Rh5CG341600

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0006395
Physical Location & Seq
Reverse (-)
39137317 .. 39138741
1425 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG341600.1

Sequence Viewer

Length: 861 bp
ATGCCGGTTTCTATTCTCGACCGCAACGAGGCTGCATATGATCACTATCTCCATATTGCTTCCTGTCTTCCAAAAGCGAAGGGAATTATAATAAACACCATCCAAGAACTTGAGCCTCGAGCAATCAAGGCCATAAAGGAAGGTATTTGTGTTCCTAATCATCGAACCCCGCCATTATATCACATCGGACCGTTCATTTCCGATCGCGACTCTGAAAATAGGTCGATCCAAGGCGGTTCGCCTATGCCAACTAACTGTTCCATGTTGTTATGGCTGGATGAGCAGCCGAGCCGGAGTGTGGTGTTCTTGTGCTTTGGAAGCAGAGGTACGTTTTCTGAAGAGCAGTTTAAGGAATTGGCTATAGGCTTGGAGAGAAGCAAGTTGAGATTTTTGTGGGTTGTGAGGAATCAGCTGGATTTGGAGGTACTGCTACCACAAGGGTTCTTGGAGAGGACCAAAGATAGAGGTCTTGTAGTCACGTCTTGGGCGCCACAGGTTGCTATTCTAAGTCATGAATCTGTGGGTGGGTTTGTGACTCACTGTGGGTGGAACTCGATCACTGAAGCAGTGACTTATGGAGTGCCTATGGTGGCTTGGCCTTTGTATTCCGAGCAGGAAGTGAACAGTGTGGTGTTGGTGGAGGAAATGAAGCTGGCAATACCGATATTTGAGGTGCTGTCGAAGTCAAAACAAGGGTTGGTGAGTGCAGATGAGGTGGAGAAGAAGGTGTTGCGGTTGATGGACATGGAGTCGGAAGAAGGGAAAAGTCTAAGAGAAAGGTGTCAAGCTGTCAAGGCAATGGGTTTGGCTGCTTGGAGAAATGGTGGCTCATCCTTCACTTCTTTTTCAGAGCTGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

286

Amino Acids

31.99

Weight (kDa)

5.65

Isoelectric Point (pI)

49.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 83 - 236 4.6e-22 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 89
AccB1I GGYRCC 1 cut(s) 487
AccII CGCG 1 cut(s) 207
AciI CCGC 4 cut(s) 22, 170, 234, 733
AclWI GGATC 1 cut(s) 220
AcuI CTGAAG 2 cut(s) 357, 582
AcyI GRCGYC 1 cut(s) 488
AfaI GTAC 2 cut(s) 328, 426
AfiI CCNNNNNNNGG 2 cut(s) 28, 298
AhdI GACNNNNNGTC 1 cut(s) 748
AjiI CACGTC 1 cut(s) 480
AjuI GAANNNNNNNTTGG 2 cut(s) 241, 273
AluBI AGCT 4 cut(s) 412, 652, 788, 853
AluI AGCT 4 cut(s) 412, 652, 788, 853
AlwI GGATC 1 cut(s) 220
Ama87I CYCGRG 1 cut(s) 117
AoxI GGCC 2 cut(s) 129, 596
ApeKI GCWGC 3 cut(s) 32, 283, 809
AspLEI GCGC 1 cut(s) 490
AspS9I GGNCC 2 cut(s) 188, 453
AsuHPI GGTGA 1 cut(s) 712
AvaI CYCGRG 1 cut(s) 117
AvaII GGWCC 2 cut(s) 188, 453
BanI GGYRCC 1 cut(s) 487
BarI GAAGNNNNNNTAC 2 cut(s) 310, 342
BbsI GAAGAC 1 cut(s) 59
BbvI GCAGC 3 cut(s) 19, 295, 796
BccI CCATC 2 cut(s) 107, 733
BclI TGATCA 1 cut(s) 40
BfmI CTRYAG 1 cut(s) 360
BfoI RGCGCY 1 cut(s) 491
BisI GCNGC 3 cut(s) 33, 284, 810
BlsI GCNGC 3 cut(s) 34, 285, 811
Bme18I GGWCC 2 cut(s) 188, 453
BmeRI GACNNNNNGTC 1 cut(s) 748
BmeT110I CYCGRG 1 cut(s) 117
BmgBI CACGTC 1 cut(s) 480
BmgT120I GGNCC 2 cut(s) 188, 453
BmiI GGNNCC 1 cut(s) 489
BpiI GAAGAC 1 cut(s) 59
BpuEI CTTGAG 1 cut(s) 131
BsaBI GATNNNNATC 1 cut(s) 45
BsaHI GRCGYC 1 cut(s) 488
BsaJI CCNNGG 1 cut(s) 229
BsaXI ACNNNNNCTCC 2 cut(s) 808, 838
Bsc4I CCNNNNNNNGG 2 cut(s) 28, 298
Bse118I RCCGGY 1 cut(s) 4
Bse3DI GCAATG 1 cut(s) 804
Bse8I GATNNNNATC 1 cut(s) 45
BseDI CCNNGG 1 cut(s) 229
BseGI GGATG 3 cut(s) 99, 283, 830
BseJI GATNNNNATC 1 cut(s) 45
BseLI CCNNNNNNNGG 2 cut(s) 28, 298
BseMI GCAATG 1 cut(s) 804
BseXI GCAGC 3 cut(s) 19, 295, 796
BsgI GTGCAG 1 cut(s) 726
Bsh1236I CGCG 1 cut(s) 207
Bsh1285I CGRYCG 2 cut(s) 22, 205
BshFI GGCC 2 cut(s) 131, 598
BshNI GGYRCC 1 cut(s) 487
BsiEI CGRYCG 2 cut(s) 22, 205
BsiHKCI CYCGRG 1 cut(s) 117
BsiSI CCGG 2 cut(s) 5, 292
BslI CCNNNNNNNGG 2 cut(s) 28, 298
BsnI GGCC 2 cut(s) 131, 598
BsoBI CYCGRG 1 cut(s) 117
Bsp143I GATC 4 cut(s) 40, 202, 225, 555
Bsp68I TCGCGA 1 cut(s) 207
BspACI CCGC 4 cut(s) 22, 170, 234, 733
BspANI GGCC 2 cut(s) 131, 598
BspFNI CGCG 1 cut(s) 207
BspHI TCATGA 1 cut(s) 511
BspLI GGNNCC 1 cut(s) 489
BspPI GGATC 1 cut(s) 220
BspQI GCTCTTC 1 cut(s) 333
BspT107I GGYRCC 1 cut(s) 487
BsrDI GCAATG 1 cut(s) 804
BsrFI RCCGGY 1 cut(s) 4
BssAI RCCGGY 1 cut(s) 4
BssECI CCNNGG 1 cut(s) 229
BssMI GATC 4 cut(s) 40, 202, 225, 555
BssNI GRCGYC 1 cut(s) 488
BssT1I CCWWGG 1 cut(s) 229
Bst4CI ACNGT 4 cut(s) 192, 257, 542, 626
Bst6I CTCTTC 1 cut(s) 333
BstACI GRCGYC 1 cut(s) 488
BstC8I GCNNGC 1 cut(s) 654
BstDEI CTNAG 2 cut(s) 506, 770
BstF5I GGATG 3 cut(s) 99, 283, 830
BstFNI CGCG 1 cut(s) 207
BstH2I RGCGCY 1 cut(s) 491
BstHHI GCGC 1 cut(s) 490
BstKTI GATC 4 cut(s) 43, 205, 228, 558
BstMBI GATC 4 cut(s) 40, 202, 225, 555
BstMCI CGRYCG 2 cut(s) 22, 205
BstMWI GCNNNNNNNGC 4 cut(s) 128, 280, 318, 794
BstSFI CTRYAG 1 cut(s) 360
BstUI CGCG 1 cut(s) 207
BstV1I GCAGC 3 cut(s) 19, 295, 796
BstV2I GAAGAC 1 cut(s) 59
BsuRI GGCC 2 cut(s) 131, 598
BtrI CACGTC 1 cut(s) 480
BtsCI GGATG 3 cut(s) 99, 283, 830
BtsI GCAGTG 1 cut(s) 573
BtsIMutI CAGTG 4 cut(s) 538, 558, 573, 631
BtuMI TCGCGA 1 cut(s) 207
Cac8I GCNNGC 1 cut(s) 654
CciI TCATGA 1 cut(s) 511
CfoI GCGC 1 cut(s) 490
Cfr10I RCCGGY 1 cut(s) 4
Cfr13I GGNCC 2 cut(s) 188, 453
CpoI CGGWCCG 1 cut(s) 188
Csp6I GTAC 2 cut(s) 327, 425
CspI CGGWCCG 1 cut(s) 188
CviAII CATG 3 cut(s) 262, 512, 745
CviQI GTAC 2 cut(s) 327, 425
DdeI CTNAG 2 cut(s) 506, 770
DinI GGCGCC 1 cut(s) 489
DpnI GATC 4 cut(s) 42, 204, 227, 557
DpnII GATC 4 cut(s) 40, 202, 225, 555
DriI GACNNNNNGTC 1 cut(s) 748
Eam1104I CTCTTC 1 cut(s) 333
Eam1105I GACNNNNNGTC 1 cut(s) 748
EarI CTCTTC 1 cut(s) 333
Eco130I CCWWGG 1 cut(s) 229
Eco47I GGWCC 2 cut(s) 188, 453
Eco57I CTGAAG 2 cut(s) 357, 582
Eco88I CYCGRG 1 cut(s) 117
EcoT14I CCWWGG 1 cut(s) 229
EgeI GGCGCC 1 cut(s) 489
EheI GGCGCC 1 cut(s) 489
ErhI CCWWGG 1 cut(s) 229
FaeI CATG 3 cut(s) 265, 515, 748
FatI CATG 3 cut(s) 261, 511, 744
FauI CCCGC 1 cut(s) 177
FauNDI CATATG 1 cut(s) 37
FbaI TGATCA 1 cut(s) 40
Fnu4HI GCNGC 3 cut(s) 33, 284, 810
FokI GGATG 3 cut(s) 86, 290, 817
Fsp4HI GCNGC 3 cut(s) 33, 284, 810
GlaI GCGC 1 cut(s) 489
GluI GCNGC 3 cut(s) 33, 284, 810
HaeII RGCGCY 1 cut(s) 491
HaeIII GGCC 2 cut(s) 131, 598
HapII CCGG 2 cut(s) 5, 292
HhaI GCGC 1 cut(s) 490
Hin1I GRCGYC 1 cut(s) 488
Hin1II CATG 3 cut(s) 265, 515, 748
Hin6I GCGC 1 cut(s) 488
HinP1I GCGC 1 cut(s) 488
HinfI GANTC 5 cut(s) 209, 406, 515, 535, 749
HpaII CCGG 2 cut(s) 5, 292
HphI GGTGA 1 cut(s) 712
Hpy166II GTNNAC 1 cut(s) 622
Hpy188I TCNGA 7 cut(s) 188, 202, 214, 337, 610, 754, 850
Hpy188III TCNNGA 3 cut(s) 17, 206, 512
Hpy8I GTNNAC 1 cut(s) 622
HpyAV CCTTC 5 cut(s) 73, 134, 718, 752, 844
HpyCH4III ACNGT 4 cut(s) 192, 257, 542, 626
HpyCH4IV ACGT 2 cut(s) 329, 479
HpyCH4V TGCA 2 cut(s) 35, 707
HpyF10VI GCNNNNNNNGC 4 cut(s) 128, 280, 318, 794
HpyF3I CTNAG 2 cut(s) 506, 770
HpySE526I ACGT 2 cut(s) 329, 479
Hsp92I GRCGYC 1 cut(s) 488
Hsp92II CATG 3 cut(s) 265, 515, 748
HspAI GCGC 1 cut(s) 488
KasI GGCGCC 1 cut(s) 487
Ksp22I TGATCA 1 cut(s) 40
Kzo9I GATC 4 cut(s) 40, 202, 225, 555
LguI GCTCTTC 1 cut(s) 333
LpnPI CCDG 9 cut(s) 18, 76, 260, 305, 398, 479, 599, 638, 839
Lsp1109I GCAGC 3 cut(s) 19, 295, 796
MaeII ACGT 2 cut(s) 329, 479
MaeIII GTNAC 3 cut(s) 475, 532, 568
MalI GATC 4 cut(s) 42, 204, 227, 557
MboI GATC 4 cut(s) 40, 202, 225, 555
MboII GAAGA 4 cut(s) 59, 350, 733, 767
MluCI AATT 2 cut(s) 84, 353
Mly113I GGCGCC 1 cut(s) 488
MlyI GAGTC 3 cut(s) 203, 529, 758
MmeI TCCRAC 1 cut(s) 732
MseI TTAA 1 cut(s) 348
MspA1I CMGCKG 1 cut(s) 412
MspI CCGG 2 cut(s) 5, 292
MvnI CGCG 1 cut(s) 207
MwoI GCNNNNNNNGC 4 cut(s) 128, 280, 318, 794
NarI GGCGCC 1 cut(s) 488
NdeI CATATG 1 cut(s) 37
NdeII GATC 4 cut(s) 40, 202, 225, 555
NlaIII CATG 3 cut(s) 265, 515, 748
NlaIV GGNNCC 1 cut(s) 489
NmeAIII GCCGAG 1 cut(s) 312
NmuCI GTSAC 3 cut(s) 475, 532, 568
NruI TCGCGA 1 cut(s) 207
PaeR7I CTCGAG 1 cut(s) 117
PagI TCATGA 1 cut(s) 511
PciSI GCTCTTC 1 cut(s) 333
PcsI WCGNNNNNNNCGW 1 cut(s) 24
PfeI GAWTC 2 cut(s) 406, 515
PkrI GCNGC 3 cut(s) 34, 285, 811
Ple19I CGATCG 1 cut(s) 205
PleI GAGTC 3 cut(s) 203, 529, 757
PluTI GGCGCC 1 cut(s) 491
PpsI GAGTC 3 cut(s) 203, 529, 757
PsiI TTATAA 1 cut(s) 89
PspN4I GGNNCC 1 cut(s) 489
PspPI GGNCC 2 cut(s) 188, 453
PspXI VCTCGAGB 1 cut(s) 117
PvuI CGATCG 1 cut(s) 205
PvuII CAGCTG 1 cut(s) 412
RruI TCGCGA 1 cut(s) 207
RsaI GTAC 2 cut(s) 328, 426
RsaNI GTAC 2 cut(s) 327, 425
Rsr2I CGGWCCG 1 cut(s) 188
RsrII CGGWCCG 1 cut(s) 188
SapI GCTCTTC 1 cut(s) 333
SaqAI TTAA 1 cut(s) 348
SatI GCNGC 3 cut(s) 33, 284, 810
Sau3AI GATC 4 cut(s) 40, 202, 225, 555
Sau96I GGNCC 2 cut(s) 188, 453
SchI GAGTC 3 cut(s) 203, 529, 758
SfcI CTRYAG 1 cut(s) 360
SfoI GGCGCC 1 cut(s) 489
Sfr274I CTCGAG 1 cut(s) 117
SinI GGWCC 2 cut(s) 188, 453
SlaI CTCGAG 1 cut(s) 117
SmlI CTYRAG 2 cut(s) 110, 117
SmoI CTYRAG 2 cut(s) 110, 117
Sse9I AATT 2 cut(s) 84, 353
SsiI CCGC 4 cut(s) 22, 170, 234, 733
SspDI GGCGCC 1 cut(s) 487
StyI CCWWGG 1 cut(s) 229
TaaI ACNGT 4 cut(s) 192, 257, 542, 626
TaiI ACGT 2 cut(s) 332, 482
TaqI TCGA 6 cut(s) 18, 118, 163, 224, 554, 680
TasI AATT 2 cut(s) 84, 353
TfiI GAWTC 2 cut(s) 406, 515
Tru1I TTAA 1 cut(s) 348
Tru9I TTAA 1 cut(s) 348
TscAI CASTG 4 cut(s) 545, 565, 573, 631
TseFI GTSAC 3 cut(s) 475, 532, 568
TseI GCWGC 3 cut(s) 32, 283, 809
Tsp45I GTSAC 3 cut(s) 475, 532, 568
TspDTI ATGAA 3 cut(s) 184, 528, 662
TspRI CASTG 4 cut(s) 545, 565, 573, 631
VpaK11BI GGWCC 2 cut(s) 188, 453
XhoI CTCGAG 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.