Belongs to the RuvB family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G22330 |
| fragaria_vesca | FvH4_2g15320 FvH4_3g34140 |
| malus_domestica | MD03G1150000.v1.1 MD11G1168700.v1.1 |
| prunus_persica | Prupe.6G137000_v2.0.a1 Prupe.6G137000_v2.0.a1 |
| pyrus_communis | pycom03g10400 pycom11g14180 |
| rosa_chinensis | RchiOBHm_Chr2g0115061 RchiOBHm_Chr5g0061781 RchiOBHm_Chr5g0061991 RchiOBHm_Chr6g0278081 |
| rosa_laevigata | RLG00000013241 RLG00000035053 RLG00000035505 |
| rosa_multiflora | Rmu_sc0003709.1_g000012 |
| rosa_roxburghii | Rroxscaffold_1G00018950 Rroxscaffold_2G00125100 Rroxscaffold_2G00125770 Rroxscaffold_2G00125780 Rroxscaffold_7G00190530 |
| rosa_rugosa | Rorug05G0343700 Rorug05G0343800 Rorug05G0343800 Rorug05G0345300 Rorug06G0114600.1 Rorug06G0114700 |
| rosa_samantha | Rh2AG251400 Rh2CG256000 Rh2DG259300 Rh5AG404600 Rh5AG406600 Rh5BG417700 Rh5CG442100 Rh5DG431800 Rh6AG224500 Rh6BG228500 Rh6CG230900 Rh6DG222000 |
| rosa_wichuraiana | Rw5G038010 Rw6G019600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 141 |
| AclWI | GGATC | 1 cut(s) | 139 |
| AcsI | RAATTY | 1 cut(s) | 181 |
| AcuI | CTGAAG | 1 cut(s) | 156 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 59, 128 |
| AjnI | CCWGG | 2 cut(s) | 52, 90 |
| AluBI | AGCT | 2 cut(s) | 77, 97 |
| AluI | AGCT | 2 cut(s) | 77, 97 |
| AlwI | GGATC | 1 cut(s) | 139 |
| ApoI | RAATTY | 1 cut(s) | 181 |
| AspS9I | GGNCC | 1 cut(s) | 47 |
| AvaII | GGWCC | 1 cut(s) | 47 |
| BccI | CCATC | 3 cut(s) | 13, 34, 118 |
| BceAI | ACGGC | 1 cut(s) | 23 |
| BciT130I | CCWGG | 2 cut(s) | 54, 92 |
| BfaI | CTAG | 1 cut(s) | 74 |
| Bme1390I | CCNGG | 2 cut(s) | 54, 92 |
| Bme18I | GGWCC | 1 cut(s) | 47 |
| BmgT120I | GGNCC | 1 cut(s) | 47 |
| BmiI | GGNNCC | 1 cut(s) | 111 |
| BmrFI | CCNGG | 2 cut(s) | 54, 92 |
| BsaJI | CCNNGG | 1 cut(s) | 90 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 59, 128 |
| Bse1I | ACTGG | 1 cut(s) | 64 |
| BseBI | CCWGG | 2 cut(s) | 54, 92 |
| BseDI | CCNNGG | 1 cut(s) | 90 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 59, 128 |
| BseMII | CTCAG | 1 cut(s) | 156 |
| BseNI | ACTGG | 1 cut(s) | 64 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 59, 128 |
| Bsp143I | GATC | 1 cut(s) | 131 |
| BspCNI | CTCAG | 1 cut(s) | 157 |
| BspLI | GGNNCC | 1 cut(s) | 111 |
| BspPI | GGATC | 1 cut(s) | 139 |
| BsrI | ACTGG | 1 cut(s) | 64 |
| BssECI | CCNNGG | 1 cut(s) | 90 |
| BssMI | GATC | 1 cut(s) | 131 |
| BssNAI | GTATAC | 1 cut(s) | 142 |
| Bst1107I | GTATAC | 1 cut(s) | 142 |
| Bst2UI | CCWGG | 2 cut(s) | 54, 92 |
| BstDEI | CTNAG | 1 cut(s) | 165 |
| BstKTI | GATC | 1 cut(s) | 134 |
| BstMBI | GATC | 1 cut(s) | 131 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 29 |
| BstNI | CCWGG | 2 cut(s) | 54, 92 |
| BstSCI | CCNGG | 2 cut(s) | 52, 90 |
| BstX2I | RGATCY | 1 cut(s) | 131 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 98 |
| BstYI | RGATCY | 1 cut(s) | 131 |
| BstZ17I | GTATAC | 1 cut(s) | 142 |
| Cfr13I | GGNCC | 1 cut(s) | 47 |
| CviJI | RGCY | 3 cut(s) | 23, 77, 97 |
| CviKI_1 | RGCY | 3 cut(s) | 23, 77, 97 |
| DdeI | CTNAG | 1 cut(s) | 165 |
| DpnI | GATC | 1 cut(s) | 133 |
| DpnII | GATC | 1 cut(s) | 131 |
| Eco47I | GGWCC | 1 cut(s) | 47 |
| Eco57I | CTGAAG | 1 cut(s) | 156 |
| EcoRII | CCWGG | 2 cut(s) | 52, 90 |
| FaiI | YATR | 1 cut(s) | 142 |
| FblI | GTMKAC | 1 cut(s) | 141 |
| FspBI | CTAG | 1 cut(s) | 74 |
| Hpy166II | GTNNAC | 1 cut(s) | 142 |
| Hpy188I | TCNGA | 2 cut(s) | 39, 136 |
| Hpy8I | GTNNAC | 1 cut(s) | 142 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 29 |
| HpyF3I | CTNAG | 1 cut(s) | 165 |
| Kzo9I | GATC | 1 cut(s) | 131 |
| LmnI | GCTCC | 1 cut(s) | 94 |
| LpnPI | CCDG | 6 cut(s) | 9, 39, 45, 66, 77, 104 |
| MaeI | CTAG | 1 cut(s) | 74 |
| MalI | GATC | 1 cut(s) | 133 |
| MboI | GATC | 1 cut(s) | 131 |
| MboII | GAAGA | 1 cut(s) | 28 |
| MflI | RGATCY | 1 cut(s) | 131 |
| MluCI | AATT | 1 cut(s) | 181 |
| MmeI | TCCRAC | 2 cut(s) | 25, 109 |
| MnlI | CCTC | 2 cut(s) | 60, 160 |
| MseI | TTAA | 2 cut(s) | 156, 173 |
| MspR9I | CCNGG | 2 cut(s) | 54, 92 |
| MvaI | CCWGG | 2 cut(s) | 54, 92 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 29 |
| NdeII | GATC | 1 cut(s) | 131 |
| NlaIV | GGNNCC | 1 cut(s) | 111 |
| PfoI | TCCNGGA | 1 cut(s) | 52 |
| Psp6I | CCWGG | 2 cut(s) | 52, 90 |
| PspGI | CCWGG | 2 cut(s) | 52, 90 |
| PspN4I | GGNNCC | 1 cut(s) | 111 |
| PspPI | GGNCC | 1 cut(s) | 47 |
| PsuI | RGATCY | 1 cut(s) | 131 |
| SaqAI | TTAA | 2 cut(s) | 156, 173 |
| Sau3AI | GATC | 1 cut(s) | 131 |
| Sau96I | GGNCC | 1 cut(s) | 47 |
| ScrFI | CCNGG | 2 cut(s) | 54, 92 |
| SetI | ASST | 5 cut(s) | 52, 79, 99, 111, 171 |
| SinI | GGWCC | 1 cut(s) | 47 |
| Sse9I | AATT | 1 cut(s) | 181 |
| SspMI | CTAG | 1 cut(s) | 74 |
| StyD4I | CCNGG | 2 cut(s) | 52, 90 |
| TasI | AATT | 1 cut(s) | 181 |
| Tru1I | TTAA | 2 cut(s) | 156, 173 |
| Tru9I | TTAA | 2 cut(s) | 156, 173 |
| VpaK11BI | GGWCC | 1 cut(s) | 47 |
| XapI | RAATTY | 1 cut(s) | 181 |
| XmiI | GTMKAC | 1 cut(s) | 141 |
| XspI | CTAG | 1 cut(s) | 74 |