Rroxscaffold_1G00018950

Belongs to the RuvB family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
23057769 .. 23062575
4807 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00018950.1

Sequence Viewer

Length: 1443 bp
ATGGACAAGGTGAAAATAGAAGAGGTTCAGTCCACTACCAAGAAGCAGCGCATAGCTACTCACACCCACATCAAAGGCCTTGGTCTTGAGGTTTCTCTCTTTCTATGTTTTACAGATCTGTTTGGCCAATGGAAGAGCAGCAGCTTGGGCTGCTGGCTTTGTGGGTCAGGGGAGGCAAGAGAAGCTGCTGGTCTTGTTGTTGATATGATACGGCAGAAGAAGTTGGCTGGTAAGGCTCTTCTACTGGCTGGACCTCCTGGAACTGGAAAGACAGCGCTGGCTCTCGGAATATCCCAGGAGCTTGGGAGTAAGGTTCCATTCTGCCCAATGGTTGGGTCTGAAGTATATTCATCAGAAGTTAAGAAAACAGAGGTTTTAATGGAAAATTTTAGAAGGGCTATTGGTCTACGTATCAAGGAAAATAAAGAGGTCTATGAAGGAGAGGCAATTCTTGATGCTTTGATAGTGACATTTCAGGTTACAGAACTAACACCAGAAGAAACGGAGAGTGTTACTGGTGGCTATGGTAAAAGCATTAGCCATGTAATTATTGGGTTAAAAACTGTCAAAGGAACCAAGCAATTGAAGTTGGACCCCACTATTTATGATGCATTGGTTAAGGAAAAGGTTGCTGTTGGTGATGTTATATATATTGAAGCAAACAGTGGGGCAGTTAAAAGGGTAGGCAGAAGTGATGCATTTGCTACAGAATTCGATCTTGAAGCAGAAGAGTATGTTCCACTTCCAAAAGGAGAGGTTCACAAAAAGAAGGAGATTGTGCAGGATGTAACTCTGCACGATCTAGATGCTGCGAATGCTCGACCTCAAGGTGGGCAAGACATATTATCTCTAATGGGTCAGATGATGAAGCCAAGAAAAACAGAAATTACGGACAAATTGCGACAAGAAATAAACAAGGTTGTTAACAGGTATATTGATGAAGGTGTAGCAGAGCTTGTTCCTGGAGTTCTGTTCATTGATGAGGTACATATGCTGGATATGGAGTGCTTCTCGTACTTGAATCGTGCTTTAGAGAGCTCGTTATCTCCAATTGTAATATTTGCCACCAATAGAGGAATTTGCAACGTGAGAGGGACTGATATGGCTAGTCCTCATGGAATACCTGTTGATTTGTTGGACCGGTTGGTGATTATCCGAACACAGACTTATGGTCCTGAAGAGATGATAAAGATCCTAGCAACCCGCGCACAGGTGGAGGAACTGGTAGTAGATGAGGAGAGTTTGGCTTACCTTGGAGAGATGGGACAGCGAACGTCATTAAGGCATGCTGTCCAGCTCTTATCCCCTGCAAGCATTGTGGCAAAAATGAATGGCAGAGACAACATCCGCAAGGAGGATTTAGAAGAAGTAGCTACCCTATATCTGGATGCAAAGTCTTCAGCAAAGGTTCTTCAAGAGCAGCAGGAAAAATACATTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000123 GO:0000228 GO:0000491 GO:0000492 GO:0000785 GO:0000790 GO:0000812 GO:0002682 GO:0002831 GO:0003674 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0006325 GO:0006338 GO:0006355 GO:0006357 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009888 GO:0009889 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010604 GO:0010628 GO:0010755 GO:0010756 GO:0010941 GO:0010954 GO:0016043 GO:0016363 GO:0016462 GO:0016569 GO:0016570 GO:0016573 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0022607 GO:0022613 GO:0022618 GO:0030162 GO:0031011 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031347 GO:0031974 GO:0031981 GO:0032101 GO:0032268 GO:0032270 GO:0032392 GO:0032502 GO:0032508 GO:0032991 GO:0033202 GO:0034399 GO:0034622 GO:0034708 GO:0035097 GO:0035267 GO:0036211 GO:0042623 GO:0042981 GO:0043067 GO:0043138 GO:0043140 GO:0043170 GO:0043189 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043900 GO:0043933 GO:0043967 GO:0043968 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044665 GO:0045088 GO:0045862 GO:0048507 GO:0048518 GO:0048522 GO:0048583 GO:0048856 GO:0050776 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051276 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070035 GO:0070603 GO:0070613 GO:0071103 GO:0071339 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0080134 GO:0097255 GO:0097346 GO:0140097 GO:1900150 GO:1901564 GO:1902493 GO:1902494 GO:1902562 GO:1903317 GO:1903319 GO:1903506 GO:1904949 GO:1990234 GO:2000072 GO:2000112 GO:2000269 GO:2001141
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

480

Amino Acids

52.89

Weight (kDa)

5.54

Isoelectric Point (pI)

38.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIP49 PF06068 17 - 391 6.1e-155 TIP49 P-loop domain
AAA PF00004 80 - 129 1.3e-06 ATPase family associated with various cellular activities (AAA)
TIP49_C PF17856 398 - 463 1.2e-18 TIP49 AAA-lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 332
AccI GTMKAC 1 cut(s) 406
AccII CGCG 1 cut(s) 1206
AciI CCGC 2 cut(s) 1204, 1348
AclWI GGATC 1 cut(s) 1186
AcoI YGGCCR 1 cut(s) 124
AcsI RAATTY 3 cut(s) 385, 710, 1077
AcuI CTGAAG 3 cut(s) 360, 1197, 1383
AfaI GTAC 2 cut(s) 987, 1016
AfeI AGCGCT 1 cut(s) 276
AfiI CCNNNNNNNGG 6 cut(s) 263, 332, 830, 1210, 1354, 1384
AgeI ACCGGT 1 cut(s) 1140
AgsI TTSAA 5 cut(s) 586, 656, 722, 1021, 1415
AhdI GACNNNNNGTC 1 cut(s) 1170
AjnI CCWGG 3 cut(s) 256, 294, 961
AluBI AGCT 8 cut(s) 56, 144, 185, 301, 955, 1038, 1297, 1373
AluI AGCT 8 cut(s) 56, 144, 185, 301, 955, 1038, 1297, 1373
Alw21I GWGCWC 1 cut(s) 1040
Alw26I GTCTC 1 cut(s) 1332
AlwI GGATC 1 cut(s) 1186
Aor51HI AGCGCT 1 cut(s) 276
AoxI GGCC 2 cut(s) 76, 124
ApeKI GCWGC 7 cut(s) 46, 138, 141, 150, 185, 809, 1420
ApoI RAATTY 3 cut(s) 385, 710, 1077
AsiGI ACCGGT 1 cut(s) 1140
Asp700I GAANNNNTTC 1 cut(s) 24
AspLEI GCGC 3 cut(s) 51, 277, 1208
AspS9I GGNCC 4 cut(s) 251, 592, 1138, 1172
AsuHPI GGTGA 3 cut(s) 22, 650, 1159
AvaII GGWCC 4 cut(s) 251, 592, 1138, 1172
BalI TGGCCA 1 cut(s) 126
BanII GRGCYC 1 cut(s) 1040
BbsI GAAGAC 1 cut(s) 1389
Bbv12I GWGCWC 1 cut(s) 1040
BbvI GCAGC 7 cut(s) 58, 137, 150, 153, 172, 796, 1432
BccI CCATC 1 cut(s) 1255
BceAI ACGGC 1 cut(s) 227
BcgI CGANNNNNNTGC 2 cut(s) 788, 822
BciT130I CCWGG 3 cut(s) 258, 296, 963
BcoDI GTCTC 1 cut(s) 1332
BfaI CTAG 3 cut(s) 803, 1107, 1196
BfmI CTRYAG 1 cut(s) 705
BfoI RGCGCY 1 cut(s) 278
BglII AGATCT 1 cut(s) 115
BisI GCNGC 7 cut(s) 47, 139, 142, 151, 186, 810, 1421
BlsI GCNGC 7 cut(s) 48, 140, 143, 152, 187, 811, 1422
Bme1390I CCNGG 3 cut(s) 258, 296, 963
Bme18I GGWCC 4 cut(s) 251, 592, 1138, 1172
BmeRI GACNNNNNGTC 1 cut(s) 1170
BmgT120I GGNCC 4 cut(s) 251, 592, 1138, 1172
BmiI GGNNCC 3 cut(s) 315, 574, 594
BmrFI CCNGG 3 cut(s) 258, 296, 963
BmsI GCATC 5 cut(s) 445, 598, 685, 796, 1378
BpiI GAAGAC 1 cut(s) 1389
BplI GAGNNNNNCTC 2 cut(s) 995, 1027
BpmI CTGGAG 1 cut(s) 984
BpuEI CTTGAG 2 cut(s) 107, 810
BsaAI YACGTR 1 cut(s) 410
BsaBI GATNNNNATC 1 cut(s) 1190
BsaJI CCNNGG 3 cut(s) 79, 294, 1252
BsaWI WCCGGW 1 cut(s) 1140
Bsc4I CCNNNNNNNGG 6 cut(s) 263, 332, 830, 1210, 1354, 1384
Bse118I RCCGGY 1 cut(s) 1140
Bse1I ACTGG 4 cut(s) 249, 268, 520, 1227
Bse8I GATNNNNATC 1 cut(s) 1190
BseBI CCWGG 3 cut(s) 258, 296, 963
BseDI CCNNGG 3 cut(s) 79, 294, 1252
BseGI GGATG 3 cut(s) 790, 1344, 1393
BseJI GATNNNNATC 1 cut(s) 1190
BseLI CCNNNNNNNGG 6 cut(s) 263, 332, 830, 1210, 1354, 1384
BseNI ACTGG 4 cut(s) 249, 268, 520, 1227
BseRI GAGGAG 1 cut(s) 1250
BseXI GCAGC 7 cut(s) 58, 137, 150, 153, 172, 796, 1432
BsgI GTGCAG 2 cut(s) 779, 800
Bsh1236I CGCG 1 cut(s) 1206
BshFI GGCC 2 cut(s) 78, 126
BshTI ACCGGT 1 cut(s) 1140
BsiHKAI GWGCWC 1 cut(s) 1040
BsiSI CCGG 1 cut(s) 1141
BslFI GGGAC 2 cut(s) 1108, 1278
BslI CCNNNNNNNGG 6 cut(s) 263, 332, 830, 1210, 1354, 1384
BsmAI GTCTC 1 cut(s) 1332
BsmFI GGGAC 2 cut(s) 1108, 1278
BsmI GAATGC 1 cut(s) 820
BsnI GGCC 2 cut(s) 78, 126
Bsp1286I GDGCHC 1 cut(s) 1040
Bsp143I GATC 4 cut(s) 115, 715, 799, 1191
BspACI CCGC 2 cut(s) 1204, 1348
BspANI GGCC 2 cut(s) 78, 126
BspFNI CGCG 1 cut(s) 1206
BspHI TCATGA 1 cut(s) 1439
BspLI GGNNCC 3 cut(s) 315, 574, 594
BspPI GGATC 1 cut(s) 1186
BspQI GCTCTTC 2 cut(s) 128, 243
BsrFI RCCGGY 1 cut(s) 1140
BsrI ACTGG 4 cut(s) 249, 268, 520, 1227
BssAI RCCGGY 1 cut(s) 1140
BssECI CCNNGG 3 cut(s) 79, 294, 1252
BssMI GATC 4 cut(s) 115, 715, 799, 1191
BssT1I CCWWGG 2 cut(s) 79, 1252
Bst2UI CCWGG 3 cut(s) 258, 296, 963
Bst4CI ACNGT 2 cut(s) 565, 665
Bst6I CTCTTC 5 cut(s) 15, 128, 243, 723, 1173
BstBAI YACGTR 1 cut(s) 410
BstC8I GCNNGC 4 cut(s) 155, 279, 1287, 1312
BstF5I GGATG 3 cut(s) 790, 1344, 1393
BstFNI CGCG 1 cut(s) 1206
BstH2I RGCGCY 1 cut(s) 278
BstHHI GCGC 3 cut(s) 51, 277, 1208
BstKTI GATC 4 cut(s) 118, 718, 802, 1194
BstMAI GTCTC 1 cut(s) 1332
BstMBI GATC 4 cut(s) 115, 715, 799, 1191
BstMWI GCNNNNNNNGC 6 cut(s) 147, 150, 182, 233, 815, 1205
BstNI CCWGG 3 cut(s) 258, 296, 963
BstNSI RCATGY 1 cut(s) 1289
BstSCI CCNGG 3 cut(s) 256, 294, 961
BstSFI CTRYAG 1 cut(s) 705
BstSNI TACGTA 1 cut(s) 410
BstUI CGCG 1 cut(s) 1206
BstV1I GCAGC 7 cut(s) 58, 137, 150, 153, 172, 796, 1432
BstV2I GAAGAC 1 cut(s) 1389
BstX2I RGATCY 2 cut(s) 115, 1191
BstXI CCANNNNNNTGG 1 cut(s) 302
BstYI RGATCY 2 cut(s) 115, 1191
BsuRI GGCC 2 cut(s) 78, 126
BtsCI GGATG 3 cut(s) 790, 1344, 1393
BtsIMutI CAGTG 1 cut(s) 670
Cac8I GCNNGC 4 cut(s) 155, 279, 1287, 1312
CciI TCATGA 1 cut(s) 1439
CfoI GCGC 3 cut(s) 51, 277, 1208
Cfr10I RCCGGY 1 cut(s) 1140
Cfr13I GGNCC 4 cut(s) 251, 592, 1138, 1172
Csp6I GTAC 2 cut(s) 986, 1015
CspAI ACCGGT 1 cut(s) 1140
CspCI CAANNNNNGTGG 2 cut(s) 1299, 1334
CviAII CATG 4 cut(s) 542, 1115, 1286, 1440
CviQI GTAC 2 cut(s) 986, 1015
DpnI GATC 4 cut(s) 117, 717, 801, 1193
DpnII GATC 4 cut(s) 115, 715, 799, 1191
DriI GACNNNNNGTC 1 cut(s) 1170
EaeI YGGCCR 1 cut(s) 124
Eam1104I CTCTTC 5 cut(s) 15, 128, 243, 723, 1173
Eam1105I GACNNNNNGTC 1 cut(s) 1170
EarI CTCTTC 5 cut(s) 15, 128, 243, 723, 1173
Ecl136II GAGCTC 1 cut(s) 1038
Eco105I TACGTA 1 cut(s) 410
Eco130I CCWWGG 2 cut(s) 79, 1252
Eco147I AGGCCT 1 cut(s) 78
Eco24I GRGCYC 1 cut(s) 1040
Eco47I GGWCC 4 cut(s) 251, 592, 1138, 1172
Eco47III AGCGCT 1 cut(s) 276
Eco53kI GAGCTC 1 cut(s) 1038
Eco57I CTGAAG 3 cut(s) 360, 1197, 1383
EcoICRI GAGCTC 1 cut(s) 1038
EcoRI GAATTC 1 cut(s) 710
EcoRII CCWGG 3 cut(s) 256, 294, 961
EcoT14I CCWWGG 2 cut(s) 79, 1252
EcoT22I ATGCAT 2 cut(s) 613, 700
EcoT38I GRGCYC 1 cut(s) 1040
ErhI CCWWGG 2 cut(s) 79, 1252
FaeI CATG 4 cut(s) 545, 1118, 1289, 1443
FaqI GGGAC 2 cut(s) 1108, 1278
FatI CATG 4 cut(s) 541, 1114, 1285, 1439
FauI CCCGC 1 cut(s) 1211
FauNDI CATATG 1 cut(s) 990
FblI GTMKAC 1 cut(s) 406
Fnu4HI GCNGC 7 cut(s) 47, 139, 142, 151, 186, 810, 1421
FokI GGATG 3 cut(s) 797, 1331, 1400
FriOI GRGCYC 1 cut(s) 1040
Fsp4HI GCNGC 7 cut(s) 47, 139, 142, 151, 186, 810, 1421
FspBI CTAG 3 cut(s) 803, 1107, 1196
GlaI GCGC 3 cut(s) 50, 276, 1207
GluI GCNGC 7 cut(s) 47, 139, 142, 151, 186, 810, 1421
GsuI CTGGAG 1 cut(s) 984
HaeII RGCGCY 1 cut(s) 278
HaeIII GGCC 2 cut(s) 78, 126
HapII CCGG 1 cut(s) 1141
HhaI GCGC 3 cut(s) 51, 277, 1208
Hin1II CATG 4 cut(s) 545, 1118, 1289, 1443
Hin6I GCGC 3 cut(s) 49, 275, 1206
HinP1I GCGC 3 cut(s) 49, 275, 1206
HincII GTYRAC 1 cut(s) 925
HindII GTYRAC 1 cut(s) 925
HinfI GANTC 1 cut(s) 1021
HpaI GTTAAC 1 cut(s) 925
HpaII CCGG 1 cut(s) 1141
HphI GGTGA 3 cut(s) 22, 650, 1159
Hpy166II GTNNAC 4 cut(s) 33, 407, 760, 925
Hpy188I TCNGA 5 cut(s) 287, 340, 355, 861, 1157
Hpy188III TCNNGA 8 cut(s) 86, 452, 719, 803, 1175, 1385, 1415, 1440
Hpy8I GTNNAC 4 cut(s) 33, 407, 760, 925
HpyAV CCTTC 4 cut(s) 387, 431, 763, 935
HpyCH4III ACNGT 2 cut(s) 565, 665
HpyCH4IV ACGT 3 cut(s) 409, 1086, 1274
HpyCH4V TGCA 7 cut(s) 611, 698, 781, 796, 1083, 1310, 1391
HpyF10VI GCNNNNNNNGC 6 cut(s) 147, 150, 182, 233, 815, 1205
HpySE526I ACGT 3 cut(s) 409, 1086, 1274
Hsp92II CATG 4 cut(s) 545, 1118, 1289, 1443
HspAI GCGC 3 cut(s) 49, 275, 1206
KspAI GTTAAC 1 cut(s) 925
Kzo9I GATC 4 cut(s) 115, 715, 799, 1191
LguI GCTCTTC 2 cut(s) 128, 243
LmnI GCTCC 1 cut(s) 298
Lsp1109I GCAGC 7 cut(s) 58, 137, 150, 153, 172, 796, 1432
LweI GCATC 5 cut(s) 445, 598, 685, 796, 1378
MaeI CTAG 3 cut(s) 803, 1107, 1196
MaeII ACGT 3 cut(s) 409, 1086, 1274
MaeIII GTNAC 4 cut(s) 466, 478, 511, 787
MalI GATC 4 cut(s) 117, 717, 801, 1193
MboI GATC 4 cut(s) 115, 715, 799, 1191
MfeI CAATTG 2 cut(s) 581, 1050
MflI RGATCY 2 cut(s) 115, 1191
MhlI GDGCHC 1 cut(s) 1040
MlsI TGGCCA 1 cut(s) 126
MluCI AATT 9 cut(s) 385, 447, 546, 581, 710, 885, 896, 1050, 1077
MluNI TGGCCA 1 cut(s) 126
MmeI TCCRAC 2 cut(s) 570, 1116
Mox20I TGGCCA 1 cut(s) 126
Mph1103I ATGCAT 2 cut(s) 613, 700
MroXI GAANNNNTTC 1 cut(s) 24
MscI TGGCCA 1 cut(s) 126
MseI TTAA 7 cut(s) 360, 377, 557, 618, 675, 924, 1280
Msp20I TGGCCA 1 cut(s) 126
MspI CCGG 1 cut(s) 1141
MspR9I CCNGG 3 cut(s) 258, 296, 963
MunI CAATTG 2 cut(s) 581, 1050
Mva1269I GAATGC 1 cut(s) 820
MvaI CCWGG 3 cut(s) 258, 296, 963
MvnI CGCG 1 cut(s) 1206
MwoI GCNNNNNNNGC 6 cut(s) 147, 150, 182, 233, 815, 1205
NdeI CATATG 1 cut(s) 990
NdeII GATC 4 cut(s) 115, 715, 799, 1191
NlaIII CATG 4 cut(s) 545, 1118, 1289, 1443
NlaIV GGNNCC 3 cut(s) 315, 574, 594
NmuCI GTSAC 1 cut(s) 466
NsiI ATGCAT 2 cut(s) 613, 700
NspI RCATGY 1 cut(s) 1289
PaeI GCATGC 1 cut(s) 1289
PagI TCATGA 1 cut(s) 1439
PceI AGGCCT 1 cut(s) 78
PciSI GCTCTTC 2 cut(s) 128, 243
PctI GAATGC 1 cut(s) 820
PdmI GAANNNNTTC 1 cut(s) 24
PfeI GAWTC 1 cut(s) 1021
PflMI CCANNNNNTGG 1 cut(s) 332
PfoI TCCNGGA 2 cut(s) 256, 961
PinAI ACCGGT 1 cut(s) 1140
PkrI GCNGC 7 cut(s) 48, 140, 143, 152, 187, 811, 1422
Ppu21I YACGTR 1 cut(s) 410
Psp124BI GAGCTC 1 cut(s) 1040
Psp6I CCWGG 3 cut(s) 256, 294, 961
PspGI CCWGG 3 cut(s) 256, 294, 961
PspN4I GGNNCC 3 cut(s) 315, 574, 594
PspPI GGNCC 4 cut(s) 251, 592, 1138, 1172
PsuI RGATCY 2 cut(s) 115, 1191
RsaI GTAC 2 cut(s) 987, 1016
RsaNI GTAC 2 cut(s) 986, 1015
SacI GAGCTC 1 cut(s) 1040
SapI GCTCTTC 2 cut(s) 128, 243
SaqAI TTAA 7 cut(s) 360, 377, 557, 618, 675, 924, 1280
SatI GCNGC 7 cut(s) 47, 139, 142, 151, 186, 810, 1421
Sau3AI GATC 4 cut(s) 115, 715, 799, 1191
Sau96I GGNCC 4 cut(s) 251, 592, 1138, 1172
ScrFI CCNGG 3 cut(s) 258, 296, 963
SduI GDGCHC 1 cut(s) 1040
SfaNI GCATC 5 cut(s) 445, 598, 685, 796, 1378
SfcI CTRYAG 1 cut(s) 705
SinI GGWCC 4 cut(s) 251, 592, 1138, 1172
SmlI CTYRAG 2 cut(s) 86, 825
SmoI CTYRAG 2 cut(s) 86, 825
SnaBI TACGTA 1 cut(s) 410
SphI GCATGC 1 cut(s) 1289
Sse9I AATT 9 cut(s) 385, 447, 546, 581, 710, 885, 896, 1050, 1077
SseBI AGGCCT 1 cut(s) 78
SsiI CCGC 2 cut(s) 1204, 1348
SspI AATATT 1 cut(s) 1059
SspMI CTAG 3 cut(s) 803, 1107, 1196
SstI GAGCTC 1 cut(s) 1040
StuI AGGCCT 1 cut(s) 78
StyD4I CCNGG 3 cut(s) 256, 294, 961
StyI CCWWGG 2 cut(s) 79, 1252
TaaI ACNGT 2 cut(s) 565, 665
TaiI ACGT 3 cut(s) 412, 1089, 1277
TaqI TCGA 2 cut(s) 714, 820
TasI AATT 9 cut(s) 385, 447, 546, 581, 710, 885, 896, 1050, 1077
TfiI GAWTC 1 cut(s) 1021
Tru1I TTAA 7 cut(s) 360, 377, 557, 618, 675, 924, 1280
Tru9I TTAA 7 cut(s) 360, 377, 557, 618, 675, 924, 1280
TscAI CASTG 1 cut(s) 670
TseFI GTSAC 1 cut(s) 466
TseI GCWGC 7 cut(s) 46, 138, 141, 150, 185, 809, 1420
Tsp45I GTSAC 1 cut(s) 466
TspDTI ATGAA 7 cut(s) 339, 450, 881, 954, 964, 1343, 1428
TspGWI ACGGA 2 cut(s) 518, 905
TspRI CASTG 1 cut(s) 670
Van91I CCANNNNNTGG 1 cut(s) 332
VpaK11BI GGWCC 4 cut(s) 251, 592, 1138, 1172
XapI RAATTY 3 cut(s) 385, 710, 1077
XbaI TCTAGA 1 cut(s) 802
XceI RCATGY 1 cut(s) 1289
XcmI CCANNNNNNNNNTGG 1 cut(s) 548
XmiI GTMKAC 1 cut(s) 406
XmnI GAANNNNTTC 1 cut(s) 24
XspI CTAG 3 cut(s) 803, 1107, 1196
Zsp2I ATGCAT 2 cut(s) 613, 700
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.