Rmu_sc0001035.1_g000052

Protein phosphatase 1 regulatory subunit

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001035.1
Physical Location & Seq
Forward (+)
247155 .. 254311
7157 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001035.1_g000052.1.cds

Sequence Viewer

Length: 1407 bp
atggtaaataacttatgtaatttactagttcccaaccctaaacccggggagccggatgaagttaccgggctgaaaatatttgccgcccccaagcaaactgcgaaagcaaaaccagagcgcagcaaaactagagccaaaagcgcaagcatgaagcggttgagcttggaccaggtgctcaaggacaacaacactcgcgaccccaactccatttcttctctcatcctcactcacagggctctctccgatgtttcgtgcttgggcgagctcaagaatctggagcggctcgatctcagcgccaacacgctcacttcgcttgaggggttgaagtcatgcgccaatctgaaatggctatctgtttctcaaaataaactgcaaagcctcaagggaattgaaggactttctaagctcactgtaattctttctaaaaatccgattcgtgatattggtgatgctttgatgaatgtcaaatctatcagaaagctttctctttctcactgccaacttcggagtatacagtcttcgctcaagtcatgtgttgaactgaaagagctgcggctcgctcacaataatattgagggtctccctgctgagttggctcataataagggactccagaatctggatctggggaataatgtgatcacaagatggtcggagctgaaggtgcttgattccttggtcaatctgaagaatctcaatctgcaaggaaaccctgtagctgaaaaggataaattagcaaagaagattaaaaagatattgccgaacctgcatgttttcaatgcaagaccaatagataaatacaccaagaatgagaagggtgcccgggttgatgcagttgatgaagaaaaatatagagattcaaaacatcaagggttgggtgaagcgaaggacagtaaccttgataatgctagagaattggatatgaagaggaaatggaatagggagaaagcaaatgagaatgtcttggaccaggaagttttggtccaggaggatgaagaaggggatagcatcaagaaaaagaagagacatcaggttgtaaatgaagattttagtaatcttgaagatgctgctgatttggaggaatcaaagggaaagaaactgaaaaagaaaggccataaagatgatgatacgaaggttaaaaagaaactagataaggtgaagcaacaaagtgaacttgatattattgatgatgcagacactccatttttggagctcttttctgatgacaaagtggtagatggtggggatgacggcgaacaaagtaaagacaaggctagtcacacaaaattgtcaagtggagtagtaaccctcacttcaagtaaagctaagaagcggagcacaggttctactttaccgctgttgcctgtagatgaaattggagcgggtgggccatcaacatgggactga

Protein Analysis

468

Amino Acids

51.87

Weight (kDa)

8.98

Isoelectric Point (pI)

36.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 774
AccB1I GGYRCC 1 cut(s) 818
AccB7I CCANNNNNTGG 1 cut(s) 619
AccBSI CCGCTC 2 cut(s) 280, 1382
AccI GTMKAC 1 cut(s) 511
AccII CGCG 1 cut(s) 195
AciI CCGC 7 cut(s) 84, 154, 280, 553, 1333, 1355, 1382
AclWI GGATC 1 cut(s) 630
AcuI CTGAAG 2 cut(s) 680, 707
AfiI CCNNNNNNNGG 2 cut(s) 44, 619
AgsI TTSAA 7 cut(s) 325, 392, 539, 778, 861, 1061, 1317
AhlI ACTAGT 1 cut(s) 25
AjnI CCWGG 3 cut(s) 168, 969, 984
AloI GAACNNNNNNTCC 2 cut(s) 1327, 1359
AluBI AGCT 9 cut(s) 162, 265, 406, 481, 550, 658, 719, 1213, 1325
AluI AGCT 9 cut(s) 162, 265, 406, 481, 550, 658, 719, 1213, 1325
Alw21I GWGCWC 4 cut(s) 177, 267, 1215, 1340
Alw26I GTCTC 2 cut(s) 584, 1018
AlwI GGATC 1 cut(s) 630
AlwNI CAGNNNCTG 1 cut(s) 619
Ama87I CYCGRG 2 cut(s) 44, 822
AoxI GGCC 2 cut(s) 1111, 1388
ApeKI GCWGC 3 cut(s) 120, 550, 1067
Asp700I GAANNNNTTC 1 cut(s) 481
AspLEI GCGC 4 cut(s) 120, 143, 296, 335
AspS9I GGNCC 4 cut(s) 166, 967, 982, 1388
AsuC2I CCSGG 5 cut(s) 45, 46, 67, 823, 824
AsuHPI GGTGA 3 cut(s) 458, 890, 1168
AvaI CYCGRG 2 cut(s) 44, 822
AvaII GGWCC 3 cut(s) 166, 967, 982
BaeGI GKGCMC 1 cut(s) 823
BaeI ACNNNNGTAYC 2 cut(s) 1119, 1152
BanI GGYRCC 1 cut(s) 818
BanII GRGCYC 3 cut(s) 238, 267, 1215
BarI GAAGNNNNNNTAC 2 cut(s) 502, 534
BbsI GAAGAC 1 cut(s) 510
Bbv12I GWGCWC 4 cut(s) 177, 267, 1215, 1340
BbvI GCAGC 3 cut(s) 132, 537, 1054
BccI CCATC 3 cut(s) 642, 1232, 1399
BceAI ACGGC 1 cut(s) 1267
BciT130I CCWGG 3 cut(s) 170, 971, 986
BclI TGATCA 1 cut(s) 639
BcnI CCSGG 5 cut(s) 45, 46, 67, 823, 824
BcoDI GTCTC 2 cut(s) 584, 1018
BcuI ACTAGT 1 cut(s) 25
BfaI CTAG 5 cut(s) 26, 129, 909, 1148, 1275
BfmI CTRYAG 2 cut(s) 714, 1365
BfoI RGCGCY 1 cut(s) 297
BfuAI ACCTGC 1 cut(s) 774
BisI GCNGC 6 cut(s) 84, 121, 281, 551, 554, 1068
BlsI GCNGC 6 cut(s) 85, 122, 282, 552, 555, 1069
Bme1390I CCNGG 8 cut(s) 45, 46, 67, 170, 823, 824, 971, 986
Bme18I GGWCC 3 cut(s) 166, 967, 982
BmeT110I CYCGRG 2 cut(s) 44, 822
BmgT120I GGNCC 4 cut(s) 166, 967, 982, 1388
BmiI GGNNCC 2 cut(s) 51, 820
BmrFI CCNGG 8 cut(s) 45, 46, 67, 170, 823, 824, 971, 986
BmsI GCATC 5 cut(s) 439, 820, 1017, 1054, 1180
BpiI GAAGAC 1 cut(s) 510
BpmI CTGGAG 2 cut(s) 296, 596
BpuEI CTTGAG 5 cut(s) 161, 251, 335, 365, 509
BpuMI CCSGG 5 cut(s) 45, 46, 67, 823, 824
BsaI GGTCTC 1 cut(s) 584
BsaJI CCNNGG 4 cut(s) 44, 45, 675, 822
BsaXI ACNNNNNCTCC 4 cut(s) 188, 218, 1327, 1357
Bsc4I CCNNNNNNNGG 2 cut(s) 44, 619
BseBI CCWGG 3 cut(s) 170, 971, 986
BseDI CCNNGG 4 cut(s) 44, 45, 675, 822
BseGI GGATG 4 cut(s) 61, 219, 997, 1252
BseLI CCNNNNNNNGG 2 cut(s) 44, 619
BseMII CTCAG 2 cut(s) 304, 579
BseSI GKGCMC 1 cut(s) 823
BseXI GCAGC 3 cut(s) 132, 537, 1054
Bsh1236I CGCG 1 cut(s) 195
BshFI GGCC 2 cut(s) 1113, 1390
BshNI GGYRCC 1 cut(s) 818
BsiHKAI GWGCWC 4 cut(s) 177, 267, 1215, 1340
BsiHKCI CYCGRG 2 cut(s) 44, 822
BsiSI CCGG 4 cut(s) 45, 53, 66, 823
BslFI GGGAC 1 cut(s) 621
BslI CCNNNNNNNGG 2 cut(s) 44, 619
BsmAI GTCTC 2 cut(s) 584, 1018
BsmFI GGGAC 1 cut(s) 621
BsnI GGCC 2 cut(s) 1113, 1390
Bso31I GGTCTC 1 cut(s) 584
BsoBI CYCGRG 2 cut(s) 44, 822
Bsp1286I GDGCHC 6 cut(s) 177, 238, 267, 823, 1215, 1340
Bsp143I GATC 3 cut(s) 286, 622, 639
Bsp68I TCGCGA 1 cut(s) 195
BspACI CCGC 7 cut(s) 84, 154, 280, 553, 1333, 1355, 1382
BspANI GGCC 2 cut(s) 1113, 1390
BspCNI CTCAG 2 cut(s) 303, 580
BspFNI CGCG 1 cut(s) 195
BspLI GGNNCC 2 cut(s) 51, 820
BspMI ACCTGC 1 cut(s) 774
BspPI GGATC 1 cut(s) 630
BspT107I GGYRCC 1 cut(s) 818
BspTNI GGTCTC 1 cut(s) 584
BsrBI CCGCTC 2 cut(s) 280, 1382
BssECI CCNNGG 4 cut(s) 44, 45, 675, 822
BssMI GATC 3 cut(s) 286, 622, 639
BssNAI GTATAC 1 cut(s) 512
BssT1I CCWWGG 1 cut(s) 675
Bst1107I GTATAC 1 cut(s) 512
Bst2UI CCWGG 3 cut(s) 170, 971, 986
Bst4CI ACNGT 3 cut(s) 412, 516, 893
Bst6I CTCTTC 2 cut(s) 920, 1016
BstC8I GCNNGC 3 cut(s) 145, 263, 558
BstDEI CTNAG 4 cut(s) 290, 402, 588, 1326
BstF5I GGATG 4 cut(s) 61, 219, 997, 1252
BstFNI CGCG 1 cut(s) 195
BstH2I RGCGCY 1 cut(s) 297
BstHHI GCGC 4 cut(s) 120, 143, 296, 335
BstKTI GATC 3 cut(s) 289, 625, 642
BstMAI GTCTC 2 cut(s) 584, 1018
BstMBI GATC 3 cut(s) 286, 622, 639
BstMWI GCNNNNNNNGC 5 cut(s) 140, 310, 593, 664, 766
BstNI CCWGG 3 cut(s) 170, 971, 986
BstNSI RCATGY 1 cut(s) 773
BstSCI CCNGG 8 cut(s) 43, 44, 65, 168, 821, 822, 969, 984
BstSFI CTRYAG 2 cut(s) 714, 1365
BstSLI GKGCMC 1 cut(s) 823
BstUI CGCG 1 cut(s) 195
BstV1I GCAGC 3 cut(s) 132, 537, 1054
BstV2I GAAGAC 1 cut(s) 510
BstX2I RGATCY 1 cut(s) 622
BstXI CCANNNNNNTGG 1 cut(s) 1398
BstYI RGATCY 1 cut(s) 622
BstZ17I GTATAC 1 cut(s) 512
BsuRI GGCC 2 cut(s) 1113, 1390
BtsCI GGATG 4 cut(s) 61, 219, 997, 1252
BtsI GCAGTG 1 cut(s) 493
BtsIMutI CAGTG 2 cut(s) 408, 493
BtuMI TCGCGA 1 cut(s) 195
BveI ACCTGC 1 cut(s) 774
Cac8I GCNNGC 3 cut(s) 145, 263, 558
CaiI CAGNNNCTG 1 cut(s) 619
CfoI GCGC 4 cut(s) 120, 143, 296, 335
Cfr13I GGNCC 4 cut(s) 166, 967, 982, 1388
Cfr9I CCCGGG 2 cut(s) 44, 822
CsiI ACCWGGT 1 cut(s) 168
CviAII CATG 5 cut(s) 148, 330, 531, 770, 1398
DdeI CTNAG 4 cut(s) 290, 402, 588, 1326
DpnI GATC 3 cut(s) 288, 624, 641
DpnII GATC 3 cut(s) 286, 622, 639
Eam1104I CTCTTC 2 cut(s) 920, 1016
EarI CTCTTC 2 cut(s) 920, 1016
Ecl136II GAGCTC 2 cut(s) 265, 1213
Eco130I CCWWGG 1 cut(s) 675
Eco24I GRGCYC 3 cut(s) 238, 267, 1215
Eco31I GGTCTC 1 cut(s) 584
Eco47I GGWCC 3 cut(s) 166, 967, 982
Eco53kI GAGCTC 2 cut(s) 265, 1213
Eco57I CTGAAG 2 cut(s) 680, 707
Eco88I CYCGRG 2 cut(s) 44, 822
EcoICRI GAGCTC 2 cut(s) 265, 1213
EcoRII CCWGG 3 cut(s) 168, 969, 984
EcoT14I CCWWGG 1 cut(s) 675
EcoT38I GRGCYC 3 cut(s) 238, 267, 1215
ErhI CCWWGG 1 cut(s) 675
FaeI CATG 5 cut(s) 151, 333, 534, 773, 1401
FaqI GGGAC 1 cut(s) 621
FatI CATG 5 cut(s) 147, 329, 530, 769, 1397
FauI CCCGC 1 cut(s) 1375
FbaI TGATCA 1 cut(s) 639
FblI GTMKAC 1 cut(s) 511
Fnu4HI GCNGC 6 cut(s) 84, 121, 281, 551, 554, 1068
FokI GGATG 4 cut(s) 68, 206, 1004, 1259
FriOI GRGCYC 3 cut(s) 238, 267, 1215
Fsp4HI GCNGC 6 cut(s) 84, 121, 281, 551, 554, 1068
FspBI CTAG 5 cut(s) 26, 129, 909, 1148, 1275
GlaI GCGC 4 cut(s) 119, 142, 295, 334
GluI GCNGC 6 cut(s) 84, 121, 281, 551, 554, 1068
GsuI CTGGAG 2 cut(s) 296, 596
HaeII RGCGCY 1 cut(s) 297
HaeIII GGCC 2 cut(s) 1113, 1390
HapII CCGG 4 cut(s) 45, 53, 66, 823
HhaI GCGC 4 cut(s) 120, 143, 296, 335
Hin1II CATG 5 cut(s) 151, 333, 534, 773, 1401
Hin6I GCGC 4 cut(s) 118, 141, 294, 333
HinP1I GCGC 4 cut(s) 118, 141, 294, 333
HindIII AAGCTT 1 cut(s) 479
HinfI GANTC 8 cut(s) 271, 433, 609, 616, 671, 691, 857, 1082
HpaII CCGG 4 cut(s) 45, 53, 66, 823
HphI GGTGA 3 cut(s) 458, 890, 1168
Hpy166II GTNNAC 2 cut(s) 512, 1172
Hpy188I TCNGA 8 cut(s) 244, 342, 432, 476, 507, 655, 687, 1222
Hpy188III TCNNGA 8 cut(s) 194, 268, 275, 437, 613, 620, 1012, 1058
Hpy8I GTNNAC 2 cut(s) 512, 1172
HpyAV CCTTC 6 cut(s) 386, 655, 808, 880, 992, 1126
HpyCH4III ACNGT 3 cut(s) 412, 516, 893
HpyCH4V TGCA 6 cut(s) 373, 703, 769, 782, 833, 1193
HpyF10VI GCNNNNNNNGC 5 cut(s) 140, 310, 593, 664, 766
HpyF3I CTNAG 4 cut(s) 290, 402, 588, 1326
Hsp92II CATG 5 cut(s) 151, 333, 534, 773, 1401
HspAI GCGC 4 cut(s) 118, 141, 294, 333
Ksp22I TGATCA 1 cut(s) 639
Kzo9I GATC 3 cut(s) 286, 622, 639
LmnI GCTCC 6 cut(s) 49, 277, 655, 1210, 1335, 1379
Lsp1109I GCAGC 3 cut(s) 132, 537, 1054
LweI GCATC 5 cut(s) 439, 820, 1017, 1054, 1180
MabI ACCWGGT 1 cut(s) 168
MaeI CTAG 5 cut(s) 26, 129, 909, 1148, 1275
MaeIII GTNAC 4 cut(s) 61, 893, 1277, 1303
MalI GATC 3 cut(s) 288, 624, 641
MbiI CCGCTC 2 cut(s) 280, 1382
MboI GATC 3 cut(s) 286, 622, 639
MflI RGATCY 1 cut(s) 622
MhlI GDGCHC 6 cut(s) 177, 238, 267, 823, 1215, 1340
MluCI AATT 7 cut(s) 19, 387, 414, 731, 914, 1286, 1374
MlyI GAGTC 1 cut(s) 603
MmeI TCCRAC 1 cut(s) 633
MnlI CCTC 8 cut(s) 233, 310, 389, 568, 921, 982, 1072, 1319
MroXI GAANNNNTTC 1 cut(s) 481
MseI TTAA 2 cut(s) 747, 1137
MslI CAYNNNNRTG 2 cut(s) 1119, 1396
MspA1I CMGCKG 1 cut(s) 1357
MspI CCGG 4 cut(s) 45, 53, 66, 823
MspR9I CCNGG 8 cut(s) 45, 46, 67, 170, 823, 824, 971, 986
MvaI CCWGG 3 cut(s) 170, 971, 986
MvnI CGCG 1 cut(s) 195
MwoI GCNNNNNNNGC 5 cut(s) 140, 310, 593, 664, 766
NciI CCSGG 5 cut(s) 45, 46, 67, 823, 824
NdeII GATC 3 cut(s) 286, 622, 639
NlaIII CATG 5 cut(s) 151, 333, 534, 773, 1401
NlaIV GGNNCC 2 cut(s) 51, 820
NmuCI GTSAC 1 cut(s) 1277
NruI TCGCGA 1 cut(s) 195
NspI RCATGY 1 cut(s) 773
PdmI GAANNNNTTC 1 cut(s) 481
PfeI GAWTC 7 cut(s) 271, 433, 616, 671, 691, 857, 1082
PflMI CCANNNNNTGG 1 cut(s) 619
PfoI TCCNGGA 1 cut(s) 984
PkrI GCNGC 6 cut(s) 85, 122, 282, 552, 555, 1069
PleI GAGTC 1 cut(s) 603
PpsI GAGTC 1 cut(s) 603
Psp124BI GAGCTC 2 cut(s) 267, 1215
Psp6I CCWGG 3 cut(s) 168, 969, 984
PspGI CCWGG 3 cut(s) 168, 969, 984
PspN4I GGNNCC 2 cut(s) 51, 820
PspPI GGNCC 4 cut(s) 166, 967, 982, 1388
PstNI CAGNNNCTG 1 cut(s) 619
PsuI RGATCY 1 cut(s) 622
RruI TCGCGA 1 cut(s) 195
RseI CAYNNNNRTG 2 cut(s) 1119, 1396
SacI GAGCTC 2 cut(s) 267, 1215
SaqAI TTAA 2 cut(s) 747, 1137
SatI GCNGC 6 cut(s) 84, 121, 281, 551, 554, 1068
Sau3AI GATC 3 cut(s) 286, 622, 639
Sau96I GGNCC 4 cut(s) 166, 967, 982, 1388
SchI GAGTC 1 cut(s) 603
ScrFI CCNGG 8 cut(s) 45, 46, 67, 170, 823, 824, 971, 986
SduI GDGCHC 6 cut(s) 177, 238, 267, 823, 1215, 1340
SexAI ACCWGGT 1 cut(s) 168
SfaNI GCATC 5 cut(s) 439, 820, 1017, 1054, 1180
SfcI CTRYAG 2 cut(s) 714, 1365
SinI GGWCC 3 cut(s) 166, 967, 982
SmaI CCCGGG 2 cut(s) 46, 824
SmiMI CAYNNNNRTG 2 cut(s) 1119, 1396
SmlI CTYRAG 5 cut(s) 176, 266, 314, 380, 524
SmoI CTYRAG 5 cut(s) 176, 266, 314, 380, 524
SpeI ACTAGT 1 cut(s) 25
Sse9I AATT 7 cut(s) 19, 387, 414, 731, 914, 1286, 1374
SsiI CCGC 7 cut(s) 84, 154, 280, 553, 1333, 1355, 1382
SspI AATATT 2 cut(s) 78, 571
SspMI CTAG 5 cut(s) 26, 129, 909, 1148, 1275
SstI GAGCTC 2 cut(s) 267, 1215
StyD4I CCNGG 8 cut(s) 43, 44, 65, 168, 821, 822, 969, 984
StyI CCWWGG 1 cut(s) 675
TaaI ACNGT 3 cut(s) 412, 516, 893
TaqI TCGA 1 cut(s) 285
TasI AATT 7 cut(s) 19, 387, 414, 731, 914, 1286, 1374
TauI GCSGC 3 cut(s) 86, 283, 556
TfiI GAWTC 7 cut(s) 271, 433, 616, 671, 691, 857, 1082
Tru1I TTAA 2 cut(s) 747, 1137
Tru9I TTAA 2 cut(s) 747, 1137
TscAI CASTG 2 cut(s) 415, 500
TseFI GTSAC 1 cut(s) 1277
TseI GCWGC 3 cut(s) 120, 550, 1067
Tsp45I GTSAC 1 cut(s) 1277
TspDTI ATGAA 8 cut(s) 72, 164, 473, 855, 938, 1008, 1056, 1386
TspMI CCCGGG 2 cut(s) 44, 822
TspRI CASTG 2 cut(s) 415, 500
Van91I CCANNNNNTGG 1 cut(s) 619
VpaK11BI GGWCC 3 cut(s) 166, 967, 982
XceI RCATGY 1 cut(s) 773
XmaI CCCGGG 2 cut(s) 44, 822
XmiI GTMKAC 1 cut(s) 511
XmnI GAANNNNTTC 1 cut(s) 481
XspI CTAG 5 cut(s) 26, 129, 909, 1148, 1275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.