RLG00000034385

Protein phosphatase 1 regulatory subunit

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
41798443 .. 41805427
6985 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034385

Sequence Viewer

Length: 1395 bp
ATGAAGCGGTTGAGCTTGGACCAGGTGCTCGAGGACAACAACACCCGCGACCCCAACTCCATTTCTTCTCTCATCCTCACTCACAGGGCTCTCTCCGATGTTTCGTGCTTGGGCGAGCTCAAGAATCTGGAGCGGCTCGATCTCAGCGCCAACACGCTCACTTCGCTTGAGGGGTTGAAGTCATGCGTCAATCTGAAATGGCTATCTGTTTCTCAAAATAAACTGCAAAGCCTCAAGGGAATTGAAGGACTTTCTAAGCTCACTGTGTTAAATGCAGGCAACAATAAGCTTACAGTGATGGATGAAGTCAAGTCTATTGTGAGTTTGCGCGCATTAATTTTGAATGATAATGAGATTGCTTCGATTTGCAGACTTGAACAGATGAAAGAGTTGAACACTCTTGTTCTTTCTAAAAATCCGATACGTGATATTGGTGATTCTTTGATGAATGTCAAATCTATCAAAAAGCTTTCTCTTTCTCACTGCCAACTTCGGAGTATACAGTCTTCGCTCAAGTCATGTGTTGAACTGAAAGAGCTGCGGCTCGCTCACAATAATATTGAGGGTCTCCCTGCTGAGTTGGCTCATAATAAGGGACTCCAGAATCTGGATCTGGGGAATAATGTGATCACAAGATGGTCGGAGCTGAAGGTGCTTGATTCCTTGGCCAATCTGAAGAATCTCAATCTGCAAGGAAACCCTGTAGCTGAAAAGGATAAATTCTCAAAGAAGATTAAAAAGATGTTGCCAAACCTGCATGTTTTCAATGCAAGACCAATAGATAAATACACCAAGAATGAGAAGGGTGCCCGGGTTGATGCAGTTGATGAAGAAAAAGATAGAGATTCAAAACATCAAGGGTTGGGTGAAACGAAGGATAGTAACCTTGATAATGCTAGAGAATTGGATATGAAGAGGAAATGGAATAGGGAGAAAGCAAATGAGAATGTCTCGGACCAGGAGGTTTTGGTCCAGGAGGATGAAGAAGAGGATAGCATCAAGAAAAAGAAGAGACATCGGGTTGTAAATGATGATTTTAGTAATCTTGCAGATGCTGCTGATTTGGAGGAATCAAAGGGAAAGAAACTGAGGAAGAAAGGCCATAAAGATGATGATACGAAGGTTAAAAAGAAACTAGATAAGGTGAAGCAACTAAGTGAACTCGATATTATTGATGATGCAGACACTCCATTTTTGGAGCTCTTTTCTGATGACAAAATGGTAGATGGTGGGGATGACGGCAAACAAACTAAAGACAAGGCTAGTCACACAAAATTGTCGAGTGGAGTAGTAACCATCACTTCAAGTAAAGCTAAGAAGCGGAGCACGGGTTCTACTTTACCGTTGTTGCCTGTAGATGAAATTGGAGTGGGTGGGCCATCAACATGGGACTGA

Protein Analysis

465

Amino Acids

51.76

Weight (kDa)

8.32

Isoelectric Point (pI)

36.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_4 PF12799 153 - 191 7.1e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 176 - 234 2e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 762
AccB1I GGYRCC 1 cut(s) 806
AccB7I CCANNNNNTGG 1 cut(s) 607
AccBSI CCGCTC 1 cut(s) 133
AccI GTMKAC 1 cut(s) 499
AccII CGCG 2 cut(s) 48, 330
AciI CCGC 5 cut(s) 7, 46, 133, 541, 1321
AclWI GGATC 1 cut(s) 618
AcoI YGGCCR 1 cut(s) 666
AcsI RAATTY 1 cut(s) 719
AcuI CTGAAG 2 cut(s) 668, 695
AfiI CCNNNNNNNGG 1 cut(s) 607
AgsI TTSAA 9 cut(s) 178, 245, 343, 377, 394, 527, 766, 849, 1305
AjnI CCWGG 3 cut(s) 21, 957, 972
AloI GAACNNNNNNTCC 2 cut(s) 1315, 1347
Alw21I GWGCWC 4 cut(s) 30, 120, 1203, 1328
Alw26I GTCTC 3 cut(s) 572, 955, 1006
AlwI GGATC 1 cut(s) 618
AlwNI CAGNNNCTG 2 cut(s) 607, 1055
Ama87I CYCGRG 2 cut(s) 29, 810
AoxI GGCC 3 cut(s) 666, 1099, 1376
ApeKI GCWGC 2 cut(s) 538, 1055
ApoI RAATTY 1 cut(s) 719
AseI ATTAAT 1 cut(s) 335
AspLEI GCGC 3 cut(s) 149, 330, 332
AspS9I GGNCC 4 cut(s) 19, 955, 970, 1376
AsuC2I CCSGG 2 cut(s) 811, 812
AsuHPI GGTGA 3 cut(s) 446, 878, 1156
AvaI CYCGRG 2 cut(s) 29, 810
AvaII GGWCC 3 cut(s) 19, 955, 970
BaeGI GKGCMC 1 cut(s) 811
BaeI ACNNNNGTAYC 2 cut(s) 1107, 1140
BalI TGGCCA 1 cut(s) 668
BanI GGYRCC 1 cut(s) 806
BanII GRGCYC 3 cut(s) 91, 120, 1203
BarI GAAGNNNNNNTAC 2 cut(s) 490, 522
BbsI GAAGAC 1 cut(s) 498
Bbv12I GWGCWC 4 cut(s) 30, 120, 1203, 1328
BbvI GCAGC 2 cut(s) 525, 1042
BccI CCATC 5 cut(s) 292, 630, 1220, 1304, 1387
BceAI ACGGC 1 cut(s) 1255
BciT130I CCWGG 3 cut(s) 23, 959, 974
BclI TGATCA 1 cut(s) 627
BcnI CCSGG 2 cut(s) 811, 812
BcoDI GTCTC 3 cut(s) 572, 955, 1006
BfaI CTAG 3 cut(s) 897, 1136, 1263
BfmI CTRYAG 2 cut(s) 702, 1353
BfoI RGCGCY 1 cut(s) 150
BfuAI ACCTGC 1 cut(s) 762
BisI GCNGC 4 cut(s) 134, 539, 542, 1056
BlsI GCNGC 4 cut(s) 135, 540, 543, 1057
Bme1390I CCNGG 5 cut(s) 23, 811, 812, 959, 974
Bme18I GGWCC 3 cut(s) 19, 955, 970
BmeT110I CYCGRG 2 cut(s) 29, 810
BmgT120I GGNCC 4 cut(s) 19, 955, 970, 1376
BmiI GGNNCC 1 cut(s) 808
BmrFI CCNGG 5 cut(s) 23, 811, 812, 959, 974
BmsI GCATC 4 cut(s) 808, 1005, 1042, 1168
BpiI GAAGAC 1 cut(s) 498
BplI GAGNNNNNCTC 2 cut(s) 935, 967
BpmI CTGGAG 2 cut(s) 149, 584
BpuEI CTTGAG 4 cut(s) 104, 188, 218, 497
BpuMI CCSGG 2 cut(s) 811, 812
BsaAI YACGTR 1 cut(s) 425
BsaI GGTCTC 1 cut(s) 572
BsaJI CCNNGG 2 cut(s) 663, 810
BsaXI ACNNNNNCTCC 4 cut(s) 41, 71, 1315, 1345
Bsc4I CCNNNNNNNGG 1 cut(s) 607
BseBI CCWGG 3 cut(s) 23, 959, 974
BseDI CCNNGG 2 cut(s) 663, 810
BseGI GGATG 4 cut(s) 72, 307, 985, 1240
BseLI CCNNNNNNNGG 1 cut(s) 607
BseMII CTCAG 3 cut(s) 157, 567, 1079
BsePI GCGCGC 1 cut(s) 328
BseSI GKGCMC 1 cut(s) 811
BseXI GCAGC 2 cut(s) 525, 1042
Bsh1236I CGCG 2 cut(s) 48, 330
BshFI GGCC 3 cut(s) 668, 1101, 1378
BshNI GGYRCC 1 cut(s) 806
BsiHKAI GWGCWC 4 cut(s) 30, 120, 1203, 1328
BsiHKCI CYCGRG 2 cut(s) 29, 810
BsiSI CCGG 1 cut(s) 811
BslFI GGGAC 1 cut(s) 609
BslI CCNNNNNNNGG 1 cut(s) 607
BsmAI GTCTC 3 cut(s) 572, 955, 1006
BsmFI GGGAC 1 cut(s) 609
BsnI GGCC 3 cut(s) 668, 1101, 1378
Bso31I GGTCTC 1 cut(s) 572
BsoBI CYCGRG 2 cut(s) 29, 810
Bsp1286I GDGCHC 6 cut(s) 30, 91, 120, 811, 1203, 1328
Bsp143I GATC 3 cut(s) 139, 610, 627
BspACI CCGC 5 cut(s) 7, 46, 133, 541, 1321
BspANI GGCC 3 cut(s) 668, 1101, 1378
BspCNI CTCAG 3 cut(s) 156, 568, 1080
BspFNI CGCG 2 cut(s) 48, 330
BspLI GGNNCC 1 cut(s) 808
BspMI ACCTGC 1 cut(s) 762
BspPI GGATC 1 cut(s) 618
BspT107I GGYRCC 1 cut(s) 806
BspTNI GGTCTC 1 cut(s) 572
BsrBI CCGCTC 1 cut(s) 133
BssECI CCNNGG 2 cut(s) 663, 810
BssHII GCGCGC 1 cut(s) 328
BssMI GATC 3 cut(s) 139, 610, 627
BssNAI GTATAC 1 cut(s) 500
BssT1I CCWWGG 1 cut(s) 663
Bst1107I GTATAC 1 cut(s) 500
Bst2UI CCWGG 3 cut(s) 23, 959, 974
Bst4CI ACNGT 4 cut(s) 265, 295, 504, 1344
Bst6I CTCTTC 3 cut(s) 908, 981, 1004
BstAPI GCANNNNNTGC 1 cut(s) 1055
BstBAI YACGTR 1 cut(s) 425
BstC8I GCNNGC 4 cut(s) 116, 277, 330, 546
BstDEI CTNAG 6 cut(s) 143, 255, 576, 1088, 1154, 1314
BstF5I GGATG 4 cut(s) 72, 307, 985, 1240
BstFNI CGCG 2 cut(s) 48, 330
BstH2I RGCGCY 1 cut(s) 150
BstHHI GCGC 3 cut(s) 149, 330, 332
BstKTI GATC 3 cut(s) 142, 613, 630
BstMAI GTCTC 3 cut(s) 572, 955, 1006
BstMBI GATC 3 cut(s) 139, 610, 627
BstMWI GCNNNNNNNGC 5 cut(s) 163, 581, 652, 754, 1055
BstNI CCWGG 3 cut(s) 23, 959, 974
BstNSI RCATGY 1 cut(s) 761
BstSCI CCNGG 5 cut(s) 21, 809, 810, 957, 972
BstSFI CTRYAG 2 cut(s) 702, 1353
BstSLI GKGCMC 1 cut(s) 811
BstUI CGCG 2 cut(s) 48, 330
BstV1I GCAGC 2 cut(s) 525, 1042
BstV2I GAAGAC 1 cut(s) 498
BstX2I RGATCY 1 cut(s) 610
BstXI CCANNNNNNTGG 1 cut(s) 1386
BstYI RGATCY 1 cut(s) 610
BstZ17I GTATAC 1 cut(s) 500
BsuRI GGCC 3 cut(s) 668, 1101, 1378
BtsCI GGATG 4 cut(s) 72, 307, 985, 1240
BtsI GCAGTG 1 cut(s) 481
BtsIMutI CAGTG 3 cut(s) 261, 300, 481
BveI ACCTGC 1 cut(s) 762
Cac8I GCNNGC 4 cut(s) 116, 277, 330, 546
CaiI CAGNNNCTG 2 cut(s) 607, 1055
CfoI GCGC 3 cut(s) 149, 330, 332
Cfr13I GGNCC 4 cut(s) 19, 955, 970, 1376
Cfr9I CCCGGG 1 cut(s) 810
CseI GACGC 1 cut(s) 175
CsiI ACCWGGT 1 cut(s) 21
CviAII CATG 4 cut(s) 183, 519, 758, 1386
DdeI CTNAG 6 cut(s) 143, 255, 576, 1088, 1154, 1314
DpnI GATC 3 cut(s) 141, 612, 629
DpnII GATC 3 cut(s) 139, 610, 627
EaeI YGGCCR 1 cut(s) 666
Eam1104I CTCTTC 3 cut(s) 908, 981, 1004
EarI CTCTTC 3 cut(s) 908, 981, 1004
Ecl136II GAGCTC 2 cut(s) 118, 1201
Eco130I CCWWGG 1 cut(s) 663
Eco24I GRGCYC 3 cut(s) 91, 120, 1203
Eco31I GGTCTC 1 cut(s) 572
Eco47I GGWCC 3 cut(s) 19, 955, 970
Eco53kI GAGCTC 2 cut(s) 118, 1201
Eco57I CTGAAG 2 cut(s) 668, 695
Eco88I CYCGRG 2 cut(s) 29, 810
EcoICRI GAGCTC 2 cut(s) 118, 1201
EcoRII CCWGG 3 cut(s) 21, 957, 972
EcoT14I CCWWGG 1 cut(s) 663
EcoT38I GRGCYC 3 cut(s) 91, 120, 1203
ErhI CCWWGG 1 cut(s) 663
FaeI CATG 4 cut(s) 186, 522, 761, 1389
FaiI YATR 8 cut(s) 184, 500, 520, 588, 759, 911, 1104, 1387
FaqI GGGAC 1 cut(s) 609
FatI CATG 4 cut(s) 182, 518, 757, 1385
FauI CCCGC 1 cut(s) 53
FbaI TGATCA 1 cut(s) 627
FblI GTMKAC 1 cut(s) 499
Fnu4HI GCNGC 4 cut(s) 134, 539, 542, 1056
FokI GGATG 4 cut(s) 59, 314, 992, 1247
FriOI GRGCYC 3 cut(s) 91, 120, 1203
Fsp4HI GCNGC 4 cut(s) 134, 539, 542, 1056
FspBI CTAG 3 cut(s) 897, 1136, 1263
GlaI GCGC 3 cut(s) 148, 329, 331
GluI GCNGC 4 cut(s) 134, 539, 542, 1056
GsuI CTGGAG 2 cut(s) 149, 584
HaeII RGCGCY 1 cut(s) 150
HaeIII GGCC 3 cut(s) 668, 1101, 1378
HapII CCGG 1 cut(s) 811
HgaI GACGC 1 cut(s) 175
HhaI GCGC 3 cut(s) 149, 330, 332
Hin1II CATG 4 cut(s) 186, 522, 761, 1389
Hin6I GCGC 3 cut(s) 147, 328, 330
HinP1I GCGC 3 cut(s) 147, 328, 330
HindIII AAGCTT 2 cut(s) 287, 467
HinfI GANTC 8 cut(s) 124, 437, 597, 604, 659, 679, 845, 1070
HpaII CCGG 1 cut(s) 811
HphI GGTGA 3 cut(s) 446, 878, 1156
Hpy166II GTNNAC 2 cut(s) 500, 1160
Hpy188I TCNGA 8 cut(s) 97, 195, 420, 495, 643, 675, 955, 1210
Hpy188III TCNNGA 5 cut(s) 121, 128, 601, 608, 1000
Hpy8I GTNNAC 2 cut(s) 500, 1160
HpyAV CCTTC 5 cut(s) 239, 643, 796, 868, 1114
HpyCH4III ACNGT 4 cut(s) 265, 295, 504, 1344
HpyCH4IV ACGT 1 cut(s) 424
HpyCH4V TGCA 9 cut(s) 226, 275, 369, 691, 757, 770, 821, 1049, 1181
HpyF10VI GCNNNNNNNGC 5 cut(s) 163, 581, 652, 754, 1055
HpyF3I CTNAG 6 cut(s) 143, 255, 576, 1088, 1154, 1314
HpySE526I ACGT 1 cut(s) 424
Hsp92II CATG 4 cut(s) 186, 522, 761, 1389
HspAI GCGC 3 cut(s) 147, 328, 330
Ksp22I TGATCA 1 cut(s) 627
Kzo9I GATC 3 cut(s) 139, 610, 627
LmnI GCTCC 4 cut(s) 130, 643, 1198, 1323
Lsp1109I GCAGC 2 cut(s) 525, 1042
LweI GCATC 4 cut(s) 808, 1005, 1042, 1168
MabI ACCWGGT 1 cut(s) 21
MaeI CTAG 3 cut(s) 897, 1136, 1263
MaeII ACGT 1 cut(s) 424
MaeIII GTNAC 3 cut(s) 881, 1265, 1291
MalI GATC 3 cut(s) 141, 612, 629
MbiI CCGCTC 1 cut(s) 133
MboI GATC 3 cut(s) 139, 610, 627
MflI RGATCY 1 cut(s) 610
MhlI GDGCHC 6 cut(s) 30, 91, 120, 811, 1203, 1328
MlsI TGGCCA 1 cut(s) 668
MluCI AATT 6 cut(s) 240, 336, 719, 902, 1274, 1362
MluNI TGGCCA 1 cut(s) 668
MlyI GAGTC 1 cut(s) 591
MmeI TCCRAC 1 cut(s) 621
Mox20I TGGCCA 1 cut(s) 668
MscI TGGCCA 1 cut(s) 668
MseI TTAA 4 cut(s) 269, 335, 735, 1125
MslI CAYNNNNRTG 2 cut(s) 1107, 1384
Msp20I TGGCCA 1 cut(s) 668
MspI CCGG 1 cut(s) 811
MspR9I CCNGG 5 cut(s) 23, 811, 812, 959, 974
MvaI CCWGG 3 cut(s) 23, 959, 974
MvnI CGCG 2 cut(s) 48, 330
MwoI GCNNNNNNNGC 5 cut(s) 163, 581, 652, 754, 1055
NciI CCSGG 2 cut(s) 811, 812
NdeII GATC 3 cut(s) 139, 610, 627
NlaIII CATG 4 cut(s) 186, 522, 761, 1389
NlaIV GGNNCC 1 cut(s) 808
NmuCI GTSAC 1 cut(s) 1265
NspI RCATGY 1 cut(s) 761
PaeR7I CTCGAG 1 cut(s) 29
PauI GCGCGC 1 cut(s) 328
PfeI GAWTC 7 cut(s) 124, 437, 604, 659, 679, 845, 1070
PflMI CCANNNNNTGG 1 cut(s) 607
PfoI TCCNGGA 1 cut(s) 972
PkrI GCNGC 4 cut(s) 135, 540, 543, 1057
PleI GAGTC 1 cut(s) 591
PpsI GAGTC 1 cut(s) 591
Ppu21I YACGTR 1 cut(s) 425
PshBI ATTAAT 1 cut(s) 335
Psp124BI GAGCTC 2 cut(s) 120, 1203
Psp6I CCWGG 3 cut(s) 21, 957, 972
PspGI CCWGG 3 cut(s) 21, 957, 972
PspN4I GGNNCC 1 cut(s) 808
PspPI GGNCC 4 cut(s) 19, 955, 970, 1376
PspXI VCTCGAGB 1 cut(s) 29
PstNI CAGNNNCTG 2 cut(s) 607, 1055
PsuI RGATCY 1 cut(s) 610
PteI GCGCGC 1 cut(s) 328
RseI CAYNNNNRTG 2 cut(s) 1107, 1384
SacI GAGCTC 2 cut(s) 120, 1203
SaqAI TTAA 4 cut(s) 269, 335, 735, 1125
SatI GCNGC 4 cut(s) 134, 539, 542, 1056
Sau3AI GATC 3 cut(s) 139, 610, 627
Sau96I GGNCC 4 cut(s) 19, 955, 970, 1376
SchI GAGTC 1 cut(s) 591
ScrFI CCNGG 5 cut(s) 23, 811, 812, 959, 974
SduI GDGCHC 6 cut(s) 30, 91, 120, 811, 1203, 1328
SexAI ACCWGGT 1 cut(s) 21
SfaNI GCATC 4 cut(s) 808, 1005, 1042, 1168
SfcI CTRYAG 2 cut(s) 702, 1353
Sfr274I CTCGAG 1 cut(s) 29
SinI GGWCC 3 cut(s) 19, 955, 970
SlaI CTCGAG 1 cut(s) 29
SmaI CCCGGG 1 cut(s) 812
SmiMI CAYNNNNRTG 2 cut(s) 1107, 1384
SmlI CTYRAG 5 cut(s) 29, 119, 167, 233, 512
SmoI CTYRAG 5 cut(s) 29, 119, 167, 233, 512
Sse9I AATT 6 cut(s) 240, 336, 719, 902, 1274, 1362
SsiI CCGC 5 cut(s) 7, 46, 133, 541, 1321
SspI AATATT 1 cut(s) 559
SspMI CTAG 3 cut(s) 897, 1136, 1263
SstI GAGCTC 2 cut(s) 120, 1203
StyD4I CCNGG 5 cut(s) 21, 809, 810, 957, 972
StyI CCWWGG 1 cut(s) 663
TaaI ACNGT 4 cut(s) 265, 295, 504, 1344
TaiI ACGT 1 cut(s) 427
TaqI TCGA 5 cut(s) 30, 138, 362, 1164, 1280
TasI AATT 6 cut(s) 240, 336, 719, 902, 1274, 1362
TauI GCSGC 2 cut(s) 136, 544
TfiI GAWTC 7 cut(s) 124, 437, 604, 659, 679, 845, 1070
Tru1I TTAA 4 cut(s) 269, 335, 735, 1125
Tru9I TTAA 4 cut(s) 269, 335, 735, 1125
TscAI CASTG 3 cut(s) 268, 300, 488
TseFI GTSAC 1 cut(s) 1265
TseI GCWGC 2 cut(s) 538, 1055
Tsp45I GTSAC 1 cut(s) 1265
TspDTI ATGAA 8 cut(s) 17, 318, 398, 461, 843, 926, 996, 1374
TspMI CCCGGG 1 cut(s) 810
TspRI CASTG 3 cut(s) 268, 300, 488
Van91I CCANNNNNTGG 1 cut(s) 607
VpaK11BI GGWCC 3 cut(s) 19, 955, 970
VspI ATTAAT 1 cut(s) 335
XapI RAATTY 1 cut(s) 719
XceI RCATGY 1 cut(s) 761
XhoI CTCGAG 1 cut(s) 29
XmaI CCCGGG 1 cut(s) 810
XmiI GTMKAC 1 cut(s) 499
XspI CTAG 3 cut(s) 897, 1136, 1263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.