ATP-dependent zinc metalloprotease FTSH
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD10G1209500.v1.1 MD10G1209600.v1.1 |
| rosa_chinensis | RchiOBHm_Chr5g0060561 |
| rosa_roxburghii | Rroxscaffold_1G00021830 Rroxscaffold_2G00110380 Rroxscaffold_3G00232160 Rroxscaffold_4G00310800 Rroxscaffold_7G00172290 |
| rosa_samantha | Rh5CG431800 Rh6AG098400 Rh6BG090100 Rh6CG087000 Rh6DG081200 Rh7AG362700 Rh7BG287700 Rh7CG467600 Rh7DG450000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 66 |
| AciI | CCGC | 2 cut(s) | 64, 66 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 70 |
| AgsI | TTSAA | 1 cut(s) | 130 |
| AluBI | AGCT | 1 cut(s) | 170 |
| AluI | AGCT | 1 cut(s) | 170 |
| Ama87I | CYCGRG | 1 cut(s) | 230 |
| ApeKI | GCWGC | 1 cut(s) | 299 |
| AspS9I | GGNCC | 1 cut(s) | 84 |
| AsuHPI | GGTGA | 2 cut(s) | 107, 115 |
| AvaI | CYCGRG | 1 cut(s) | 230 |
| AvaII | GGWCC | 1 cut(s) | 84 |
| BaeGI | GKGCMC | 1 cut(s) | 231 |
| BbvI | GCAGC | 1 cut(s) | 286 |
| BccI | CCATC | 1 cut(s) | 255 |
| BceAI | ACGGC | 1 cut(s) | 311 |
| BisI | GCNGC | 2 cut(s) | 64, 300 |
| BlsI | GCNGC | 2 cut(s) | 65, 301 |
| Bme18I | GGWCC | 1 cut(s) | 84 |
| BmeT110I | CYCGRG | 1 cut(s) | 230 |
| BmgT120I | GGNCC | 1 cut(s) | 84 |
| BmiI | GGNNCC | 1 cut(s) | 285 |
| BmrI | ACTGGG | 1 cut(s) | 126 |
| BmuI | ACTGGG | 1 cut(s) | 126 |
| BoxI | GACNNNNGTC | 1 cut(s) | 30 |
| BsaJI | CCNNGG | 1 cut(s) | 64 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 70 |
| Bse1I | ACTGG | 2 cut(s) | 32, 121 |
| BseDI | CCNNGG | 1 cut(s) | 64 |
| BseGI | GGATG | 1 cut(s) | 139 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 70 |
| BseMII | CTCAG | 1 cut(s) | 210 |
| BseNI | ACTGG | 2 cut(s) | 32, 121 |
| BseSI | GKGCMC | 1 cut(s) | 231 |
| BseXI | GCAGC | 1 cut(s) | 286 |
| BseYI | CCCAGC | 1 cut(s) | 170 |
| Bsh1236I | CGCG | 1 cut(s) | 66 |
| BsiHKCI | CYCGRG | 1 cut(s) | 230 |
| BslFI | GGGAC | 1 cut(s) | 208 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 70 |
| BsmFI | GGGAC | 1 cut(s) | 208 |
| BsoBI | CYCGRG | 1 cut(s) | 230 |
| Bsp1286I | GDGCHC | 1 cut(s) | 231 |
| BspACI | CCGC | 2 cut(s) | 64, 66 |
| BspCNI | CTCAG | 1 cut(s) | 211 |
| BspFNI | CGCG | 1 cut(s) | 66 |
| BspLI | GGNNCC | 1 cut(s) | 285 |
| BsrI | ACTGG | 2 cut(s) | 32, 121 |
| BssECI | CCNNGG | 1 cut(s) | 64 |
| BstC8I | GCNNGC | 1 cut(s) | 168 |
| BstDEI | CTNAG | 2 cut(s) | 198, 219 |
| BstDSI | CCRYGG | 1 cut(s) | 64 |
| BstF5I | GGATG | 1 cut(s) | 139 |
| BstFNI | CGCG | 1 cut(s) | 66 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 30 |
| BstSLI | GKGCMC | 1 cut(s) | 231 |
| BstUI | CGCG | 1 cut(s) | 66 |
| BstV1I | GCAGC | 1 cut(s) | 286 |
| BtgI | CCRYGG | 1 cut(s) | 64 |
| BtsCI | GGATG | 1 cut(s) | 139 |
| BtsIMutI | CAGTG | 1 cut(s) | 257 |
| Cac8I | GCNNGC | 1 cut(s) | 168 |
| Cfr13I | GGNCC | 1 cut(s) | 84 |
| Cfr42I | CCGCGG | 1 cut(s) | 67 |
| CviAII | CATG | 1 cut(s) | 279 |
| CviJI | RGCY | 3 cut(s) | 5, 50, 170 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 50, 170 |
| DdeI | CTNAG | 2 cut(s) | 198, 219 |
| Eco32I | GATATC | 1 cut(s) | 271 |
| Eco47I | GGWCC | 1 cut(s) | 84 |
| Eco88I | CYCGRG | 1 cut(s) | 230 |
| EcoRV | GATATC | 1 cut(s) | 271 |
| FaeI | CATG | 1 cut(s) | 282 |
| FaiI | YATR | 5 cut(s) | 59, 280, 315, 349, 351 |
| FaqI | GGGAC | 1 cut(s) | 208 |
| FatI | CATG | 1 cut(s) | 278 |
| Fnu4HI | GCNGC | 2 cut(s) | 64, 300 |
| FokI | GGATG | 1 cut(s) | 146 |
| Fsp4HI | GCNGC | 2 cut(s) | 64, 300 |
| GluI | GCNGC | 2 cut(s) | 64, 300 |
| GsaI | CCCAGC | 1 cut(s) | 174 |
| Hin1II | CATG | 1 cut(s) | 282 |
| HinfI | GANTC | 2 cut(s) | 98, 247 |
| HphI | GGTGA | 2 cut(s) | 107, 115 |
| Hpy188I | TCNGA | 1 cut(s) | 73 |
| HpyAV | CCTTC | 4 cut(s) | 103, 124, 139, 259 |
| HpyCH4V | TGCA | 1 cut(s) | 302 |
| HpyF3I | CTNAG | 2 cut(s) | 198, 219 |
| Hsp92II | CATG | 1 cut(s) | 282 |
| KspI | CCGCGG | 1 cut(s) | 67 |
| LmnI | GCTCC | 1 cut(s) | 73 |
| LpnPI | CCDG | 5 cut(s) | 13, 32, 67, 102, 156 |
| Lsp1109I | GCAGC | 1 cut(s) | 286 |
| MaeIII | GTNAC | 1 cut(s) | 95 |
| MboII | GAAGA | 2 cut(s) | 118, 188 |
| MhlI | GDGCHC | 1 cut(s) | 231 |
| MluCI | AATT | 3 cut(s) | 88, 179, 357 |
| MlyI | GAGTC | 1 cut(s) | 92 |
| MmeI | TCCRAC | 2 cut(s) | 183, 224 |
| MnlI | CCTC | 1 cut(s) | 182 |
| MseI | TTAA | 1 cut(s) | 182 |
| MspA1I | CMGCKG | 1 cut(s) | 66 |
| MvnI | CGCG | 1 cut(s) | 66 |
| NlaIII | CATG | 1 cut(s) | 282 |
| NlaIV | GGNNCC | 1 cut(s) | 285 |
| NmuCI | GTSAC | 1 cut(s) | 95 |
| PfeI | GAWTC | 1 cut(s) | 247 |
| PkrI | GCNGC | 2 cut(s) | 65, 301 |
| PleI | GAGTC | 1 cut(s) | 92 |
| PpsI | GAGTC | 1 cut(s) | 92 |
| PshAI | GACNNNNGTC | 1 cut(s) | 30 |
| PspFI | CCCAGC | 1 cut(s) | 170 |
| PspN4I | GGNNCC | 1 cut(s) | 285 |
| PspPI | GGNCC | 1 cut(s) | 84 |
| SacII | CCGCGG | 1 cut(s) | 67 |
| SaqAI | TTAA | 1 cut(s) | 182 |
| SatI | GCNGC | 2 cut(s) | 64, 300 |
| Sau96I | GGNCC | 1 cut(s) | 84 |
| SchI | GAGTC | 1 cut(s) | 92 |
| SduI | GDGCHC | 1 cut(s) | 231 |
| SetI | ASST | 5 cut(s) | 150, 172, 193, 212, 289 |
| Sfr303I | CCGCGG | 1 cut(s) | 67 |
| SgrBI | CCGCGG | 1 cut(s) | 67 |
| SinI | GGWCC | 1 cut(s) | 84 |
| Sse9I | AATT | 3 cut(s) | 88, 179, 357 |
| SsiI | CCGC | 2 cut(s) | 64, 66 |
| TaqII | GACCGA | 1 cut(s) | 42 |
| TasI | AATT | 3 cut(s) | 88, 179, 357 |
| TauI | GCSGC | 1 cut(s) | 66 |
| TfiI | GAWTC | 1 cut(s) | 247 |
| Tru1I | TTAA | 1 cut(s) | 182 |
| Tru9I | TTAA | 1 cut(s) | 182 |
| TscAI | CASTG | 1 cut(s) | 257 |
| TseFI | GTSAC | 1 cut(s) | 95 |
| TseI | GCWGC | 1 cut(s) | 299 |
| Tsp45I | GTSAC | 1 cut(s) | 95 |
| TspRI | CASTG | 1 cut(s) | 257 |
| VpaK11BI | GGWCC | 1 cut(s) | 84 |