 1450, 3660, 3799, 4429
FblI GTMKAC 3 cut(s) 2135, 4909, 4950
Fnu4HI GCNGC 9 cut(s) 212, 726, 1320, 2234, 2415, 2466, 2592, 2721, 4837
FriOI GRGCYC 2 cut(s) 167, 184
Fsp4HI GCNGC 9 cut(s) 212, 726, 1320, 2234, 2415, 2466, 2592, 2721, 4837
FspI TGCGCA 1 cut(s) 4242
GlaI GCGC 4 cut(s) 2009, 3159, 3351, 4242
GluI GCNGC 9 cut(s) 212, 726, 1320, 2234, 2415, 2466, 2592, 2721, 4837
GsaI CCCAGC 2 cut(s) 4339, 5421
GsuI CTGGAG 3 cut(s) 151, 3380, 4462
HaeII RGCGCY 1 cut(s) 2011
HgaI GACGC 2 cut(s) 881, 5566
HhaI GCGC 4 cut(s) 2010, 3160, 3352, 4243
Hin1I GRCGYC 3 cut(s) 873, 1198, 4953
Hin6I GCGC 4 cut(s) 2008, 3158, 3350, 4241
HinP1I GCGC 4 cut(s) 2008, 3158, 3350, 4241
HincII GTYRAC 4 cut(s) 1102, 2048, 4957, 5062
HindII GTYRAC 4 cut(s) 1102, 2048, 4957, 5062
HindIII AAGCTT 3 cut(s) 2846, 3873, 4388
HpyCH4IV ACGT 7 cut(s) 1198, 1657, 1933, 3005, 4545, 4765, 4953
HpySE526I ACGT 7 cut(s) 1198, 1657, 1933, 3005, 4545, 4765, 4953
Hsp92I GRCGYC 3 cut(s) 873, 1198, 4953
HspAI GCGC 4 cut(s) 2008, 3158, 3350, 4241
KflI GGGWCCC 1 cut(s) 131
Kpn2I TCCGGA 1 cut(s) 5279
Ksp22I TGATCA 4 cut(s) 1450, 3660, 3799, 4429
LguI GCTCTTC 2 cut(s) 1135, 2710
Lsp1109I GCAGC 6 cut(s) 712, 2426, 2452, 2578, 2707, 4848
MaeII ACGT 7 cut(s) 1198, 1657, 1933, 3005, 4545, 4765, 4953
MbiI CCGCTC 2 cut(s) 141, 1322
MflI RGATCY 5 cut(s) 2339, 2389, 3047, 3691, 5245
MhlI GDGCHC 7 cut(s) 167, 175, 184, 704, 1429, 1933, 4488
MlsI TGGCCA 3 cut(s) 3054, 3582, 4048
MluNI TGGCCA 3 cut(s) 3054, 3582, 4048
MlyI GAGTC 7 cut(s) 900, 1279, 1715, 2013, 2495, 3482, 4718
MmeI TCCRAC 7 cut(s) 420, 582, 868, 1602, 2517, 2645, 4841
Mox20I TGGCCA 3 cut(s) 3054, 3582, 4048
Mph1103I ATGCAT 2 cut(s) 1790, 5520
MroI TCCGGA 1 cut(s) 5279
MroXI GAANNNNTTC 1 cut(s) 1493
MscI TGGCCA 3 cut(s) 3054, 3582, 4048
MslI CAYNNNNRTG 6 cut(s) 2799, 2958, 3385, 4425, 4917, 5338
Msp20I TGGCCA 3 cut(s) 3054, 3582, 4048
MspA1I CMGCKG 3 cut(s) 1356, 3824, 5258
MspCI CTTAAG 1 cut(s) 2348
Mva1269I GAATGC 3 cut(s) 343, 4787, 5135
MvaI CCWGG 9 cut(s) 169, 480, 1185, 1368, 1884, 2238, 3015, 3616, 4640
MvnI CGCG 1 cut(s) 3352
NciI CCSGG 8 cut(s) 123, 129, 135, 136, 179, 206, 207, 4267
NcoI CCATGG 1 cut(s) 2956
NdeI CATATG 4 cut(s) 1160, 4422, 5335, 5514
NheI GCTAGC 1 cut(s) 3925
NmeAIII GCCGAG 1 cut(s) 39
NmuCI GTSAC 5 cut(s) 869, 920, 1014, 3566, 5601
NsbI TGCGCA 1 cut(s) 4242
NsiI ATGCAT 2 cut(s) 1790, 5520
NspI RCATGY 5 cut(s) 1929, 2553, 2858, 3446, 5361
OliI CACNNNNGTG 1 cut(s) 2958
PaeI GCATGC 1 cut(s) 2858
PaeR7I CTCGAG 1 cut(s) 2169
PagI TCATGA 1 cut(s) 5218
PaqCI CACCTGC 2 cut(s) 3457, 5404
PceI AGGCCT 1 cut(s) 4146
PciI ACATGT 2 cut(s) 2549, 5357
PciSI GCTCTTC 2 cut(s) 1135, 2710
PctI GAATGC 3 cut(s) 343, 4787, 5135
PdmI GAANNNNTTC 1 cut(s) 1493
PflFI GACNNNGTC 1 cut(s) 5599
PflMI CCANNNNNTGG 2 cut(s) 2336, 3655
PfoI TCCNGGA 1 cut(s) 1882
PinAI ACCGGT 1 cut(s) 4394
PkrI GCNGC 9 cut(s) 213, 727, 1321, 2235, 2416, 2467, 2593, 2722, 4838
PleI GAGTC 7 cut(s) 899, 1278, 1715, 2013, 2494, 3481, 4717
PmaCI CACGTG 1 cut(s) 1934
PmlI CACGTG 1 cut(s) 1934
PpsI GAGTC 7 cut(s) 899, 1278, 1715, 2013, 2494, 3481, 4717
Ppu21I YACGTR 1 cut(s) 1934
PpuMI RGGWCCY 2 cut(s) 131, 4010
PscI ACATGT 2 cut(s) 2549, 5357
PshBI ATTAAT 1 cut(s) 1916
Psp124BI GAGCTC 1 cut(s) 167
Psp5II RGGWCCY 2 cut(s) 131, 4010
Psp6I CCWGG 9 cut(s) 167, 478, 1183, 1366, 1882, 2236, 3013, 3614, 4638
PspCI CACGTG 1 cut(s) 1934
PspFI CCCAGC 2 cut(s) 4335, 5417
PspGI CCWGG 9 cut(s) 167, 478, 1183, 1366, 1882, 2236, 3013, 3614, 4638
PspOMI GGGCCC 1 cut(s) 180
PspPPI RGGWCCY 2 cut(s) 131, 4010
PsrI GAACNNNNNNTAC 2 cut(s) 4206, 4238
PstI CTGCAG 3 cut(s) 739, 2397, 4021
PstNI CAGNNNCTG 4 cut(s) 1139, 3596, 3955, 4901
PsuI RGATCY 5 cut(s) 2339, 2389, 3047, 3691, 5245
PsyI GACNNNGTC 1 cut(s) 5599
PvuII CAGCTG 1 cut(s) 3824
RsaI GTAC 7 cut(s) 840, 1477, 1517, 1706, 2965, 3008, 4215
RsaNI GTAC 7 cut(s) 839, 1476, 1516, 1705, 2964, 3007, 4214
RseI CAYNNNNRTG 6 cut(s) 2799, 2958, 3385, 4425, 4917, 5338
Rsr2I CGGWCCG 1 cut(s) 4397
RsrII CGGWCCG 1 cut(s) 4397
SacI GAGCTC 1 cut(s) 167
SapI GCTCTTC 2 cut(s) 1135, 2710
SatI GCNGC 9 cut(s) 212, 726, 1320, 2234, 2415, 2466, 2592, 2721, 4837
ScaI AGTACT 1 cut(s) 1517
SchI GAGTC 7 cut(s) 900, 1279, 1715, 2013, 2495, 3482, 4718
SduI GDGCHC 7 cut(s) 167, 175, 184, 704, 1429, 1933, 4488
SfcI CTRYAG 5 cut(s) 735, 2393, 3126, 4017, 4947
Sfr274I CTCGAG 1 cut(s) 2169
SinI GGWCC 6 cut(s) 131, 1208, 2790, 4010, 4031, 4397
SlaI CTCGAG 1 cut(s) 2169
SmaI CCCGGG 2 cut(s) 136, 207
SmiMI CAYNNNNRTG 6 cut(s) 2799, 2958, 3385, 4425, 4917, 5338
SmlI CTYRAG 5 cut(s) 2169, 2348, 2409, 4226, 5023
SmoI CTYRAG 5 cut(s) 2169, 2348, 2409, 4226, 5023
SphI GCATGC 1 cut(s) 2858
SseBI AGGCCT 1 cut(s) 4146
SspI AATATT 4 cut(s) 1083, 2061, 3177, 4111
SstI GAGCTC 1 cut(s) 167
StuI AGGCCT 1 cut(s) 4146
StyI CCWWGG 2 cut(s) 2956, 4034
TaiI ACGT 7 cut(s) 1201, 1660, 1936, 3008, 4548, 4768, 4956
TaqI TCGA 8 cut(s) 320, 332, 470, 1678, 2170, 2354, 5494, 5553
TaqII GACCGA 1 cut(s) 3576
TatI WGTACW 3 cut(s) 1475, 1515, 1704
TauI GCSGC 3 cut(s) 214, 1322, 2236
TseFI GTSAC 5 cut(s) 869, 920, 1014, 3566, 5601
TseI GCWGC 6 cut(s) 725, 2414, 2465, 2591, 2720, 4836
Tsp45I GTSAC 5 cut(s) 869, 920, 1014, 3566, 5601
TspGWI ACGGA 5 cut(s) 1033, 2332, 2937, 3162, 4231
TspMI CCCGGG 2 cut(s) 134, 205
Tth111I GACNNNGTC 1 cut(s) 5599
Van91I CCANNNNNTGG 2 cut(s) 2336, 3655
Vha464I CTTAAG 1 cut(s) 2348
VneI GTGCAC 3 cut(s) 700, 1425, 1929
VpaK11BI GGWCC 6 cut(s) 131, 1208, 2790, 4010, 4031, 4397
VspI ATTAAT 1 cut(s) 1916
XagI CCTNNNNNAGG 3 cut(s) 1857, 1887, 2758
XbaI TCTAGA 1 cut(s) 2093
XceI RCATGY 5 cut(s) 1929, 2553, 2858, 3446, 5361
XhoI CTCGAG 1 cut(s) 2169
XmaI CCCGGG 2 cut(s) 134, 205
XmiI GTMKAC 3 cut(s) 2135, 4909, 4950
XmnI GAANNNNTTC 1 cut(s) 1493
ZraI GACGTC 2 cut(s) 1199, 4954
ZrmI AGTACT 1 cut(s) 1517
Zsp2I ATGCAT 2 cut(s) 1790, 5520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.