Rroxscaffold_7G00190530

Belongs to the RuvB family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0002367
Physical Location & Seq
Reverse (-)
30666603 .. 30672462
5860 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00190530.1

Sequence Viewer

Length: 1431 bp
ATGGACAGGGTGAAAATAGAAGAGGTTCAGTCCACTACCAAGAAGCAGCGCATAGCCACTCACACCCACATCAAAGGCCTTGGTCTTGAGGTTTTAAGGTCTGTTTGGTATGCTATGTTTGGTGACGTTCTTCTTAGATTGCCTGCAAATGGAAGAGCAGCACCTTGGGCTGCTGGCTTTGTGGGTCAGGGGGAGGCCAGAGAAGCTGCTGGTCTTGTTGTTGATATGATACGGCAGAAGAAGATGGCTGGTAAGGCACTTCTGATGGCTGGACCTCCTGGAACTGGAAAGACAGCACTAGCGCTTGGAATATCCCAGGAGCTTGGCAGTAAGGTTCCATTCTGCCCGATGGTTGGATCTGAAGTATACTCATCAGAAGTTAAGAAAACTGAGGTTTTAATGGAAAATTTTAGACGAGCTATTGGTCTACGTATCAAGGAAAATAAAGAGGTGACAGAACTAACACCAGAAGAGACCGAGAGTGTTACGGGTGGCTACGGTAAAAGCATTAGCCATGTAATCATTGGATTAAAAACTGTCAAAGGAACCAAACAACTGAAGTTGGACCCCACTATTTATGACGCATTGATCAAGGAAAAGGTAGCTGTTGGTGATGTCATATACATTGAGGCAAATAGTGGAGCAGTAAAAAGGGTTGGTAGAAGTGATGCTTTTGCCACCGAATTTGATCTGGAAGCAGAAGAGTATGTTCCACTACCAAAAGGAGAGGACGTAACACTGCATGATCTGGATGCTGCAAATGCACGACCTCAAGGTGGCCAAGACATATTATCTCTAATGGGTCAGATGATGAAACCAAGGAAAACAGAAATTACTGACAAGTTGCGACAGGAAATAAATAAGGTTGTTAACCGGTATATTGATGAAGGCGTAGCGGAGCTTGTACCTGGAGTTCTGTTCATTGATGAGGCATTGCCTAGATCTCTCACTATGCTCACTGTTATGGCTTACTTTCTGAACATTGGTCTGTTGCTCTGCAGAGGGACTGATATGGCCAGTCCTCACGGAATACCTGTTGACTTGTTGGACCGGTTGGTGATTATCCGAACTCAGACGTACGGTCCTGAAGAGATGATAAAGATTTTAGCAACCCGTGCACAGGTGGAGGAACTAGTTATAGAGGAGGAGAGTTTGGCTTACCTGGGAGAGATAGGCCAAAAATCATCTTTAAGGTCTGGCATGATTGTTGGATTTGTAACTTTTGAGTTCTTTTCCTCTAAAGGATGCTTACAATATTATATTTTCCTCAGGCATGCTGTTCAGCTCTTGTCACCTGCAAGCATTGTGGCAAAAATGAATGGCAGAGACAACATCTGCAAGGCGGATCTAGAAGAAGTGGATACACTATATCTGGATGCGAAGTCTTCAGCAAAGGTTCTCCAAGAGCAGCAGGAAAAGTACATTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000123 GO:0000228 GO:0000491 GO:0000492 GO:0000785 GO:0000790 GO:0000812 GO:0002682 GO:0002831 GO:0003674 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0006325 GO:0006338 GO:0006355 GO:0006357 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009888 GO:0009889 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010604 GO:0010628 GO:0010755 GO:0010756 GO:0010941 GO:0010954 GO:0016043 GO:0016363 GO:0016462 GO:0016569 GO:0016570 GO:0016573 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0022607 GO:0022613 GO:0022618 GO:0030162 GO:0031011 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031347 GO:0031974 GO:0031981 GO:0032101 GO:0032268 GO:0032270 GO:0032392 GO:0032502 GO:0032508 GO:0032991 GO:0033202 GO:0034399 GO:0034622 GO:0034708 GO:0035097 GO:0035267 GO:0036211 GO:0042623 GO:0042981 GO:0043067 GO:0043138 GO:0043140 GO:0043170 GO:0043189 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043900 GO:0043933 GO:0043967 GO:0043968 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044665 GO:0045088 GO:0045862 GO:0048507 GO:0048518 GO:0048522 GO:0048583 GO:0048856 GO:0050776 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051276 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070035 GO:0070603 GO:0070613 GO:0071103 GO:0071339 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0080134 GO:0097255 GO:0097346 GO:0140097 GO:1900150 GO:1901564 GO:1902493 GO:1902494 GO:1902562 GO:1903317 GO:1903319 GO:1903506 GO:1904949 GO:1990234 GO:2000072 GO:2000112 GO:2000269 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04310 map04310
Pfam Domains
Protein Families
TIP49

Protein Analysis

476

Amino Acids

52.35

Weight (kDa)

5.89

Isoelectric Point (pI)

45.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIP49 PF06068 17 - 361 2.6e-115 TIP49 P-loop domain
RuvB_N PF05496 59 - 112 1.1e-06 Holliday junction DNA helicase RuvB P-loop domain
AAA PF00004 87 - 136 3.1e-06 ATPase family associated with various cellular activities (AAA)
TIP49_C PF17856 423 - 459 6.5e-07 TIP49 AAA-lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1303
Acc36I ACCTGC 1 cut(s) 1303
AccI GTMKAC 2 cut(s) 366, 427
AciI CCGC 2 cut(s) 896, 1343
AclWI GGATC 2 cut(s) 364, 1353
AcoI YGGCCR 2 cut(s) 778, 1014
AcsI RAATTY 2 cut(s) 406, 683
AcuI CTGAAG 4 cut(s) 381, 578, 1107, 1371
AfaI GTAC 3 cut(s) 906, 1079, 1421
AfeI AGCGCT 1 cut(s) 303
AfiI CCNNNNNNNGG 5 cut(s) 149, 284, 353, 776, 1120
AgeI ACCGGT 2 cut(s) 873, 1050
AhdI GACNNNNNGTC 1 cut(s) 1080
AhlI ACTAGT 1 cut(s) 1132
AjnI CCWGG 4 cut(s) 277, 315, 907, 1161
AluBI AGCT 6 cut(s) 206, 322, 419, 605, 901, 1285
AluI AGCT 6 cut(s) 206, 322, 419, 605, 901, 1285
Alw21I GWGCWC 1 cut(s) 1120
Alw26I GTCTC 2 cut(s) 467, 1320
Alw44I GTGCAC 1 cut(s) 1116
AlwI GGATC 2 cut(s) 364, 1353
Aor51HI AGCGCT 1 cut(s) 303
AoxI GGCC 5 cut(s) 76, 195, 778, 1014, 1174
ApaLI GTGCAC 1 cut(s) 1116
ApeKI GCWGC 6 cut(s) 46, 158, 170, 206, 755, 1408
ApoI RAATTY 2 cut(s) 406, 683
AsiGI ACCGGT 2 cut(s) 873, 1050
Asp700I GAANNNNTTC 1 cut(s) 24
AspLEI GCGC 2 cut(s) 51, 304
AspS9I GGNCC 4 cut(s) 272, 565, 1048, 1082
AsuHPI GGTGA 6 cut(s) 22, 134, 463, 623, 1069, 1284
AvaII GGWCC 4 cut(s) 272, 565, 1048, 1082
AxyI CCTNAGG 1 cut(s) 1268
BaeGI GKGCMC 1 cut(s) 1120
BalI TGGCCA 2 cut(s) 780, 1016
BbsI GAAGAC 1 cut(s) 1377
Bbv12I GWGCWC 1 cut(s) 1120
BbvI GCAGC 6 cut(s) 58, 157, 170, 193, 742, 1420
BccI CCATC 3 cut(s) 238, 259, 343
BceAI ACGGC 1 cut(s) 248
BciT130I CCWGG 4 cut(s) 279, 317, 909, 1163
BciVI GTATCC 1 cut(s) 1354
BclI TGATCA 1 cut(s) 588
BcoDI GTCTC 2 cut(s) 467, 1320
BcuI ACTAGT 1 cut(s) 1132
BfaI CTAG 4 cut(s) 299, 939, 1133, 1349
BfmI CTRYAG 1 cut(s) 997
BfoI RGCGCY 1 cut(s) 305
BfuAI ACCTGC 1 cut(s) 1303
BfuI GTATCC 1 cut(s) 1354
BglII AGATCT 1 cut(s) 941
BisI GCNGC 6 cut(s) 47, 159, 171, 207, 756, 1409
BlsI GCNGC 6 cut(s) 48, 160, 172, 208, 757, 1410
Bme1390I CCNGG 4 cut(s) 279, 317, 909, 1163
Bme18I GGWCC 4 cut(s) 272, 565, 1048, 1082
BmeRI GACNNNNNGTC 1 cut(s) 1080
BmgT120I GGNCC 4 cut(s) 272, 565, 1048, 1082
BmiI GGNNCC 3 cut(s) 336, 547, 567
BmrFI CCNGG 4 cut(s) 279, 317, 909, 1163
BmsI GCATC 4 cut(s) 658, 742, 1235, 1366
BpiI GAAGAC 1 cut(s) 1377
BpmI CTGGAG 1 cut(s) 930
BpuEI CTTGAG 2 cut(s) 107, 756
BsaAI YACGTR 1 cut(s) 431
BsaI GGTCTC 1 cut(s) 467
BsaJI CCNNGG 5 cut(s) 79, 164, 315, 818, 1162
BsaWI WCCGGW 2 cut(s) 873, 1050
BsaXI ACNNNNNCTCC 2 cut(s) 717, 747
Bsc4I CCNNNNNNNGG 5 cut(s) 149, 284, 353, 776, 1120
Bse118I RCCGGY 2 cut(s) 873, 1050
Bse1I ACTGG 2 cut(s) 289, 1017
Bse21I CCTNAGG 1 cut(s) 1268
Bse3DI GCAATG 1 cut(s) 932
BseBI CCWGG 4 cut(s) 279, 317, 909, 1163
BseDI CCNNGG 5 cut(s) 79, 164, 315, 818, 1162
BseGI GGATG 3 cut(s) 757, 1250, 1381
BseLI CCNNNNNNNGG 5 cut(s) 149, 284, 353, 776, 1120
BseMI GCAATG 1 cut(s) 932
BseMII CTCAG 3 cut(s) 381, 1085, 1282
BseNI ACTGG 2 cut(s) 289, 1017
BseRI GAGGAG 2 cut(s) 1157, 1160
BseSI GKGCMC 1 cut(s) 1120
BseXI GCAGC 6 cut(s) 58, 157, 170, 193, 742, 1420
BshFI GGCC 5 cut(s) 78, 197, 780, 1016, 1176
BshTI ACCGGT 2 cut(s) 873, 1050
BsiHKAI GWGCWC 1 cut(s) 1120
BsiSI CCGG 2 cut(s) 874, 1051
BsiWI CGTACG 1 cut(s) 1077
BslFI GGGAC 1 cut(s) 1018
BslI CCNNNNNNNGG 5 cut(s) 149, 284, 353, 776, 1120
BsmAI GTCTC 2 cut(s) 467, 1320
BsmFI GGGAC 1 cut(s) 1018
BsnI GGCC 5 cut(s) 78, 197, 780, 1016, 1176
Bso31I GGTCTC 1 cut(s) 467
Bsp1286I GDGCHC 1 cut(s) 1120
Bsp143I GATC 6 cut(s) 356, 588, 688, 745, 941, 1345
BspACI CCGC 2 cut(s) 896, 1343
BspANI GGCC 5 cut(s) 78, 197, 780, 1016, 1176
BspCNI CTCAG 3 cut(s) 382, 1084, 1281
BspLI GGNNCC 3 cut(s) 336, 547, 567
BspMAI CTGCAG 1 cut(s) 1001
BspMI ACCTGC 1 cut(s) 1303
BspPI GGATC 2 cut(s) 364, 1353
BspQI GCTCTTC 1 cut(s) 148
BspTNI GGTCTC 1 cut(s) 467
BsrDI GCAATG 1 cut(s) 932
BsrFI RCCGGY 2 cut(s) 873, 1050
BsrI ACTGG 2 cut(s) 289, 1017
BssAI RCCGGY 2 cut(s) 873, 1050
BssECI CCNNGG 5 cut(s) 79, 164, 315, 818, 1162
BssMI GATC 6 cut(s) 356, 588, 688, 745, 941, 1345
BssNAI GTATAC 1 cut(s) 367
BssT1I CCWWGG 3 cut(s) 79, 164, 818
Bst1107I GTATAC 1 cut(s) 367
Bst2UI CCWGG 4 cut(s) 279, 317, 909, 1163
Bst4CI ACNGT 4 cut(s) 500, 538, 961, 1082
Bst6I CTCTTC 5 cut(s) 15, 148, 465, 696, 1083
BstAPI GCANNNNNTGC 1 cut(s) 1115
BstBAI YACGTR 1 cut(s) 431
BstC8I GCNNGC 4 cut(s) 144, 175, 1275, 1300
BstDEI CTNAG 4 cut(s) 134, 390, 1071, 1268
BstF5I GGATG 3 cut(s) 757, 1250, 1381
BstH2I RGCGCY 1 cut(s) 305
BstHHI GCGC 2 cut(s) 51, 304
BstKTI GATC 6 cut(s) 359, 591, 691, 748, 944, 1348
BstMAI GTCTC 2 cut(s) 467, 1320
BstMBI GATC 6 cut(s) 356, 588, 688, 745, 941, 1345
BstMWI GCNNNNNNNGC 5 cut(s) 167, 203, 254, 761, 1115
BstNI CCWGG 4 cut(s) 279, 317, 909, 1163
BstNSI RCATGY 1 cut(s) 1277
BstSCI CCNGG 4 cut(s) 277, 315, 907, 1161
BstSFI CTRYAG 1 cut(s) 997
BstSLI GKGCMC 1 cut(s) 1120
BstSNI TACGTA 1 cut(s) 431
BstV1I GCAGC 6 cut(s) 58, 157, 170, 193, 742, 1420
BstV2I GAAGAC 1 cut(s) 1377
BstX2I RGATCY 3 cut(s) 356, 941, 1345
BstXI CCANNNNNNTGG 1 cut(s) 323
BstYI RGATCY 3 cut(s) 356, 941, 1345
BstZ17I GTATAC 1 cut(s) 367
Bsu36I CCTNAGG 1 cut(s) 1268
BsuI GTATCC 1 cut(s) 1354
BsuRI GGCC 5 cut(s) 78, 197, 780, 1016, 1176
BtsCI GGATG 3 cut(s) 757, 1250, 1381
BtsI GCAGTG 1 cut(s) 737
BtsIMutI CAGTG 2 cut(s) 737, 957
BveI ACCTGC 1 cut(s) 1303
Cac8I GCNNGC 4 cut(s) 144, 175, 1275, 1300
CfoI GCGC 2 cut(s) 51, 304
Cfr10I RCCGGY 2 cut(s) 873, 1050
Cfr13I GGNCC 4 cut(s) 272, 565, 1048, 1082
CseI GACGC 1 cut(s) 590
Csp6I GTAC 3 cut(s) 905, 1078, 1420
CspAI ACCGGT 2 cut(s) 873, 1050
CspCI CAANNNNNGTGG 4 cut(s) 667, 702, 1287, 1322
CviAII CATG 4 cut(s) 515, 743, 1201, 1274
CviQI GTAC 3 cut(s) 905, 1078, 1420
DdeI CTNAG 4 cut(s) 134, 390, 1071, 1268
DpnI GATC 6 cut(s) 358, 590, 690, 747, 943, 1347
DpnII GATC 6 cut(s) 356, 588, 688, 745, 941, 1345
DriI GACNNNNNGTC 1 cut(s) 1080
EaeI YGGCCR 2 cut(s) 778, 1014
Eam1104I CTCTTC 5 cut(s) 15, 148, 465, 696, 1083
Eam1105I GACNNNNNGTC 1 cut(s) 1080
EarI CTCTTC 5 cut(s) 15, 148, 465, 696, 1083
EciI GGCGGA 1 cut(s) 1358
Eco105I TACGTA 1 cut(s) 431
Eco130I CCWWGG 3 cut(s) 79, 164, 818
Eco147I AGGCCT 1 cut(s) 78
Eco31I GGTCTC 1 cut(s) 467
Eco47I GGWCC 4 cut(s) 272, 565, 1048, 1082
Eco47III AGCGCT 1 cut(s) 303
Eco57I CTGAAG 4 cut(s) 381, 578, 1107, 1371
Eco81I CCTNAGG 1 cut(s) 1268
EcoRII CCWGG 4 cut(s) 277, 315, 907, 1161
EcoT14I CCWWGG 3 cut(s) 79, 164, 818
ErhI CCWWGG 3 cut(s) 79, 164, 818
FaeI CATG 4 cut(s) 518, 746, 1204, 1277
FalI AAGNNNNNCTT 2 cut(s) 655, 687
FaqI GGGAC 1 cut(s) 1018
FatI CATG 4 cut(s) 514, 742, 1200, 1273
FbaI TGATCA 1 cut(s) 588
FblI GTMKAC 2 cut(s) 366, 427
Fnu4HI GCNGC 6 cut(s) 47, 159, 171, 207, 756, 1409
FokI GGATG 3 cut(s) 764, 1257, 1388
Fsp4HI GCNGC 6 cut(s) 47, 159, 171, 207, 756, 1409
FspBI CTAG 4 cut(s) 299, 939, 1133, 1349
GlaI GCGC 2 cut(s) 50, 303
GluI GCNGC 6 cut(s) 47, 159, 171, 207, 756, 1409
GsuI CTGGAG 1 cut(s) 930
HaeII RGCGCY 1 cut(s) 305
HaeIII GGCC 5 cut(s) 78, 197, 780, 1016, 1176
HapII CCGG 2 cut(s) 874, 1051
HgaI GACGC 1 cut(s) 590
HhaI GCGC 2 cut(s) 51, 304
Hin1II CATG 4 cut(s) 518, 746, 1204, 1277
Hin6I GCGC 2 cut(s) 49, 302
HinP1I GCGC 2 cut(s) 49, 302
HincII GTYRAC 2 cut(s) 871, 1039
HindII GTYRAC 2 cut(s) 871, 1039
HpaI GTTAAC 1 cut(s) 871
HpaII CCGG 2 cut(s) 874, 1051
HphI GGTGA 6 cut(s) 22, 134, 463, 623, 1069, 1284
Hpy166II GTNNAC 6 cut(s) 33, 367, 428, 871, 1039, 1118
Hpy188I TCNGA 7 cut(s) 264, 361, 376, 807, 978, 1067, 1074
Hpy188III TCNNGA 6 cut(s) 86, 692, 749, 1085, 1349, 1373
Hpy8I GTNNAC 6 cut(s) 33, 367, 428, 871, 1039, 1118
HpyAV CCTTC 1 cut(s) 881
HpyCH4III ACNGT 4 cut(s) 500, 538, 961, 1082
HpyCH4IV ACGT 4 cut(s) 126, 430, 732, 1076
HpyCH4V TGCA 8 cut(s) 146, 742, 758, 764, 999, 1118, 1298, 1338
HpyF10VI GCNNNNNNNGC 5 cut(s) 167, 203, 254, 761, 1115
HpyF3I CTNAG 4 cut(s) 134, 390, 1071, 1268
HpySE526I ACGT 4 cut(s) 126, 430, 732, 1076
Hsp92II CATG 4 cut(s) 518, 746, 1204, 1277
HspAI GCGC 2 cut(s) 49, 302
Ksp22I TGATCA 1 cut(s) 588
KspAI GTTAAC 1 cut(s) 871
Kzo9I GATC 6 cut(s) 356, 588, 688, 745, 941, 1345
LguI GCTCTTC 1 cut(s) 148
LmnI GCTCC 3 cut(s) 319, 641, 898
Lsp1109I GCAGC 6 cut(s) 58, 157, 170, 193, 742, 1420
LweI GCATC 4 cut(s) 658, 742, 1235, 1366
MaeI CTAG 4 cut(s) 299, 939, 1133, 1349
MaeII ACGT 4 cut(s) 126, 430, 732, 1076
MaeIII GTNAC 6 cut(s) 122, 451, 484, 733, 1216, 1290
MalI GATC 6 cut(s) 358, 590, 690, 747, 943, 1347
MboI GATC 6 cut(s) 356, 588, 688, 745, 941, 1345
MflI RGATCY 3 cut(s) 356, 941, 1345
MhlI GDGCHC 1 cut(s) 1120
MlsI TGGCCA 2 cut(s) 780, 1016
MluCI AATT 3 cut(s) 406, 683, 831
MluNI TGGCCA 2 cut(s) 780, 1016
MmeI TCCRAC 4 cut(s) 334, 543, 1026, 1189
Mox20I TGGCCA 2 cut(s) 780, 1016
MroXI GAANNNNTTC 1 cut(s) 24
MscI TGGCCA 2 cut(s) 780, 1016
MseI TTAA 6 cut(s) 95, 381, 398, 530, 870, 1190
MslI CAYNNNNRTG 1 cut(s) 962
Msp20I TGGCCA 2 cut(s) 780, 1016
MspI CCGG 2 cut(s) 874, 1051
MspR9I CCNGG 4 cut(s) 279, 317, 909, 1163
MvaI CCWGG 4 cut(s) 279, 317, 909, 1163
MwoI GCNNNNNNNGC 5 cut(s) 167, 203, 254, 761, 1115
NdeII GATC 6 cut(s) 356, 588, 688, 745, 941, 1345
NlaIII CATG 4 cut(s) 518, 746, 1204, 1277
NlaIV GGNNCC 3 cut(s) 336, 547, 567
NmuCI GTSAC 3 cut(s) 122, 451, 1290
NspI RCATGY 1 cut(s) 1277
PaeI GCATGC 1 cut(s) 1277
PaqCI CACCTGC 1 cut(s) 1303
PceI AGGCCT 1 cut(s) 78
PciSI GCTCTTC 1 cut(s) 148
PdmI GAANNNNTTC 1 cut(s) 24
Pfl23II CGTACG 1 cut(s) 1077
PfoI TCCNGGA 1 cut(s) 277
PinAI ACCGGT 2 cut(s) 873, 1050
PkrI GCNGC 6 cut(s) 48, 160, 172, 208, 757, 1410
Ppu21I YACGTR 1 cut(s) 431
Psp6I CCWGG 4 cut(s) 277, 315, 907, 1161
PspGI CCWGG 4 cut(s) 277, 315, 907, 1161
PspLI CGTACG 1 cut(s) 1077
PspN4I GGNNCC 3 cut(s) 336, 547, 567
PspPI GGNCC 4 cut(s) 272, 565, 1048, 1082
PsrI GAACNNNNNNTAC 2 cut(s) 897, 929
PstI CTGCAG 1 cut(s) 1001
PsuI RGATCY 3 cut(s) 356, 941, 1345
RsaI GTAC 3 cut(s) 906, 1079, 1421
RsaNI GTAC 3 cut(s) 905, 1078, 1420
RseI CAYNNNNRTG 1 cut(s) 962
SapI GCTCTTC 1 cut(s) 148
SaqAI TTAA 6 cut(s) 95, 381, 398, 530, 870, 1190
SatI GCNGC 6 cut(s) 47, 159, 171, 207, 756, 1409
Sau3AI GATC 6 cut(s) 356, 588, 688, 745, 941, 1345
Sau96I GGNCC 4 cut(s) 272, 565, 1048, 1082
ScrFI CCNGG 4 cut(s) 279, 317, 909, 1163
SduI GDGCHC 1 cut(s) 1120
SfaNI GCATC 4 cut(s) 658, 742, 1235, 1366
SfcI CTRYAG 1 cut(s) 997
SinI GGWCC 4 cut(s) 272, 565, 1048, 1082
SmiMI CAYNNNNRTG 1 cut(s) 962
SmlI CTYRAG 2 cut(s) 86, 771
SmoI CTYRAG 2 cut(s) 86, 771
SnaBI TACGTA 1 cut(s) 431
SpeI ACTAGT 1 cut(s) 1132
SphI GCATGC 1 cut(s) 1277
Sse9I AATT 3 cut(s) 406, 683, 831
SseBI AGGCCT 1 cut(s) 78
SsiI CCGC 2 cut(s) 896, 1343
SspI AATATT 1 cut(s) 1256
SspMI CTAG 4 cut(s) 299, 939, 1133, 1349
StuI AGGCCT 1 cut(s) 78
StyD4I CCNGG 4 cut(s) 277, 315, 907, 1161
StyI CCWWGG 3 cut(s) 79, 164, 818
TaaI ACNGT 4 cut(s) 500, 538, 961, 1082
TaiI ACGT 4 cut(s) 129, 433, 735, 1079
TaqII GACCGA 1 cut(s) 491
TasI AATT 3 cut(s) 406, 683, 831
TatI WGTACW 1 cut(s) 1419
Tru1I TTAA 6 cut(s) 95, 381, 398, 530, 870, 1190
Tru9I TTAA 6 cut(s) 95, 381, 398, 530, 870, 1190
TscAI CASTG 2 cut(s) 744, 964
TseFI GTSAC 3 cut(s) 122, 451, 1290
TseI GCWGC 6 cut(s) 46, 158, 170, 206, 755, 1408
Tsp45I GTSAC 3 cut(s) 122, 451, 1290
TspDTI ATGAA 5 cut(s) 827, 900, 910, 1331, 1416
TspGWI ACGGA 1 cut(s) 1041
TspRI CASTG 2 cut(s) 744, 964
VneI GTGCAC 1 cut(s) 1116
VpaK11BI GGWCC 4 cut(s) 272, 565, 1048, 1082
XapI RAATTY 2 cut(s) 406, 683
XbaI TCTAGA 1 cut(s) 1348
XceI RCATGY 1 cut(s) 1277
XcmI CCANNNNNNNNNTGG 1 cut(s) 521
XmiI GTMKAC 2 cut(s) 366, 427
XmnI GAANNNNTTC 1 cut(s) 24
XspI CTAG 4 cut(s) 299, 939, 1133, 1349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.