Rhodanese-like domain-containing protein 4A
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G25480 |
| fragaria_vesca | FvH4_2g17470 |
| malus_domestica | MD05G1153600.v1.1 MD10G1147900.v1.1 |
| prunus_persica | Prupe.8G187000_v2.0.a1 |
| pyrus_communis | pycom05g14800 pycom10g12800 |
| rosa_chinensis | RchiOBHm_Chr3g0456441 RchiOBHm_Chr6g0282201 RchiOBHm_Chr6g0284601 |
| rosa_laevigata | RLG00000012902 RLG00000025305 |
| rosa_multiflora | Rmu_sc0011940.1_g000009 Rmu_sc0014549.1_g000007 |
| rosa_rugosa | Rorug06G0146100 |
| rosa_samantha | Rh6AG259300 Rh6BG262600 Rh6CG261500 Rh6DG253600 |
| rosa_wichuraiana | Rw3G006290 Rw6G022430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 228, 261 |
| AfaI | GTAC | 2 cut(s) | 338, 384 |
| AgsI | TTSAA | 6 cut(s) | 130, 146, 257, 331, 395, 508 |
| AjnI | CCWGG | 1 cut(s) | 306 |
| AluBI | AGCT | 3 cut(s) | 214, 266, 454 |
| AluI | AGCT | 3 cut(s) | 214, 266, 454 |
| Alw21I | GWGCWC | 1 cut(s) | 216 |
| Alw26I | GTCTC | 4 cut(s) | 12, 316, 501, 588 |
| ApeKI | GCWGC | 1 cut(s) | 263 |
| AspA2I | CCTAGG | 1 cut(s) | 598 |
| AspS9I | GGNCC | 2 cut(s) | 19, 439 |
| AsuHPI | GGTGA | 1 cut(s) | 106 |
| AvaII | GGWCC | 2 cut(s) | 19, 439 |
| AvrII | CCTAGG | 1 cut(s) | 598 |
| BanII | GRGCYC | 1 cut(s) | 216 |
| Bbv12I | GWGCWC | 1 cut(s) | 216 |
| BbvI | GCAGC | 1 cut(s) | 275 |
| BccI | CCATC | 4 cut(s) | 144, 164, 198, 554 |
| BciT130I | CCWGG | 1 cut(s) | 308 |
| BciVI | GTATCC | 1 cut(s) | 517 |
| BcoDI | GTCTC | 4 cut(s) | 12, 316, 501, 588 |
| BfaI | CTAG | 1 cut(s) | 599 |
| BfmI | CTRYAG | 1 cut(s) | 387 |
| BfuI | GTATCC | 1 cut(s) | 517 |
| BisI | GCNGC | 2 cut(s) | 261, 264 |
| BlnI | CCTAGG | 1 cut(s) | 598 |
| BlpI | GCTNAGC | 1 cut(s) | 450 |
| BlsI | GCNGC | 2 cut(s) | 262, 265 |
| Bme1390I | CCNGG | 1 cut(s) | 308 |
| Bme18I | GGWCC | 2 cut(s) | 19, 439 |
| BmgT120I | GGNCC | 2 cut(s) | 19, 439 |
| BmrFI | CCNGG | 1 cut(s) | 308 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 450 |
| BpuEI | CTTGAG | 1 cut(s) | 424 |
| BsaI | GGTCTC | 3 cut(s) | 316, 501, 588 |
| BsaJI | CCNNGG | 2 cut(s) | 15, 598 |
| Bse118I | RCCGGY | 1 cut(s) | 353 |
| Bse3DI | GCAATG | 1 cut(s) | 348 |
| BseBI | CCWGG | 1 cut(s) | 308 |
| BseDI | CCNNGG | 2 cut(s) | 15, 598 |
| BseGI | GGATG | 2 cut(s) | 136, 556 |
| BseMI | GCAATG | 1 cut(s) | 348 |
| BseMII | CTCAG | 2 cut(s) | 201, 464 |
| BseRI | GAGGAG | 1 cut(s) | 194 |
| BseXI | GCAGC | 1 cut(s) | 275 |
| BsiHKAI | GWGCWC | 1 cut(s) | 216 |
| BsiSI | CCGG | 1 cut(s) | 354 |
| BslFI | GGGAC | 1 cut(s) | 482 |
| BsmAI | GTCTC | 4 cut(s) | 12, 316, 501, 588 |
| BsmFI | GGGAC | 1 cut(s) | 482 |
| Bso31I | GGTCTC | 3 cut(s) | 316, 501, 588 |
| Bsp1286I | GDGCHC | 1 cut(s) | 216 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 450 |
| Bsp19I | CCATGG | 1 cut(s) | 15 |
| BspACI | CCGC | 2 cut(s) | 228, 261 |
| BspCNI | CTCAG | 2 cut(s) | 202, 463 |
| BspTNI | GGTCTC | 3 cut(s) | 316, 501, 588 |
| BsrDI | GCAATG | 1 cut(s) | 348 |
| BsrFI | RCCGGY | 1 cut(s) | 353 |
| BssAI | RCCGGY | 1 cut(s) | 353 |
| BssECI | CCNNGG | 2 cut(s) | 15, 598 |
| BssT1I | CCWWGG | 2 cut(s) | 15, 598 |
| Bst2UI | CCWGG | 1 cut(s) | 308 |
| Bst4CI | ACNGT | 2 cut(s) | 529, 610 |
| Bst6I | CTCTTC | 2 cut(s) | 99, 470 |
| BstDEI | CTNAG | 2 cut(s) | 210, 450 |
| BstDSI | CCRYGG | 1 cut(s) | 15 |
| BstF5I | GGATG | 2 cut(s) | 136, 556 |
| BstMAI | GTCTC | 4 cut(s) | 12, 316, 501, 588 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 227 |
| BstNI | CCWGG | 1 cut(s) | 308 |
| BstSCI | CCNGG | 1 cut(s) | 306 |
| BstSFI | CTRYAG | 1 cut(s) | 387 |
| BstV1I | GCAGC | 1 cut(s) | 275 |
| BsuI | GTATCC | 1 cut(s) | 517 |
| BtgI | CCRYGG | 1 cut(s) | 15 |
| BtgZI | GCGATG | 1 cut(s) | 202 |
| BtsCI | GGATG | 2 cut(s) | 136, 556 |
| BtsI | GCAGTG | 1 cut(s) | 444 |
| BtsIMutI | CAGTG | 3 cut(s) | 207, 444, 606 |
| Cfr10I | RCCGGY | 1 cut(s) | 353 |
| Cfr13I | GGNCC | 2 cut(s) | 19, 439 |
| Csp6I | GTAC | 2 cut(s) | 337, 383 |
| CviAII | CATG | 1 cut(s) | 16 |
| CviJI | RGCY | 4 cut(s) | 214, 260, 266, 454 |
| CviKI_1 | RGCY | 4 cut(s) | 214, 260, 266, 454 |
| CviQI | GTAC | 2 cut(s) | 337, 383 |
| DdeI | CTNAG | 2 cut(s) | 210, 450 |
| Eam1104I | CTCTTC | 2 cut(s) | 99, 470 |
| EarI | CTCTTC | 2 cut(s) | 99, 470 |
| Ecl136II | GAGCTC | 1 cut(s) | 214 |
| Eco130I | CCWWGG | 2 cut(s) | 15, 598 |
| Eco24I | GRGCYC | 1 cut(s) | 216 |
| Eco31I | GGTCTC | 3 cut(s) | 316, 501, 588 |
| Eco47I | GGWCC | 2 cut(s) | 19, 439 |
| Eco53kI | GAGCTC | 1 cut(s) | 214 |
| EcoICRI | GAGCTC | 1 cut(s) | 214 |
| EcoO109I | RGGNCCY | 1 cut(s) | 439 |
| EcoRII | CCWGG | 1 cut(s) | 306 |
| EcoT14I | CCWWGG | 2 cut(s) | 15, 598 |
| EcoT38I | GRGCYC | 1 cut(s) | 216 |
| ErhI | CCWWGG | 2 cut(s) | 15, 598 |
| FaeI | CATG | 1 cut(s) | 19 |
| FaiI | YATR | 4 cut(s) | 17, 343, 362, 414 |
| FaqI | GGGAC | 1 cut(s) | 482 |
| FatI | CATG | 1 cut(s) | 15 |
| Fnu4HI | GCNGC | 2 cut(s) | 261, 264 |
| FokI | GGATG | 2 cut(s) | 123, 563 |
| FriOI | GRGCYC | 1 cut(s) | 216 |
| Fsp4HI | GCNGC | 2 cut(s) | 261, 264 |
| FspBI | CTAG | 1 cut(s) | 599 |
| GluI | GCNGC | 2 cut(s) | 261, 264 |
| HapII | CCGG | 1 cut(s) | 354 |
| Hin1II | CATG | 1 cut(s) | 19 |
| HinfI | GANTC | 2 cut(s) | 5, 299 |
| HpaII | CCGG | 1 cut(s) | 354 |
| HphI | GGTGA | 1 cut(s) | 106 |
| Hpy166II | GTNNAC | 1 cut(s) | 383 |
| Hpy188I | TCNGA | 3 cut(s) | 271, 547, 593 |
| Hpy188III | TCNNGA | 3 cut(s) | 395, 424, 624 |
| Hpy8I | GTNNAC | 1 cut(s) | 383 |
| HpyAV | CCTTC | 5 cut(s) | 152, 252, 430, 526, 568 |
| HpyCH4III | ACNGT | 2 cut(s) | 529, 610 |
| HpyCH4V | TGCA | 1 cut(s) | 583 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 227 |
| HpyF3I | CTNAG | 2 cut(s) | 210, 450 |
| Hsp92II | CATG | 1 cut(s) | 19 |
| LpnPI | CCDG | 7 cut(s) | 40, 77, 293, 320, 367, 399, 437 |
| Lsp1109I | GCAGC | 1 cut(s) | 275 |
| MaeI | CTAG | 1 cut(s) | 599 |
| MboII | GAAGA | 5 cut(s) | 24, 86, 487, 520, 569 |
| MfeI | CAATTG | 1 cut(s) | 315 |
| MhlI | GDGCHC | 1 cut(s) | 216 |
| MluCI | AATT | 2 cut(s) | 146, 315 |
| MlyI | GAGTC | 2 cut(s) | 14, 308 |
| MspI | CCGG | 1 cut(s) | 354 |
| MspR9I | CCNGG | 1 cut(s) | 308 |
| MunI | CAATTG | 1 cut(s) | 315 |
| MvaI | CCWGG | 1 cut(s) | 308 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 227 |
| NcoI | CCATGG | 1 cut(s) | 15 |
| NlaIII | CATG | 1 cut(s) | 19 |
| PkrI | GCNGC | 2 cut(s) | 262, 265 |
| PleI | GAGTC | 2 cut(s) | 13, 307 |
| PpsI | GAGTC | 2 cut(s) | 13, 307 |
| PpuMI | RGGWCCY | 1 cut(s) | 439 |
| Psp124BI | GAGCTC | 1 cut(s) | 216 |
| Psp5II | RGGWCCY | 1 cut(s) | 439 |
| Psp6I | CCWGG | 1 cut(s) | 306 |
| PspGI | CCWGG | 1 cut(s) | 306 |
| PspPI | GGNCC | 2 cut(s) | 19, 439 |
| PspPPI | RGGWCCY | 1 cut(s) | 439 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 375, 407 |
| RsaI | GTAC | 2 cut(s) | 338, 384 |
| RsaNI | GTAC | 2 cut(s) | 337, 383 |
| SacI | GAGCTC | 1 cut(s) | 216 |
| SatI | GCNGC | 2 cut(s) | 261, 264 |
| Sau96I | GGNCC | 2 cut(s) | 19, 439 |
| SchI | GAGTC | 2 cut(s) | 14, 308 |
| ScrFI | CCNGG | 1 cut(s) | 308 |
| SduI | GDGCHC | 1 cut(s) | 216 |
| SfcI | CTRYAG | 1 cut(s) | 387 |
| SinI | GGWCC | 2 cut(s) | 19, 439 |
| SmlI | CTYRAG | 1 cut(s) | 403 |
| SmoI | CTYRAG | 1 cut(s) | 403 |
| Sse9I | AATT | 2 cut(s) | 146, 315 |
| SsiI | CCGC | 2 cut(s) | 228, 261 |
| SspMI | CTAG | 1 cut(s) | 599 |
| SstI | GAGCTC | 1 cut(s) | 216 |
| StyD4I | CCNGG | 1 cut(s) | 306 |
| StyI | CCWWGG | 2 cut(s) | 15, 598 |
| TaaI | ACNGT | 2 cut(s) | 529, 610 |
| TaqI | TCGA | 1 cut(s) | 623 |
| TasI | AATT | 2 cut(s) | 146, 315 |
| TauI | GCSGC | 1 cut(s) | 263 |
| TscAI | CASTG | 3 cut(s) | 214, 451, 613 |
| TseI | GCWGC | 1 cut(s) | 263 |
| TspDTI | ATGAA | 3 cut(s) | 337, 355, 570 |
| TspRI | CASTG | 3 cut(s) | 214, 451, 613 |
| VpaK11BI | GGWCC | 2 cut(s) | 19, 439 |
| XmaJI | CCTAGG | 1 cut(s) | 598 |
| XspI | CTAG | 1 cut(s) | 599 |