DNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G57300 AT3G57300 AT3G57300 AT3G57300 |
| fragaria_vesca | FvH4_6g24570 FvH4_6g24570 FvH4_6g24570 FvH4_6g24570 FvH4_6g24570 FvH4_6g24570 FvH4_6g24570 |
| malus_domestica | MD03G1136600.v1.1 MD11G1158800.v1.1 |
| prunus_persica | Prupe.7G053300_v2.0.a1 Prupe.7G053300_v2.0.a1 |
| pyrus_communis | pycom03g09240 pycom11g12930 |
| rosa_chinensis | RchiOBHm_Chr3g0483871 |
| rosa_laevigata | RLG00000023256 |
| rosa_multiflora | Rmu_sc0005901.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00398080 |
| rosa_rugosa | Rorug03G0208400 Rorug03G0208500 |
| rosa_samantha | Rh3AG257100 Rh3BG293500 Rh3CG291800 Rh3DG286900 |
| rosa_wichuraiana | Rw3G023240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1328 |
| AccB1I | GGYRCC | 2 cut(s) | 12, 1648 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1783, 1858, 2726 |
| AccBSI | CCGCTC | 1 cut(s) | 3037 |
| AccI | GTMKAC | 2 cut(s) | 933, 2853 |
| AccII | CGCG | 2 cut(s) | 189, 3436 |
| AciI | CCGC | 8 cut(s) | 187, 217, 531, 746, 1123, 2360, 2894, 3037 |
| AclI | AACGTT | 2 cut(s) | 2825, 2963 |
| AclWI | GGATC | 5 cut(s) | 182, 687, 700, 1010, 2994 |
| AcoI | YGGCCR | 1 cut(s) | 3219 |
| AcsI | RAATTY | 5 cut(s) | 196, 859, 2595, 2704, 2815 |
| AcuI | CTGAAG | 4 cut(s) | 767, 1467, 1559, 2496 |
| AcyI | GRCGYC | 1 cut(s) | 13 |
| AdeI | CACNNNGTG | 1 cut(s) | 527 |
| AfaI | GTAC | 9 cut(s) | 317, 679, 1008, 2019, 2242, 2374, 2745, 3238, 3401 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 22, 877, 1783, 1858, 1994, 2726, 3001, 3248 |
| AflIII | ACRYGT | 2 cut(s) | 1248, 3164 |
| AhlI | ACTAGT | 1 cut(s) | 1595 |
| AjiI | CACGTC | 1 cut(s) | 456 |
| AjnI | CCWGG | 6 cut(s) | 490, 1836, 1851, 2465, 3229, 3404 |
| AleI | CACNNNNGTG | 1 cut(s) | 2691 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3319, 3351 |
| Alw21I | GWGCWC | 3 cut(s) | 2388, 2490, 3337 |
| Alw26I | GTCTC | 8 cut(s) | 225, 954, 1077, 1156, 1239, 1354, 3265, 3463 |
| Alw44I | GTGCAC | 1 cut(s) | 2486 |
| AlwI | GGATC | 5 cut(s) | 182, 687, 700, 1010, 2994 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1783 |
| Ama87I | CYCGRG | 1 cut(s) | 2752 |
| AoxI | GGCC | 9 cut(s) | 731, 798, 1771, 1834, 1854, 1901, 1999, 2274, 3219 |
| ApaI | GGGCCC | 1 cut(s) | 2278 |
| ApaLI | GTGCAC | 1 cut(s) | 2486 |
| ApeKI | GCWGC | 7 cut(s) | 161, 881, 1217, 1559, 1624, 2230, 3129 |
| ApoI | RAATTY | 5 cut(s) | 196, 859, 2595, 2704, 2815 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 306, 2117, 2420, 2865, 3022 |
| AspLEI | GCGC | 4 cut(s) | 15, 520, 1329, 3436 |
| AsuC2I | CCSGG | 1 cut(s) | 3341 |
| AsuHPI | GGTGA | 6 cut(s) | 628, 1112, 2117, 2705, 2883, 3421 |
| AsuII | TTCGAA | 1 cut(s) | 398 |
| AvaI | CYCGRG | 1 cut(s) | 2752 |
| AvaII | GGWCC | 5 cut(s) | 4, 2782, 3064, 3227, 3455 |
| AxyI | CCTNAGG | 1 cut(s) | 1644 |
| BaeGI | GKGCMC | 2 cut(s) | 2278, 2490 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3383, 3416 |
| BalI | TGGCCA | 1 cut(s) | 3221 |
| BamHI | GGATCC | 1 cut(s) | 692 |
| BanI | GGYRCC | 2 cut(s) | 12, 1648 |
| BanII | GRGCYC | 3 cut(s) | 762, 2278, 3337 |
| BbsI | GAAGAC | 2 cut(s) | 1455, 2201 |
| Bbv12I | GWGCWC | 3 cut(s) | 2388, 2490, 3337 |
| BbvCI | CCTCAGC | 1 cut(s) | 1881 |
| BbvI | GCAGC | 7 cut(s) | 148, 893, 1204, 1546, 1611, 2217, 3141 |
| BceAI | ACGGC | 1 cut(s) | 133 |
| BciT130I | CCWGG | 6 cut(s) | 492, 1838, 1853, 2467, 3231, 3406 |
| BcnI | CCSGG | 1 cut(s) | 3341 |
| BcoDI | GTCTC | 8 cut(s) | 225, 954, 1077, 1156, 1239, 1354, 3265, 3463 |
| BcuI | ACTAGT | 1 cut(s) | 1595 |
| BfaI | CTAG | 5 cut(s) | 1238, 1596, 2099, 3254, 3330 |
| BfmI | CTRYAG | 4 cut(s) | 1458, 2835, 2854, 2997 |
| BfoI | RGCGCY | 1 cut(s) | 16 |
| BglII | AGATCT | 1 cut(s) | 3188 |
| BisI | GCNGC | 9 cut(s) | 162, 531, 882, 1218, 1560, 1625, 2231, 3038, 3130 |
| BlpI | GCTNAGC | 2 cut(s) | 2204, 2553 |
| BlsI | GCNGC | 9 cut(s) | 163, 532, 883, 1219, 1561, 1626, 2232, 3039, 3131 |
| Bme1390I | CCNGG | 7 cut(s) | 492, 1838, 1853, 2467, 3231, 3341, 3406 |
| Bme18I | GGWCC | 5 cut(s) | 4, 2782, 3064, 3227, 3455 |
| BmeT110I | CYCGRG | 1 cut(s) | 2752 |
| BmgBI | CACGTC | 1 cut(s) | 456 |
| BmrFI | CCNGG | 7 cut(s) | 492, 1838, 1853, 2467, 3231, 3341, 3406 |
| BmrI | ACTGGG | 2 cut(s) | 763, 1951 |
| BmsI | GCATC | 8 cut(s) | 496, 1105, 1129, 1558, 1824, 2050, 2587, 3168 |
| BmuI | ACTGGG | 2 cut(s) | 763, 1951 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1614 |
| BpiI | GAAGAC | 2 cut(s) | 1455, 2201 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 205, 237, 2321, 2353, 2918, 2950 |
| BpmI | CTGGAG | 4 cut(s) | 1358, 1686, 1760, 2795 |
| Bpu10I | CCTNAGC | 2 cut(s) | 697, 1881 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2204, 2553 |
| Bpu14I | TTCGAA | 1 cut(s) | 398 |
| BpuEI | CTTGAG | 3 cut(s) | 83, 1548, 3158 |
| BpuMI | CCSGG | 1 cut(s) | 3341 |
| Bsa29I | ATCGAT | 1 cut(s) | 2908 |
| BsaAI | YACGTR | 1 cut(s) | 3167 |
| BsaHI | GRCGYC | 1 cut(s) | 13 |
| BsaI | GGTCTC | 2 cut(s) | 225, 1156 |
| BsaWI | WCCGGW | 1 cut(s) | 373 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3319, 3349 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 22, 877, 1783, 1858, 1994, 2726, 3001, 3248 |
| Bse118I | RCCGGY | 1 cut(s) | 3066 |
| Bse1I | ACTGG | 9 cut(s) | 16, 618, 769, 1777, 1946, 2092, 2242, 3025, 3229 |
| Bse21I | CCTNAGG | 1 cut(s) | 1644 |
| Bse3DI | GCAATG | 1 cut(s) | 3352 |
| BseBI | CCWGG | 6 cut(s) | 492, 1838, 1853, 2467, 3231, 3406 |
| BseCI | ATCGAT | 1 cut(s) | 2908 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 22, 877, 1783, 1858, 1994, 2726, 3001, 3248 |
| BseMI | GCAATG | 1 cut(s) | 3352 |
| BseNI | ACTGG | 9 cut(s) | 16, 618, 769, 1777, 1946, 2092, 2242, 3025, 3229 |
| BseRI | GAGGAG | 8 cut(s) | 25, 28, 254, 444, 1355, 1483, 1898, 3464 |
| BseSI | GKGCMC | 2 cut(s) | 2278, 2490 |
| BseXI | GCAGC | 7 cut(s) | 148, 893, 1204, 1546, 1611, 2217, 3141 |
| BseYI | CCCAGC | 1 cut(s) | 2063 |
| BsgI | GTGCAG | 1 cut(s) | 336 |
| Bsh1236I | CGCG | 2 cut(s) | 189, 3436 |
| Bsh1285I | CGRYCG | 1 cut(s) | 187 |
| BshFI | GGCC | 9 cut(s) | 733, 800, 1773, 1836, 1856, 1903, 2001, 2276, 3221 |
| BshNI | GGYRCC | 2 cut(s) | 12, 1648 |
| BshVI | ATCGAT | 1 cut(s) | 2908 |
| BsiEI | CGRYCG | 1 cut(s) | 187 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2388, 2490, 3337 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2752 |
| BsiSI | CCGG | 4 cut(s) | 374, 2122, 3067, 3341 |
| BslFI | GGGAC | 6 cut(s) | 274, 763, 2768, 2977, 3077, 3284 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 22, 877, 1783, 1858, 1994, 2726, 3001, 3248 |
| BsmAI | GTCTC | 8 cut(s) | 225, 954, 1077, 1156, 1239, 1354, 3265, 3463 |
| BsmFI | GGGAC | 6 cut(s) | 274, 763, 2768, 2977, 3077, 3284 |
| BsmI | GAATGC | 2 cut(s) | 2404, 3131 |
| BsnI | GGCC | 9 cut(s) | 733, 800, 1773, 1836, 1856, 1903, 2001, 2276, 3221 |
| Bso31I | GGTCTC | 2 cut(s) | 225, 1156 |
| BsoBI | CYCGRG | 1 cut(s) | 2752 |
| Bsp119I | TTCGAA | 1 cut(s) | 398 |
| Bsp120I | GGGCCC | 1 cut(s) | 2274 |
| Bsp1286I | GDGCHC | 5 cut(s) | 762, 2278, 2388, 2490, 3337 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2204, 2553 |
| Bsp19I | CCATGG | 2 cut(s) | 1857, 3108 |
| BspACI | CCGC | 8 cut(s) | 187, 217, 531, 746, 1123, 2360, 2894, 3037 |
| BspANI | GGCC | 9 cut(s) | 733, 800, 1773, 1836, 1856, 1903, 2001, 2276, 3221 |
| BspDI | ATCGAT | 1 cut(s) | 2908 |
| BspFNI | CGCG | 2 cut(s) | 189, 3436 |
| BspHI | TCATGA | 1 cut(s) | 2314 |
| BspMAI | CTGCAG | 2 cut(s) | 2839, 3001 |
| BspPI | GGATC | 5 cut(s) | 182, 687, 700, 1010, 2994 |
| BspT104I | TTCGAA | 1 cut(s) | 398 |
| BspT107I | GGYRCC | 2 cut(s) | 12, 1648 |
| BspTNI | GGTCTC | 2 cut(s) | 225, 1156 |
| BsrBI | CCGCTC | 1 cut(s) | 3037 |
| BsrDI | GCAATG | 1 cut(s) | 3352 |
| BsrFI | RCCGGY | 1 cut(s) | 3066 |
| BsrI | ACTGG | 9 cut(s) | 16, 618, 769, 1777, 1946, 2092, 2242, 3025, 3229 |
| BssAI | RCCGGY | 1 cut(s) | 3066 |
| BssNI | GRCGYC | 1 cut(s) | 13 |
| BssT1I | CCWWGG | 4 cut(s) | 21, 151, 1857, 3108 |
| Bst2UI | CCWGG | 6 cut(s) | 492, 1838, 1853, 2467, 3231, 3406 |
| Bst6I | CTCTTC | 7 cut(s) | 59, 1051, 1075, 1259, 1989, 2715, 3407 |
| BstACI | GRCGYC | 1 cut(s) | 13 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3005 |
| BstBAI | YACGTR | 1 cut(s) | 3167 |
| BstBI | TTCGAA | 1 cut(s) | 398 |
| BstC8I | GCNNGC | 3 cut(s) | 414, 1127, 1331 |
| BstDSI | CCRYGG | 2 cut(s) | 1857, 3108 |
| BstFNI | CGCG | 2 cut(s) | 189, 3436 |
| BstH2I | RGCGCY | 1 cut(s) | 16 |
| BstHHI | GCGC | 4 cut(s) | 15, 520, 1329, 3436 |
| BstMAI | GTCTC | 8 cut(s) | 225, 954, 1077, 1156, 1239, 1354, 3265, 3463 |
| BstMCI | CGRYCG | 1 cut(s) | 187 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 91, 147, 515, 1556, 1568, 1868, 1877, 2425, 3005 |
| BstNI | CCWGG | 6 cut(s) | 492, 1838, 1853, 2467, 3231, 3406 |
| BstNSI | RCATGY | 1 cut(s) | 1252 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1614 |
| BstSCI | CCNGG | 7 cut(s) | 490, 1836, 1851, 2465, 3229, 3339, 3404 |
| BstSFI | CTRYAG | 4 cut(s) | 1458, 2835, 2854, 2997 |
| BstSLI | GKGCMC | 2 cut(s) | 2278, 2490 |
| BstUI | CGCG | 2 cut(s) | 189, 3436 |
| BstV1I | GCAGC | 7 cut(s) | 148, 893, 1204, 1546, 1611, 2217, 3141 |
| BstV2I | GAAGAC | 2 cut(s) | 1455, 2201 |
| BstX2I | RGATCY | 4 cut(s) | 692, 1015, 2986, 3188 |
| BstYI | RGATCY | 4 cut(s) | 692, 1015, 2986, 3188 |
| Bsu15I | ATCGAT | 1 cut(s) | 2908 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1644 |
| BsuRI | GGCC | 9 cut(s) | 733, 800, 1773, 1836, 1856, 1903, 2001, 2276, 3221 |
| BsuTUI | ATCGAT | 1 cut(s) | 2908 |
| BtgI | CCRYGG | 2 cut(s) | 1857, 3108 |
| BtrI | CACGTC | 1 cut(s) | 456 |
| BtsI | GCAGTG | 2 cut(s) | 2198, 2488 |
| BtsIMutI | CAGTG | 6 cut(s) | 235, 1784, 2198, 2488, 2863, 3222 |
| Cac8I | GCNNGC | 3 cut(s) | 414, 1127, 1331 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1783 |
| CciI | TCATGA | 1 cut(s) | 2314 |
| CfoI | GCGC | 4 cut(s) | 15, 520, 1329, 3436 |
| Cfr10I | RCCGGY | 1 cut(s) | 3066 |
| ClaI | ATCGAT | 1 cut(s) | 2908 |
| CseI | GACGC | 2 cut(s) | 271, 1322 |
| CsiI | ACCWGGT | 1 cut(s) | 3229 |
| Csp6I | GTAC | 9 cut(s) | 316, 678, 1007, 2018, 2241, 2373, 2744, 3237, 3400 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2554, 2589 |
| CviQI | GTAC | 9 cut(s) | 316, 678, 1007, 2018, 2241, 2373, 2744, 3237, 3400 |
| DinI | GGCGCC | 1 cut(s) | 14 |
| DraI | TTTAAA | 1 cut(s) | 1809 |
| DraIII | CACNNNGTG | 1 cut(s) | 527 |
| EaeI | YGGCCR | 1 cut(s) | 3219 |
| Eam1104I | CTCTTC | 7 cut(s) | 59, 1051, 1075, 1259, 1989, 2715, 3407 |
| EarI | CTCTTC | 7 cut(s) | 59, 1051, 1075, 1259, 1989, 2715, 3407 |
| Ecl136II | GAGCTC | 1 cut(s) | 3335 |
| Eco130I | CCWWGG | 4 cut(s) | 21, 151, 1857, 3108 |
| Eco147I | AGGCCT | 2 cut(s) | 800, 1773 |
| Eco24I | GRGCYC | 3 cut(s) | 762, 2278, 3337 |
| Eco31I | GGTCTC | 2 cut(s) | 225, 1156 |
| Eco32I | GATATC | 1 cut(s) | 2544 |
| Eco47I | GGWCC | 5 cut(s) | 4, 2782, 3064, 3227, 3455 |
| Eco53kI | GAGCTC | 1 cut(s) | 3335 |
| Eco57I | CTGAAG | 4 cut(s) | 767, 1467, 1559, 2496 |
| Eco81I | CCTNAGG | 1 cut(s) | 1644 |
| Eco88I | CYCGRG | 1 cut(s) | 2752 |
| EcoICRI | GAGCTC | 1 cut(s) | 3335 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1901, 2275, 2782 |
| EcoRI | GAATTC | 3 cut(s) | 196, 859, 2815 |
| EcoRII | CCWGG | 6 cut(s) | 490, 1836, 1851, 2465, 3229, 3404 |
| EcoRV | GATATC | 1 cut(s) | 2544 |
| EcoT14I | CCWWGG | 4 cut(s) | 21, 151, 1857, 3108 |
| EcoT38I | GRGCYC | 3 cut(s) | 762, 2278, 3337 |
| EgeI | GGCGCC | 1 cut(s) | 14 |
| EheI | GGCGCC | 1 cut(s) | 14 |
| ErhI | CCWWGG | 4 cut(s) | 21, 151, 1857, 3108 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1734, 1766 |
| FaqI | GGGAC | 6 cut(s) | 274, 763, 2768, 2977, 3077, 3284 |
| FauI | CCCGC | 1 cut(s) | 739 |
| FauNDI | CATATG | 1 cut(s) | 967 |
| FblI | GTMKAC | 2 cut(s) | 933, 2853 |
| Fnu4HI | GCNGC | 9 cut(s) | 162, 531, 882, 1218, 1560, 1625, 2231, 3038, 3130 |
| FriOI | GRGCYC | 3 cut(s) | 762, 2278, 3337 |
| Fsp4HI | GCNGC | 9 cut(s) | 162, 531, 882, 1218, 1560, 1625, 2231, 3038, 3130 |
| FspBI | CTAG | 5 cut(s) | 1238, 1596, 2099, 3254, 3330 |
| FspI | TGCGCA | 1 cut(s) | 1328 |
| GlaI | GCGC | 4 cut(s) | 14, 519, 1328, 3435 |
| GluI | GCNGC | 9 cut(s) | 162, 531, 882, 1218, 1560, 1625, 2231, 3038, 3130 |
| GsaI | CCCAGC | 1 cut(s) | 2067 |
| GsuI | CTGGAG | 4 cut(s) | 1358, 1686, 1760, 2795 |
| HaeII | RGCGCY | 1 cut(s) | 16 |
| HaeIII | GGCC | 9 cut(s) | 733, 800, 1773, 1836, 1856, 1903, 2001, 2276, 3221 |
| HapII | CCGG | 4 cut(s) | 374, 2122, 3067, 3341 |
| HgaI | GACGC | 2 cut(s) | 271, 1322 |
| HhaI | GCGC | 4 cut(s) | 15, 520, 1329, 3436 |
| Hin1I | GRCGYC | 1 cut(s) | 13 |
| Hin6I | GCGC | 4 cut(s) | 13, 518, 1327, 3434 |
| HinP1I | GCGC | 4 cut(s) | 13, 518, 1327, 3434 |
| HincII | GTYRAC | 1 cut(s) | 1593 |
| HindII | GTYRAC | 1 cut(s) | 1593 |
| HindIII | AAGCTT | 1 cut(s) | 2514 |
| HpaI | GTTAAC | 1 cut(s) | 1593 |
| HpaII | CCGG | 4 cut(s) | 374, 2122, 3067, 3341 |
| HphI | GGTGA | 6 cut(s) | 628, 1112, 2117, 2705, 2883, 3421 |
| Hpy99I | CGWCG | 1 cut(s) | 2436 |
| HpyCH4IV | ACGT | 5 cut(s) | 455, 2742, 2825, 2963, 3166 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 91, 147, 515, 1556, 1568, 1868, 1877, 2425, 3005 |
| HpySE526I | ACGT | 5 cut(s) | 455, 2742, 2825, 2963, 3166 |
| Hsp92I | GRCGYC | 1 cut(s) | 13 |
| HspAI | GCGC | 4 cut(s) | 13, 518, 1327, 3434 |
| KasI | GGCGCC | 1 cut(s) | 12 |
| KspAI | GTTAAC | 1 cut(s) | 1593 |
| Lsp1109I | GCAGC | 7 cut(s) | 148, 893, 1204, 1546, 1611, 2217, 3141 |
| LweI | GCATC | 8 cut(s) | 496, 1105, 1129, 1558, 1824, 2050, 2587, 3168 |
| MabI | ACCWGGT | 1 cut(s) | 3229 |
| MaeI | CTAG | 5 cut(s) | 1238, 1596, 2099, 3254, 3330 |
| MaeII | ACGT | 5 cut(s) | 455, 2742, 2825, 2963, 3166 |
| MaeIII | GTNAC | 6 cut(s) | 616, 1251, 1409, 1708, 2479, 3160 |
| MbiI | CCGCTC | 1 cut(s) | 3037 |
| MflI | RGATCY | 4 cut(s) | 692, 1015, 2986, 3188 |
| MhlI | GDGCHC | 5 cut(s) | 762, 2278, 2388, 2490, 3337 |
| MlsI | TGGCCA | 1 cut(s) | 3221 |
| MluNI | TGGCCA | 1 cut(s) | 3221 |
| Mly113I | GGCGCC | 1 cut(s) | 13 |
| MlyI | GAGTC | 4 cut(s) | 785, 1368, 2927, 3465 |
| MmeI | TCCRAC | 4 cut(s) | 72, 207, 2715, 2932 |
| Mox20I | TGGCCA | 1 cut(s) | 3221 |
| MroXI | GAANNNNTTC | 5 cut(s) | 306, 2117, 2420, 2865, 3022 |
| MscI | TGGCCA | 1 cut(s) | 3221 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2583, 2691, 3098 |
| Msp20I | TGGCCA | 1 cut(s) | 3221 |
| MspA1I | CMGCKG | 2 cut(s) | 533, 884 |
| MspI | CCGG | 4 cut(s) | 374, 2122, 3067, 3341 |
| MspR9I | CCNGG | 7 cut(s) | 492, 1838, 1853, 2467, 3231, 3341, 3406 |
| Mva1269I | GAATGC | 2 cut(s) | 2404, 3131 |
| MvaI | CCWGG | 6 cut(s) | 492, 1838, 1853, 2467, 3231, 3406 |
| MvnI | CGCG | 2 cut(s) | 189, 3436 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 91, 147, 515, 1556, 1568, 1868, 1877, 2425, 3005 |
| NarI | GGCGCC | 1 cut(s) | 13 |
| NciI | CCSGG | 1 cut(s) | 3341 |
| NcoI | CCATGG | 2 cut(s) | 1857, 3108 |
| NdeI | CATATG | 1 cut(s) | 967 |
| NmeAIII | GCCGAG | 2 cut(s) | 660, 2485 |
| NmuCI | GTSAC | 2 cut(s) | 616, 1409 |
| NsbI | TGCGCA | 1 cut(s) | 1328 |
| NspI | RCATGY | 1 cut(s) | 1252 |
| NspV | TTCGAA | 1 cut(s) | 398 |
| OliI | CACNNNNGTG | 1 cut(s) | 2691 |
| PagI | TCATGA | 1 cut(s) | 2314 |
| PasI | CCCWGGG | 1 cut(s) | 3405 |
| PceI | AGGCCT | 2 cut(s) | 800, 1773 |
| PciI | ACATGT | 1 cut(s) | 1248 |
| PctI | GAATGC | 2 cut(s) | 2404, 3131 |
| PdmI | GAANNNNTTC | 5 cut(s) | 306, 2117, 2420, 2865, 3022 |
| PfeI | GAWTC | 7 cut(s) | 26, 335, 370, 592, 1520, 2861, 3119 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1783, 1858, 2726 |
| PkrI | GCNGC | 9 cut(s) | 163, 532, 883, 1219, 1561, 1626, 2232, 3039, 3131 |
| PleI | GAGTC | 4 cut(s) | 784, 1368, 2927, 3465 |
| PluTI | GGCGCC | 1 cut(s) | 16 |
| PpsI | GAGTC | 4 cut(s) | 784, 1368, 2927, 3465 |
| Ppu21I | YACGTR | 1 cut(s) | 3167 |
| PpuMI | RGGWCCY | 1 cut(s) | 2782 |
| PscI | ACATGT | 1 cut(s) | 1248 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1614 |
| Psp124BI | GAGCTC | 1 cut(s) | 3337 |
| Psp1406I | AACGTT | 2 cut(s) | 2825, 2963 |
| Psp5II | RGGWCCY | 1 cut(s) | 2782 |
| Psp6I | CCWGG | 6 cut(s) | 490, 1836, 1851, 2465, 3229, 3404 |
| PspFI | CCCAGC | 1 cut(s) | 2063 |
| PspGI | CCWGG | 6 cut(s) | 490, 1836, 1851, 2465, 3229, 3404 |
| PspOMI | GGGCCC | 1 cut(s) | 2274 |
| PspPPI | RGGWCCY | 1 cut(s) | 2782 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 379, 411, 972, 1004 |
| PstI | CTGCAG | 2 cut(s) | 2839, 3001 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1783 |
| PsuI | RGATCY | 4 cut(s) | 692, 1015, 2986, 3188 |
| PvuII | CAGCTG | 1 cut(s) | 884 |
| RsaI | GTAC | 9 cut(s) | 317, 679, 1008, 2019, 2242, 2374, 2745, 3238, 3401 |
| RsaNI | GTAC | 9 cut(s) | 316, 678, 1007, 2018, 2241, 2373, 2744, 3237, 3400 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2583, 2691, 3098 |
| SacI | GAGCTC | 1 cut(s) | 3337 |
| SatI | GCNGC | 9 cut(s) | 162, 531, 882, 1218, 1560, 1625, 2231, 3038, 3130 |
| SchI | GAGTC | 4 cut(s) | 785, 1368, 2927, 3465 |
| ScrFI | CCNGG | 7 cut(s) | 492, 1838, 1853, 2467, 3231, 3341, 3406 |
| SduI | GDGCHC | 5 cut(s) | 762, 2278, 2388, 2490, 3337 |
| SexAI | ACCWGGT | 1 cut(s) | 3229 |
| SfaNI | GCATC | 8 cut(s) | 496, 1105, 1129, 1558, 1824, 2050, 2587, 3168 |
| SfcI | CTRYAG | 4 cut(s) | 1458, 2835, 2854, 2997 |
| SfoI | GGCGCC | 1 cut(s) | 14 |
| SfuI | TTCGAA | 1 cut(s) | 398 |
| SinI | GGWCC | 5 cut(s) | 4, 2782, 3064, 3227, 3455 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2583, 2691, 3098 |
| SmlI | CTYRAG | 3 cut(s) | 62, 1563, 3137 |
| SmoI | CTYRAG | 3 cut(s) | 62, 1563, 3137 |
| SpeI | ACTAGT | 1 cut(s) | 1595 |
| SseBI | AGGCCT | 2 cut(s) | 800, 1773 |
| SsiI | CCGC | 8 cut(s) | 187, 217, 531, 746, 1123, 2360, 2894, 3037 |
| SspDI | GGCGCC | 1 cut(s) | 12 |
| SspI | AATATT | 3 cut(s) | 2614, 2916, 3289 |
| SspMI | CTAG | 5 cut(s) | 1238, 1596, 2099, 3254, 3330 |
| SstI | GAGCTC | 1 cut(s) | 3337 |
| StuI | AGGCCT | 2 cut(s) | 800, 1773 |
| StyD4I | CCNGG | 7 cut(s) | 490, 1836, 1851, 2465, 3229, 3339, 3404 |
| StyI | CCWWGG | 4 cut(s) | 21, 151, 1857, 3108 |
| TaiI | ACGT | 5 cut(s) | 458, 2745, 2828, 2966, 3169 |
| TaqI | TCGA | 8 cut(s) | 398, 404, 2218, 2408, 2434, 2908, 3305, 3364 |
| TatI | WGTACW | 1 cut(s) | 315 |
| TauI | GCSGC | 2 cut(s) | 533, 3040 |
| TfiI | GAWTC | 7 cut(s) | 26, 335, 370, 592, 1520, 2861, 3119 |
| TscAI | CASTG | 6 cut(s) | 235, 1784, 2205, 2495, 2863, 3229 |
| TseFI | GTSAC | 2 cut(s) | 616, 1409 |
| TseI | GCWGC | 7 cut(s) | 161, 881, 1217, 1559, 1624, 2230, 3129 |
| Tsp45I | GTSAC | 2 cut(s) | 616, 1409 |
| TspGWI | ACGGA | 3 cut(s) | 1977, 2420, 3290 |
| TspRI | CASTG | 6 cut(s) | 235, 1784, 2205, 2495, 2863, 3229 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1783, 1858, 2726 |
| VneI | GTGCAC | 1 cut(s) | 2486 |
| VpaK11BI | GGWCC | 5 cut(s) | 4, 2782, 3064, 3227, 3455 |
| XapI | RAATTY | 5 cut(s) | 196, 859, 2595, 2704, 2815 |
| XceI | RCATGY | 1 cut(s) | 1252 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1855, 1864 |
| XmiI | GTMKAC | 2 cut(s) | 933, 2853 |
| XmnI | GAANNNNTTC | 5 cut(s) | 306, 2117, 2420, 2865, 3022 |
| XspI | CTAG | 5 cut(s) | 1238, 1596, 2099, 3254, 3330 |