Rh5CG341300

Protein phosphatase 1 regulatory subunit

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
39113198 .. 39120065
6868 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG341300.1

Sequence Viewer

Length: 1395 bp
ATGAAGCGGTTGAGCTTGGACCAGGTGCTCAAGGACAACAACACTCGCGACCCCAACTCCATTTCTTCTCTCATCCTCACTCACAGGGCTCTCTCCGATGTTTCGTGCTTGGGCGAGCTCAAGAATCTGGAGAGGCTCGATCTCAGCGCCAACACGCTCACTTCGCTTGAGGGGTTGAAGTCATGCGTCAATCTGAAATGGCTATCTGTTTCTCAAAATAAACTGCAAAGCCTCAAGGGAATTGAAGGACTTTCTAAGCTCACTGTGTTAAATGCAGGCAACAATAAGCTTACAGTGATGGATGAAGTCAAGTCTATTGTGAGTTTGCGCGCATTAATTTTGAATGATAATGAGATTGCTTCGATTTGCAGACTTGAACAGATGAAAGAGTTGAACACTCTTGTTCTTTCTAAAAATCCGATTCGTGATATTGGTGATTCTTTGATTAATGTCAAATCTATCAAAAAGCTTTCTCTTTCTCACTGCCAACTTCGGAGTTTACAGTCTTCGCTCAAGTCATGTGTTGAACTGAAAGAGCTGCGGCTCGCTCACAATAATATTGAGGGTCTCCCTGCTGAGTTGGCTCATAATAAGGGACTCCAGAATCTGGATCTGGGGAATAATGTGATCACAAGATGGTCGGAGCTGAAGGTGCTTGATTCCTTGGTCTATCTGAAGAATCTCAATCTGCAAGGAAACCCTGTAGCTGAAAAGGATAAATTAGCAAAGAAGATTAAAAAGATGTTGCCGAACCTGCATGTTTTCAATGCAAGACCAATAGATAAATACACCAAGAATGAGAAGGGTGCCCGGGTTAATGCAGTTGATGAAGAAAAATATAGAGATTCAAAACATCAAGGGTTGGGTGAAACGAAGGATAGTAACCTTGATAATGCTAGAGAATTGGATATGAAGAGGAAACGGAATAGGGAGAAAGCAAATGAGAATGTCTCGGACCAGGAAGTTTTGGTCCAGGAGGATGAAGAAGGGGATAGCATCAAGAAAAAGAAGAGACATCAGGTTGTAAATGAAGATTTTAGTAATCTTGAAGATGCTGCTGATTTGGAGGAATCAAAGGGAAAGAAACTGAAAAAGAAAGGCCATAAAGATGATGATATGAAGGTTAAAAAGAAACTAGATAAGGTGAAGCAACAAAGTGAACTTGATATTCTTGATGACGCAGACACTCCATTTTTGGAGCTTTTTTCTGATGACAAAGTGGTGGATGCTGAGGATGATGGCGAACAAAGTAAGGACAAGGCTAGTCACACAAAATTGTCGAGTGGTGTAGTGACCATCACTTCAAGTAAAGCTAAGAAGCGGAGCACAGGTTCTACTTTACCGCTGTTGCCTGTAGATGAAATTGGAGTGGGTGGGCCATCAACATGGGACTGA

Protein Analysis

464

Amino Acids

51.82

Weight (kDa)

8.49

Isoelectric Point (pI)

38.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 176 - 234 1.6e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 762
AccB1I GGYRCC 1 cut(s) 806
AccB7I CCANNNNNTGG 1 cut(s) 607
AccII CGCG 2 cut(s) 48, 330
AciI CCGC 4 cut(s) 7, 541, 1321, 1343
AclWI GGATC 1 cut(s) 618
AcuI CTGAAG 2 cut(s) 668, 695
AfiI CCNNNNNNNGG 1 cut(s) 607
AjnI CCWGG 3 cut(s) 21, 957, 972
AloI GAACNNNNNNTCC 2 cut(s) 1315, 1347
Alw21I GWGCWC 3 cut(s) 30, 120, 1328
Alw26I GTCTC 3 cut(s) 572, 955, 1006
AlwI GGATC 1 cut(s) 618
AlwNI CAGNNNCTG 1 cut(s) 607
Ama87I CYCGRG 1 cut(s) 810
AoxI GGCC 2 cut(s) 1099, 1376
ApeKI GCWGC 2 cut(s) 538, 1055
AseI ATTAAT 2 cut(s) 335, 447
AspLEI GCGC 3 cut(s) 149, 330, 332
AspS9I GGNCC 4 cut(s) 19, 955, 970, 1376
AsuC2I CCSGG 2 cut(s) 811, 812
AsuHPI GGTGA 3 cut(s) 446, 878, 1156
AvaI CYCGRG 1 cut(s) 810
AvaII GGWCC 3 cut(s) 19, 955, 970
BaeGI GKGCMC 1 cut(s) 811
BanI GGYRCC 1 cut(s) 806
BanII GRGCYC 2 cut(s) 91, 120
BbsI GAAGAC 1 cut(s) 498
Bbv12I GWGCWC 3 cut(s) 30, 120, 1328
BbvCI CCTCAGC 1 cut(s) 1230
BbvI GCAGC 2 cut(s) 525, 1042
BccI CCATC 5 cut(s) 292, 630, 1232, 1304, 1387
BciT130I CCWGG 3 cut(s) 23, 959, 974
BclI TGATCA 1 cut(s) 627
BcnI CCSGG 2 cut(s) 811, 812
BcoDI GTCTC 3 cut(s) 572, 955, 1006
BfaI CTAG 3 cut(s) 897, 1136, 1263
BfmI CTRYAG 2 cut(s) 702, 1353
BfoI RGCGCY 1 cut(s) 150
BfuAI ACCTGC 1 cut(s) 762
BisI GCNGC 3 cut(s) 539, 542, 1056
BlsI GCNGC 3 cut(s) 540, 543, 1057
Bme1390I CCNGG 5 cut(s) 23, 811, 812, 959, 974
Bme18I GGWCC 3 cut(s) 19, 955, 970
BmeT110I CYCGRG 1 cut(s) 810
BmgT120I GGNCC 4 cut(s) 19, 955, 970, 1376
BmiI GGNNCC 1 cut(s) 808
BmrFI CCNGG 5 cut(s) 23, 811, 812, 959, 974
BmsI GCATC 3 cut(s) 1005, 1042, 1216
BpiI GAAGAC 1 cut(s) 498
BplI GAGNNNNNCTC 2 cut(s) 935, 967
BpmI CTGGAG 2 cut(s) 149, 584
Bpu10I CCTNAGC 1 cut(s) 1230
BpuEI CTTGAG 5 cut(s) 14, 104, 188, 218, 497
BpuMI CCSGG 2 cut(s) 811, 812
BsaI GGTCTC 1 cut(s) 572
BsaJI CCNNGG 2 cut(s) 663, 810
BsaXI ACNNNNNCTCC 4 cut(s) 41, 71, 1315, 1345
Bsc4I CCNNNNNNNGG 1 cut(s) 607
BseBI CCWGG 3 cut(s) 23, 959, 974
BseDI CCNNGG 2 cut(s) 663, 810
BseGI GGATG 5 cut(s) 72, 307, 985, 1231, 1240
BseLI CCNNNNNNNGG 1 cut(s) 607
BseMII CTCAG 3 cut(s) 157, 567, 1221
BsePI GCGCGC 1 cut(s) 328
BseSI GKGCMC 1 cut(s) 811
BseXI GCAGC 2 cut(s) 525, 1042
Bsh1236I CGCG 2 cut(s) 48, 330
BshFI GGCC 2 cut(s) 1101, 1378
BshNI GGYRCC 1 cut(s) 806
BsiHKAI GWGCWC 3 cut(s) 30, 120, 1328
BsiHKCI CYCGRG 1 cut(s) 810
BsiSI CCGG 1 cut(s) 811
BslFI GGGAC 1 cut(s) 609
BslI CCNNNNNNNGG 1 cut(s) 607
BsmAI GTCTC 3 cut(s) 572, 955, 1006
BsmFI GGGAC 1 cut(s) 609
BsnI GGCC 2 cut(s) 1101, 1378
Bso31I GGTCTC 1 cut(s) 572
BsoBI CYCGRG 1 cut(s) 810
Bsp1286I GDGCHC 5 cut(s) 30, 91, 120, 811, 1328
Bsp143I GATC 3 cut(s) 139, 610, 627
Bsp68I TCGCGA 1 cut(s) 48
BspACI CCGC 4 cut(s) 7, 541, 1321, 1343
BspANI GGCC 2 cut(s) 1101, 1378
BspCNI CTCAG 3 cut(s) 156, 568, 1222
BspFNI CGCG 2 cut(s) 48, 330
BspLI GGNNCC 1 cut(s) 808
BspMI ACCTGC 1 cut(s) 762
BspPI GGATC 1 cut(s) 618
BspT107I GGYRCC 1 cut(s) 806
BspTNI GGTCTC 1 cut(s) 572
BssECI CCNNGG 2 cut(s) 663, 810
BssHII GCGCGC 1 cut(s) 328
BssMI GATC 3 cut(s) 139, 610, 627
BssT1I CCWWGG 1 cut(s) 663
Bst2UI CCWGG 3 cut(s) 23, 959, 974
Bst4CI ACNGT 3 cut(s) 265, 295, 504
Bst6I CTCTTC 2 cut(s) 908, 1004
BstC8I GCNNGC 4 cut(s) 116, 277, 330, 546
BstDEI CTNAG 5 cut(s) 143, 255, 576, 1230, 1314
BstF5I GGATG 5 cut(s) 72, 307, 985, 1231, 1240
BstFNI CGCG 2 cut(s) 48, 330
BstH2I RGCGCY 1 cut(s) 150
BstHHI GCGC 3 cut(s) 149, 330, 332
BstKTI GATC 3 cut(s) 142, 613, 630
BstMAI GTCTC 3 cut(s) 572, 955, 1006
BstMBI GATC 3 cut(s) 139, 610, 627
BstMWI GCNNNNNNNGC 4 cut(s) 163, 581, 652, 754
BstNI CCWGG 3 cut(s) 23, 959, 974
BstNSI RCATGY 1 cut(s) 761
BstSCI CCNGG 5 cut(s) 21, 809, 810, 957, 972
BstSFI CTRYAG 2 cut(s) 702, 1353
BstSLI GKGCMC 1 cut(s) 811
BstUI CGCG 2 cut(s) 48, 330
BstV1I GCAGC 2 cut(s) 525, 1042
BstV2I GAAGAC 1 cut(s) 498
BstX2I RGATCY 1 cut(s) 610
BstXI CCANNNNNNTGG 1 cut(s) 1386
BstYI RGATCY 1 cut(s) 610
BsuRI GGCC 2 cut(s) 1101, 1378
BtsCI GGATG 5 cut(s) 72, 307, 985, 1231, 1240
BtsI GCAGTG 1 cut(s) 481
BtsIMutI CAGTG 3 cut(s) 261, 300, 481
BtuMI TCGCGA 1 cut(s) 48
BveI ACCTGC 1 cut(s) 762
Cac8I GCNNGC 4 cut(s) 116, 277, 330, 546
CaiI CAGNNNCTG 1 cut(s) 607
CfoI GCGC 3 cut(s) 149, 330, 332
Cfr13I GGNCC 4 cut(s) 19, 955, 970, 1376
Cfr9I CCCGGG 1 cut(s) 810
CseI GACGC 2 cut(s) 175, 1187
CsiI ACCWGGT 1 cut(s) 21
CviAII CATG 4 cut(s) 183, 519, 758, 1386
DdeI CTNAG 5 cut(s) 143, 255, 576, 1230, 1314
DpnI GATC 3 cut(s) 141, 612, 629
DpnII GATC 3 cut(s) 139, 610, 627
Eam1104I CTCTTC 2 cut(s) 908, 1004
EarI CTCTTC 2 cut(s) 908, 1004
Ecl136II GAGCTC 1 cut(s) 118
Eco130I CCWWGG 1 cut(s) 663
Eco24I GRGCYC 2 cut(s) 91, 120
Eco31I GGTCTC 1 cut(s) 572
Eco47I GGWCC 3 cut(s) 19, 955, 970
Eco53kI GAGCTC 1 cut(s) 118
Eco57I CTGAAG 2 cut(s) 668, 695
Eco88I CYCGRG 1 cut(s) 810
EcoICRI GAGCTC 1 cut(s) 118
EcoRII CCWGG 3 cut(s) 21, 957, 972
EcoT14I CCWWGG 1 cut(s) 663
EcoT38I GRGCYC 2 cut(s) 91, 120
ErhI CCWWGG 1 cut(s) 663
FaeI CATG 4 cut(s) 186, 522, 761, 1389
FaiI YATR 9 cut(s) 184, 520, 588, 759, 840, 911, 1104, 1118, 1387
FaqI GGGAC 1 cut(s) 609
FatI CATG 4 cut(s) 182, 518, 757, 1385
FbaI TGATCA 1 cut(s) 627
Fnu4HI GCNGC 3 cut(s) 539, 542, 1056
FokI GGATG 5 cut(s) 59, 314, 992, 1238, 1247
FriOI GRGCYC 2 cut(s) 91, 120
Fsp4HI GCNGC 3 cut(s) 539, 542, 1056
FspBI CTAG 3 cut(s) 897, 1136, 1263
GlaI GCGC 3 cut(s) 148, 329, 331
GluI GCNGC 3 cut(s) 539, 542, 1056
GsuI CTGGAG 2 cut(s) 149, 584
HaeII RGCGCY 1 cut(s) 150
HaeIII GGCC 2 cut(s) 1101, 1378
HapII CCGG 1 cut(s) 811
HgaI GACGC 2 cut(s) 175, 1187
HhaI GCGC 3 cut(s) 149, 330, 332
Hin1II CATG 4 cut(s) 186, 522, 761, 1389
Hin6I GCGC 3 cut(s) 147, 328, 330
HinP1I GCGC 3 cut(s) 147, 328, 330
HindIII AAGCTT 2 cut(s) 287, 467
HinfI GANTC 9 cut(s) 124, 421, 437, 597, 604, 659, 679, 845, 1070
HpaII CCGG 1 cut(s) 811
HphI GGTGA 3 cut(s) 446, 878, 1156
Hpy166II GTNNAC 2 cut(s) 500, 1160
Hpy188I TCNGA 8 cut(s) 97, 195, 420, 495, 643, 675, 955, 1210
Hpy188III TCNNGA 9 cut(s) 47, 121, 128, 425, 601, 608, 1000, 1046, 1172
Hpy8I GTNNAC 2 cut(s) 500, 1160
HpyAV CCTTC 6 cut(s) 239, 643, 796, 868, 980, 1114
HpyCH4III ACNGT 3 cut(s) 265, 295, 504
HpyCH4V TGCA 7 cut(s) 226, 275, 369, 691, 757, 770, 821
HpyF10VI GCNNNNNNNGC 4 cut(s) 163, 581, 652, 754
HpyF3I CTNAG 5 cut(s) 143, 255, 576, 1230, 1314
Hsp92II CATG 4 cut(s) 186, 522, 761, 1389
HspAI GCGC 3 cut(s) 147, 328, 330
Ksp22I TGATCA 1 cut(s) 627
Kzo9I GATC 3 cut(s) 139, 610, 627
LmnI GCTCC 3 cut(s) 643, 1198, 1323
Lsp1109I GCAGC 2 cut(s) 525, 1042
LweI GCATC 3 cut(s) 1005, 1042, 1216
MabI ACCWGGT 1 cut(s) 21
MaeI CTAG 3 cut(s) 897, 1136, 1263
MaeIII GTNAC 3 cut(s) 881, 1265, 1291
MalI GATC 3 cut(s) 141, 612, 629
MboI GATC 3 cut(s) 139, 610, 627
MflI RGATCY 1 cut(s) 610
MhlI GDGCHC 5 cut(s) 30, 91, 120, 811, 1328
MluCI AATT 6 cut(s) 240, 336, 719, 902, 1274, 1362
MlyI GAGTC 1 cut(s) 591
MmeI TCCRAC 1 cut(s) 621
MnlI CCTC 9 cut(s) 86, 126, 163, 242, 556, 909, 970, 1060, 1225
MseI TTAA 6 cut(s) 269, 335, 447, 735, 816, 1125
MslI CAYNNNNRTG 2 cut(s) 1107, 1384
MspA1I CMGCKG 1 cut(s) 1345
MspI CCGG 1 cut(s) 811
MspR9I CCNGG 5 cut(s) 23, 811, 812, 959, 974
MvaI CCWGG 3 cut(s) 23, 959, 974
MvnI CGCG 2 cut(s) 48, 330
MwoI GCNNNNNNNGC 4 cut(s) 163, 581, 652, 754
NciI CCSGG 2 cut(s) 811, 812
NdeII GATC 3 cut(s) 139, 610, 627
NlaIII CATG 4 cut(s) 186, 522, 761, 1389
NlaIV GGNNCC 1 cut(s) 808
NmuCI GTSAC 2 cut(s) 1265, 1291
NruI TCGCGA 1 cut(s) 48
NspI RCATGY 1 cut(s) 761
PauI GCGCGC 1 cut(s) 328
PfeI GAWTC 8 cut(s) 124, 421, 437, 604, 659, 679, 845, 1070
PflMI CCANNNNNTGG 1 cut(s) 607
PfoI TCCNGGA 1 cut(s) 972
PkrI GCNGC 3 cut(s) 540, 543, 1057
PleI GAGTC 1 cut(s) 591
PpsI GAGTC 1 cut(s) 591
PshBI ATTAAT 2 cut(s) 335, 447
Psp124BI GAGCTC 1 cut(s) 120
Psp6I CCWGG 3 cut(s) 21, 957, 972
PspGI CCWGG 3 cut(s) 21, 957, 972
PspN4I GGNNCC 1 cut(s) 808
PspPI GGNCC 4 cut(s) 19, 955, 970, 1376
PstNI CAGNNNCTG 1 cut(s) 607
PsuI RGATCY 1 cut(s) 610
PteI GCGCGC 1 cut(s) 328
RruI TCGCGA 1 cut(s) 48
RseI CAYNNNNRTG 2 cut(s) 1107, 1384
SacI GAGCTC 1 cut(s) 120
SaqAI TTAA 6 cut(s) 269, 335, 447, 735, 816, 1125
SatI GCNGC 3 cut(s) 539, 542, 1056
Sau3AI GATC 3 cut(s) 139, 610, 627
Sau96I GGNCC 4 cut(s) 19, 955, 970, 1376
SchI GAGTC 1 cut(s) 591
ScrFI CCNGG 5 cut(s) 23, 811, 812, 959, 974
SduI GDGCHC 5 cut(s) 30, 91, 120, 811, 1328
SexAI ACCWGGT 1 cut(s) 21
SfaNI GCATC 3 cut(s) 1005, 1042, 1216
SfcI CTRYAG 2 cut(s) 702, 1353
SinI GGWCC 3 cut(s) 19, 955, 970
SmaI CCCGGG 1 cut(s) 812
SmiMI CAYNNNNRTG 2 cut(s) 1107, 1384
SmlI CTYRAG 5 cut(s) 29, 119, 167, 233, 512
SmoI CTYRAG 5 cut(s) 29, 119, 167, 233, 512
Sse9I AATT 6 cut(s) 240, 336, 719, 902, 1274, 1362
SsiI CCGC 4 cut(s) 7, 541, 1321, 1343
SspI AATATT 1 cut(s) 559
SspMI CTAG 3 cut(s) 897, 1136, 1263
SstI GAGCTC 1 cut(s) 120
StyD4I CCNGG 5 cut(s) 21, 809, 810, 957, 972
StyI CCWWGG 1 cut(s) 663
TaaI ACNGT 3 cut(s) 265, 295, 504
TaqI TCGA 3 cut(s) 138, 362, 1280
TasI AATT 6 cut(s) 240, 336, 719, 902, 1274, 1362
TauI GCSGC 1 cut(s) 544
TfiI GAWTC 8 cut(s) 124, 421, 437, 604, 659, 679, 845, 1070
Tru1I TTAA 6 cut(s) 269, 335, 447, 735, 816, 1125
Tru9I TTAA 6 cut(s) 269, 335, 447, 735, 816, 1125
TscAI CASTG 3 cut(s) 268, 300, 488
TseFI GTSAC 2 cut(s) 1265, 1291
TseI GCWGC 2 cut(s) 538, 1055
Tsp45I GTSAC 2 cut(s) 1265, 1291
TspDTI ATGAA 9 cut(s) 17, 318, 398, 843, 926, 996, 1044, 1133, 1374
TspGWI ACGGA 1 cut(s) 937
TspMI CCCGGG 1 cut(s) 810
TspRI CASTG 3 cut(s) 268, 300, 488
Van91I CCANNNNNTGG 1 cut(s) 607
VpaK11BI GGWCC 3 cut(s) 19, 955, 970
VspI ATTAAT 2 cut(s) 335, 447
XceI RCATGY 1 cut(s) 761
XmaI CCCGGG 1 cut(s) 810
XspI CTAG 3 cut(s) 897, 1136, 1263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.