Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003709.1

Orthogroup ID

OG0002367

Physical Location & Seq

Genomic Coordinates Forward (+)

38416 .. 43313

Gene Structure 4898 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003709.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1566 bp

atggacaaagccgtagaagtggcaaattgtcatcaagggttcaaggaggatggtaatggaattgaaaatgaaactgtttttaattgtattcgcttatgtcctagttggggagatattctatgtggcgtcactttatccaactccatgtcttattgggagttatcggcaaaacccagaagagttggagagatggacaaggtgaaaatagaagaggttcagtccactaccaagaagcagcgcatagctactcacacccacatcaaaggccttggtcttgaggccaatggaagagcagcagcttgggctgctggctttgtgggtcagggggaggcaagagaagctgctggtcttgttgttgatatgatacggcagaagaagttggctggtaaggctcttctactggctggacctcctggaactggaaagacagcgttggctcttggaatatcccaggagcttgggagtaaggttccattctgcccaatggttgggtctgaagtatattcatcagaagttaagaaaacagaggttctaatggaaaattttagaagggctattggtctacgtatcaaggaaaataaagaggtctatgaaggagaggtgacagaactaacaccagaagaaacggagagtgttactggtggctatggtaaaagcattagccatgtaatcattgggttaaaaactgtcaaaggaaccaagcaattgaagttggaccccactatttatgatgcattggttaaggaaaaggttgctgttggtgatgttatatatattgaagcaaacagtggggcagtaaaaagggtaggcagaagtgatgcatttgctacggaattcgatcttgaagcagaagagtatgttccacttccaaaaggagaggttcacaaaaagaaggagattgtgcaggatgtaactctgcacgatctagatgctgcgaatgctcgacctcaaggtgggcaagacatattatctctaatgggtcagatgatgaagccaagaaaaacagaaattacggacaaattgcgacaagaaataaacaaggttgttaacaggtatattgatgaaggtgtagcagagcttgttcctggagttctgttcattgatgaggtacatatgctggatatggagtgcttctcgtacttgaatcgtgctttagagagctcgttatctccaatagtaatatttgccacaaatagaggaatttgcaacgtgagagggactgatatggctagtcctcatggaatacctgttgatttgttggaccggttggtgattatccgaacacagacttatggtcctgaagagatgataaagatcttagcaacccgtgcacaggtggaggaactggtagtagatgaggagagtttggcttaccttggagagataggacagcgaacgtctttaaggcatgccgttcagctcttatcccctgcaagcattgtggcaaaaatgaatggcagagacaacatccgcaaggaggatttagaagaagtagctaccctatatctggatgcgaagtcttcagcaaaggttcttcaagagcagcaggaaaaatacatttcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000228 GO:0000491 GO:0000492 GO:0000785 GO:0000790 GO:0000812 GO:0002682 GO:0002831 GO:0003674 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0006325 GO:0006338 GO:0006355 GO:0006357 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009888 GO:0009889 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010604 GO:0010628 GO:0010755 GO:0010756 GO:0010941 GO:0010954 GO:0016043 GO:0016363 GO:0016462 GO:0016569 GO:0016570 GO:0016573 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0022607 GO:0022613 GO:0022618 GO:0030162 GO:0031011 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031347 GO:0031974 GO:0031981 GO:0032101 GO:0032268 GO:0032270 GO:0032392 GO:0032502 GO:0032508 GO:0032991 GO:0033202 GO:0034399 GO:0034622 GO:0034708 GO:0035097 GO:0035267 GO:0036211 GO:0042623 GO:0042981 GO:0043067 GO:0043138 GO:0043140 GO:0043170 GO:0043189 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043900 GO:0043933 GO:0043967 GO:0043968 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044665 GO:0045088 GO:0045862 GO:0048507 GO:0048518 GO:0048522 GO:0048583 GO:0048856 GO:0050776 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051276 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070035 GO:0070603 GO:0070613 GO:0071103 GO:0071339 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0080134 GO:0097255 GO:0097346 GO:0140097 GO:1900150 GO:1901564 GO:1902493 GO:1902494 GO:1902562 GO:1903317 GO:1903319 GO:1903506 GO:1904949 GO:1990234 GO:2000072 GO:2000112 GO:2000269 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04310 map04310

Pfam Domains

Protein Families

TIP49

Protein Analysis

521

Amino Acids

57.24

Weight (kDa)

5.55

Isoelectric Point (pI)

36.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22330
fragaria_vesca	FvH4_2g15320 FvH4_3g34140
malus_domestica	MD03G1150000.v1.1 MD11G1168700.v1.1
prunus_persica	Prupe.6G137000_v2.0.a1 Prupe.6G137000_v2.0.a1
pyrus_communis	pycom03g10400 pycom11g14180
rosa_chinensis	RchiOBHm_Chr2g0115061 RchiOBHm_Chr5g0061781 RchiOBHm_Chr5g0061991 RchiOBHm_Chr6g0278081
rosa_laevigata	RLG00000013241 RLG00000035053 RLG00000035505
rosa_multiflora	Rmu_sc0003709.1_g000012
rosa_roxburghii	Rroxscaffold_1G00018950 Rroxscaffold_2G00125100 Rroxscaffold_2G00125770 Rroxscaffold_2G00125780 Rroxscaffold_7G00190530
rosa_rugosa	Rorug05G0343700 Rorug05G0343800 Rorug05G0343800 Rorug05G0345300 Rorug06G0114600.1 Rorug06G0114700
rosa_samantha	Rh2AG251400 Rh2CG256000 Rh2DG259300 Rh5AG404600 Rh5AG406600 Rh5BG417700 Rh5CG442100 Rh5DG431800 Rh6AG224500 Rh6BG228500 Rh6CG230900 Rh6DG222000
rosa_wichuraiana	Rw5G038010 Rw6G019600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	488
AccI	GTMKAC	1 cut(s)	562
AciI	CCGC	1 cut(s)	1471
AcsI	RAATTY	3 cut(s)	541, 833, 1200
AcuI	CTGAAG	3 cut(s)	516, 1320, 1506
AcyI	GRCGYC	1 cut(s)	126
AfaI	GTAC	2 cut(s)	1110, 1139
AfiI	CCNNNNNNNGG	7 cut(s)	107, 419, 488, 953, 1333, 1477, 1507
AgeI	ACCGGT	1 cut(s)	1263
AgsI	TTSAA	7 cut(s)	43, 65, 709, 779, 845, 1144, 1538
AhdI	GACNNNNNGTC	1 cut(s)	1293
AjnI	CCWGG	3 cut(s)	412, 450, 1084
AluBI	AGCT	8 cut(s)	245, 299, 341, 457, 1078, 1161, 1420, 1496
AluI	AGCT	8 cut(s)	245, 299, 341, 457, 1078, 1161, 1420, 1496
Alw21I	GWGCWC	2 cut(s)	1163, 1333
Alw26I	GTCTC	1 cut(s)	1455
Alw44I	GTGCAC	1 cut(s)	1329
AoxI	GGCC	2 cut(s)	265, 279
ApaLI	GTGCAC	1 cut(s)	1329
ApeKI	GCWGC	7 cut(s)	235, 293, 296, 305, 341, 932, 1543
ApoI	RAATTY	3 cut(s)	541, 833, 1200
AsiGI	ACCGGT	1 cut(s)	1263
Asp700I	GAANNNNTTC	1 cut(s)	213
AspLEI	GCGC	1 cut(s)	240
AspS9I	GGNCC	4 cut(s)	407, 715, 1261, 1295
AsuHPI	GGTGA	4 cut(s)	211, 613, 773, 1282
AvaII	GGWCC	4 cut(s)	407, 715, 1261, 1295
BaeGI	GKGCMC	1 cut(s)	1333
BanII	GRGCYC	1 cut(s)	1163
BbsI	GAAGAC	1 cut(s)	1512
Bbv12I	GWGCWC	2 cut(s)	1163, 1333
BbvI	GCAGC	7 cut(s)	247, 292, 305, 308, 328, 919, 1555
BccI	CCATC	2 cut(s)	44, 184
BceAI	ACGGC	2 cut(s)	383, 1397
BcgI	CGANNNNNNTGC	2 cut(s)	911, 945
BciT130I	CCWGG	3 cut(s)	414, 452, 1086
BcoDI	GTCTC	1 cut(s)	1455
BfaI	CTAG	3 cut(s)	102, 926, 1230
BglII	AGATCT	1 cut(s)	1314
BisI	GCNGC	7 cut(s)	236, 294, 297, 306, 342, 933, 1544
BlsI	GCNGC	7 cut(s)	237, 295, 298, 307, 343, 934, 1545
Bme1390I	CCNGG	3 cut(s)	414, 452, 1086
Bme18I	GGWCC	4 cut(s)	407, 715, 1261, 1295
BmeRI	GACNNNNNGTC	1 cut(s)	1293
BmgT120I	GGNCC	4 cut(s)	407, 715, 1261, 1295
BmiI	GGNNCC	3 cut(s)	471, 697, 717
BmrFI	CCNGG	3 cut(s)	414, 452, 1086
BmsI	GCATC	4 cut(s)	721, 808, 919, 1501
BpiI	GAAGAC	1 cut(s)	1512
BplI	GAGNNNNNCTC	2 cut(s)	1118, 1150
BpmI	CTGGAG	1 cut(s)	1107
BpuEI	CTTGAG	2 cut(s)	296, 933
BsaAI	YACGTR	1 cut(s)	566
BsaBI	GATNNNNATC	1 cut(s)	1313
BsaHI	GRCGYC	1 cut(s)	126
BsaJI	CCNNGG	3 cut(s)	268, 450, 1375
BsaWI	WCCGGW	1 cut(s)	1263
Bsc4I	CCNNNNNNNGG	7 cut(s)	107, 419, 488, 953, 1333, 1477, 1507
Bse118I	RCCGGY	1 cut(s)	1263
Bse1I	ACTGG	4 cut(s)	405, 424, 643, 1350
Bse8I	GATNNNNATC	1 cut(s)	1313
BseBI	CCWGG	3 cut(s)	414, 452, 1086
BseDI	CCNNGG	3 cut(s)	268, 450, 1375
BseGI	GGATG	4 cut(s)	55, 913, 1467, 1516
BseJI	GATNNNNATC	1 cut(s)	1313
BseLI	CCNNNNNNNGG	7 cut(s)	107, 419, 488, 953, 1333, 1477, 1507
BseNI	ACTGG	4 cut(s)	405, 424, 643, 1350
BseRI	GAGGAG	1 cut(s)	1373
BseSI	GKGCMC	1 cut(s)	1333
BseXI	GCAGC	7 cut(s)	247, 292, 305, 308, 328, 919, 1555
BsgI	GTGCAG	2 cut(s)	902, 923
BshFI	GGCC	2 cut(s)	267, 281
BshTI	ACCGGT	1 cut(s)	1263
BsiHKAI	GWGCWC	2 cut(s)	1163, 1333
BsiSI	CCGG	1 cut(s)	1264
BslFI	GGGAC	1 cut(s)	1231
BslI	CCNNNNNNNGG	7 cut(s)	107, 419, 488, 953, 1333, 1477, 1507
BsmAI	GTCTC	1 cut(s)	1455
BsmFI	GGGAC	1 cut(s)	1231
BsmI	GAATGC	1 cut(s)	943
BsnI	GGCC	2 cut(s)	267, 281
Bsp1286I	GDGCHC	2 cut(s)	1163, 1333
Bsp143I	GATC	3 cut(s)	838, 922, 1314
BspACI	CCGC	1 cut(s)	1471
BspANI	GGCC	2 cut(s)	267, 281
BspHI	TCATGA	1 cut(s)	1562
BspLI	GGNNCC	3 cut(s)	471, 697, 717
BspQI	GCTCTTC	2 cut(s)	283, 399
BsrFI	RCCGGY	1 cut(s)	1263
BsrI	ACTGG	4 cut(s)	405, 424, 643, 1350
BssAI	RCCGGY	1 cut(s)	1263
BssECI	CCNNGG	3 cut(s)	268, 450, 1375
BssMI	GATC	3 cut(s)	838, 922, 1314
BssNI	GRCGYC	1 cut(s)	126
BssT1I	CCWWGG	2 cut(s)	268, 1375
Bst2UI	CCWGG	3 cut(s)	414, 452, 1086
Bst4CI	ACNGT	3 cut(s)	76, 688, 788
Bst6I	CTCTTC	6 cut(s)	172, 204, 283, 399, 846, 1296
BstACI	GRCGYC	1 cut(s)	126
BstAPI	GCANNNNNTGC	1 cut(s)	1328
BstBAI	YACGTR	1 cut(s)	566
BstC8I	GCNNGC	3 cut(s)	310, 1410, 1435
BstDEI	CTNAG	1 cut(s)	1318
BstF5I	GGATG	4 cut(s)	55, 913, 1467, 1516
BstHHI	GCGC	1 cut(s)	240
BstKTI	GATC	3 cut(s)	841, 925, 1317
BstMAI	GTCTC	1 cut(s)	1455
BstMBI	GATC	3 cut(s)	838, 922, 1314
BstMWI	GCNNNNNNNGC	6 cut(s)	302, 305, 338, 389, 938, 1328
BstNI	CCWGG	3 cut(s)	414, 452, 1086
BstNSI	RCATGY	1 cut(s)	1412
BstSCI	CCNGG	3 cut(s)	412, 450, 1084
BstSLI	GKGCMC	1 cut(s)	1333
BstSNI	TACGTA	1 cut(s)	566
BstV1I	GCAGC	7 cut(s)	247, 292, 305, 308, 328, 919, 1555
BstV2I	GAAGAC	1 cut(s)	1512
BstX2I	RGATCY	1 cut(s)	1314
BstXI	CCANNNNNNTGG	1 cut(s)	458
BstYI	RGATCY	1 cut(s)	1314
BsuRI	GGCC	2 cut(s)	267, 281
BtsCI	GGATG	4 cut(s)	55, 913, 1467, 1516
BtsIMutI	CAGTG	1 cut(s)	793
Cac8I	GCNNGC	3 cut(s)	310, 1410, 1435
CciI	TCATGA	1 cut(s)	1562
CfoI	GCGC	1 cut(s)	240
Cfr10I	RCCGGY	1 cut(s)	1263
Cfr13I	GGNCC	4 cut(s)	407, 715, 1261, 1295
CseI	GACGC	1 cut(s)	115
Csp6I	GTAC	2 cut(s)	1109, 1138
CspAI	ACCGGT	1 cut(s)	1263
CspCI	CAANNNNNGTGG	2 cut(s)	1422, 1457
CviAII	CATG	5 cut(s)	145, 665, 1238, 1409, 1563
CviQI	GTAC	2 cut(s)	1109, 1138
DdeI	CTNAG	1 cut(s)	1318
DpnI	GATC	3 cut(s)	840, 924, 1316
DpnII	GATC	3 cut(s)	838, 922, 1314
DriI	GACNNNNNGTC	1 cut(s)	1293
Eam1104I	CTCTTC	6 cut(s)	172, 204, 283, 399, 846, 1296
Eam1105I	GACNNNNNGTC	1 cut(s)	1293
EarI	CTCTTC	6 cut(s)	172, 204, 283, 399, 846, 1296
Ecl136II	GAGCTC	1 cut(s)	1161
Eco105I	TACGTA	1 cut(s)	566
Eco130I	CCWWGG	2 cut(s)	268, 1375
Eco147I	AGGCCT	1 cut(s)	267
Eco24I	GRGCYC	1 cut(s)	1163
Eco47I	GGWCC	4 cut(s)	407, 715, 1261, 1295
Eco53kI	GAGCTC	1 cut(s)	1161
Eco57I	CTGAAG	3 cut(s)	516, 1320, 1506
EcoICRI	GAGCTC	1 cut(s)	1161
EcoRI	GAATTC	1 cut(s)	833
EcoRII	CCWGG	3 cut(s)	412, 450, 1084
EcoT14I	CCWWGG	2 cut(s)	268, 1375
EcoT22I	ATGCAT	2 cut(s)	736, 823
EcoT38I	GRGCYC	1 cut(s)	1163
ErhI	CCWWGG	2 cut(s)	268, 1375
FaeI	CATG	5 cut(s)	148, 668, 1241, 1412, 1566
FaqI	GGGAC	1 cut(s)	1231
FatI	CATG	5 cut(s)	144, 664, 1237, 1408, 1562
FauNDI	CATATG	1 cut(s)	1113
FblI	GTMKAC	1 cut(s)	562
Fnu4HI	GCNGC	7 cut(s)	236, 294, 297, 306, 342, 933, 1544
FokI	GGATG	4 cut(s)	62, 920, 1454, 1523
FriOI	GRGCYC	1 cut(s)	1163
Fsp4HI	GCNGC	7 cut(s)	236, 294, 297, 306, 342, 933, 1544
FspBI	CTAG	3 cut(s)	102, 926, 1230
GlaI	GCGC	1 cut(s)	239
GluI	GCNGC	7 cut(s)	236, 294, 297, 306, 342, 933, 1544
GsuI	CTGGAG	1 cut(s)	1107
HaeIII	GGCC	2 cut(s)	267, 281
HapII	CCGG	1 cut(s)	1264
HgaI	GACGC	1 cut(s)	115
HhaI	GCGC	1 cut(s)	240
Hin1I	GRCGYC	1 cut(s)	126
Hin1II	CATG	5 cut(s)	148, 668, 1241, 1412, 1566
Hin6I	GCGC	1 cut(s)	238
HinP1I	GCGC	1 cut(s)	238
HincII	GTYRAC	1 cut(s)	1048
HindII	GTYRAC	1 cut(s)	1048
HinfI	GANTC	1 cut(s)	1144
HpaI	GTTAAC	1 cut(s)	1048
HpaII	CCGG	1 cut(s)	1264
HphI	GGTGA	4 cut(s)	211, 613, 773, 1282
Hpy166II	GTNNAC	5 cut(s)	222, 563, 883, 1048, 1331
Hpy188I	TCNGA	4 cut(s)	496, 511, 984, 1280
Hpy188III	TCNNGA	7 cut(s)	275, 842, 926, 1298, 1508, 1538, 1563
Hpy8I	GTNNAC	5 cut(s)	222, 563, 883, 1048, 1331
HpyAV	CCTTC	4 cut(s)	543, 587, 886, 1058
HpyCH4III	ACNGT	3 cut(s)	76, 688, 788
HpyCH4IV	ACGT	3 cut(s)	565, 1209, 1397
HpyCH4V	TGCA	7 cut(s)	734, 821, 904, 919, 1206, 1331, 1433
HpyF10VI	GCNNNNNNNGC	6 cut(s)	302, 305, 338, 389, 938, 1328
HpyF3I	CTNAG	1 cut(s)	1318
HpySE526I	ACGT	3 cut(s)	565, 1209, 1397
Hsp92I	GRCGYC	1 cut(s)	126
Hsp92II	CATG	5 cut(s)	148, 668, 1241, 1412, 1566
HspAI	GCGC	1 cut(s)	238
KspAI	GTTAAC	1 cut(s)	1048
Kzo9I	GATC	3 cut(s)	838, 922, 1314
LguI	GCTCTTC	2 cut(s)	283, 399
LmnI	GCTCC	1 cut(s)	454
Lsp1109I	GCAGC	7 cut(s)	247, 292, 305, 308, 328, 919, 1555
LweI	GCATC	4 cut(s)	721, 808, 919, 1501
MaeI	CTAG	3 cut(s)	102, 926, 1230
MaeII	ACGT	3 cut(s)	565, 1209, 1397
MaeIII	GTNAC	4 cut(s)	127, 601, 634, 910
MalI	GATC	3 cut(s)	840, 924, 1316
MboI	GATC	3 cut(s)	838, 922, 1314
MfeI	CAATTG	1 cut(s)	704
MflI	RGATCY	1 cut(s)	1314
MhlI	GDGCHC	2 cut(s)	1163, 1333
MluCI	AATT	9 cut(s)	25, 60, 82, 541, 704, 833, 1008, 1019, 1200
MmeI	TCCRAC	4 cut(s)	162, 163, 693, 1239
Mph1103I	ATGCAT	2 cut(s)	736, 823
MroXI	GAANNNNTTC	1 cut(s)	213
MseI	TTAA	6 cut(s)	81, 516, 680, 741, 1047, 1403
MspI	CCGG	1 cut(s)	1264
MspR9I	CCNGG	3 cut(s)	414, 452, 1086
MunI	CAATTG	1 cut(s)	704
Mva1269I	GAATGC	1 cut(s)	943
MvaI	CCWGG	3 cut(s)	414, 452, 1086
MwoI	GCNNNNNNNGC	6 cut(s)	302, 305, 338, 389, 938, 1328
NdeI	CATATG	1 cut(s)	1113
NdeII	GATC	3 cut(s)	838, 922, 1314
NlaIII	CATG	5 cut(s)	148, 668, 1241, 1412, 1566
NlaIV	GGNNCC	3 cut(s)	471, 697, 717
NmuCI	GTSAC	2 cut(s)	127, 601
NsiI	ATGCAT	2 cut(s)	736, 823
NspI	RCATGY	1 cut(s)	1412
PaeI	GCATGC	1 cut(s)	1412
PagI	TCATGA	1 cut(s)	1562
PceI	AGGCCT	1 cut(s)	267
PciSI	GCTCTTC	2 cut(s)	283, 399
PctI	GAATGC	1 cut(s)	943
PdmI	GAANNNNTTC	1 cut(s)	213
PfeI	GAWTC	1 cut(s)	1144
PflMI	CCANNNNNTGG	1 cut(s)	488
PfoI	TCCNGGA	2 cut(s)	412, 1084
PinAI	ACCGGT	1 cut(s)	1263
PkrI	GCNGC	7 cut(s)	237, 295, 298, 307, 343, 934, 1545
Ppu21I	YACGTR	1 cut(s)	566
Psp124BI	GAGCTC	1 cut(s)	1163
Psp6I	CCWGG	3 cut(s)	412, 450, 1084
PspGI	CCWGG	3 cut(s)	412, 450, 1084
PspN4I	GGNNCC	3 cut(s)	471, 697, 717
PspPI	GGNCC	4 cut(s)	407, 715, 1261, 1295
PsuI	RGATCY	1 cut(s)	1314
RsaI	GTAC	2 cut(s)	1110, 1139
RsaNI	GTAC	2 cut(s)	1109, 1138
SacI	GAGCTC	1 cut(s)	1163
SapI	GCTCTTC	2 cut(s)	283, 399
SaqAI	TTAA	6 cut(s)	81, 516, 680, 741, 1047, 1403
SatI	GCNGC	7 cut(s)	236, 294, 297, 306, 342, 933, 1544
Sau3AI	GATC	3 cut(s)	838, 922, 1314
Sau96I	GGNCC	4 cut(s)	407, 715, 1261, 1295
ScrFI	CCNGG	3 cut(s)	414, 452, 1086
SduI	GDGCHC	2 cut(s)	1163, 1333
SfaNI	GCATC	4 cut(s)	721, 808, 919, 1501
SinI	GGWCC	4 cut(s)	407, 715, 1261, 1295
SmlI	CTYRAG	2 cut(s)	275, 948
SmoI	CTYRAG	2 cut(s)	275, 948
SnaBI	TACGTA	1 cut(s)	566
SphI	GCATGC	1 cut(s)	1412
Sse9I	AATT	9 cut(s)	25, 60, 82, 541, 704, 833, 1008, 1019, 1200
SseBI	AGGCCT	1 cut(s)	267
SsiI	CCGC	1 cut(s)	1471
SspI	AATATT	1 cut(s)	1182
SspMI	CTAG	3 cut(s)	102, 926, 1230
SstI	GAGCTC	1 cut(s)	1163
StuI	AGGCCT	1 cut(s)	267
StyD4I	CCNGG	3 cut(s)	412, 450, 1084
StyI	CCWWGG	2 cut(s)	268, 1375
TaaI	ACNGT	3 cut(s)	76, 688, 788
TaiI	ACGT	3 cut(s)	568, 1212, 1400
TaqI	TCGA	2 cut(s)	837, 943
TasI	AATT	9 cut(s)	25, 60, 82, 541, 704, 833, 1008, 1019, 1200
TfiI	GAWTC	1 cut(s)	1144
Tru1I	TTAA	6 cut(s)	81, 516, 680, 741, 1047, 1403
Tru9I	TTAA	6 cut(s)	81, 516, 680, 741, 1047, 1403
TscAI	CASTG	1 cut(s)	793
TseFI	GTSAC	2 cut(s)	127, 601
TseI	GCWGC	7 cut(s)	235, 293, 296, 305, 341, 932, 1543
Tsp45I	GTSAC	2 cut(s)	127, 601
TspDTI	ATGAA	8 cut(s)	84, 495, 606, 1004, 1077, 1087, 1466, 1551
TspGWI	ACGGA	3 cut(s)	641, 845, 1028
TspRI	CASTG	1 cut(s)	793
Van91I	CCANNNNNTGG	1 cut(s)	488
VneI	GTGCAC	1 cut(s)	1329
VpaK11BI	GGWCC	4 cut(s)	407, 715, 1261, 1295
XapI	RAATTY	3 cut(s)	541, 833, 1200
XbaI	TCTAGA	1 cut(s)	925
XceI	RCATGY	1 cut(s)	1412
XcmI	CCANNNNNNNNNTGG	1 cut(s)	671
XmiI	GTMKAC	1 cut(s)	562
XmnI	GAANNNNTTC	1 cut(s)	213
XspI	CTAG	3 cut(s)	102, 926, 1230
Zsp2I	ATGCAT	2 cut(s)	736, 823

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.