Belongs to the RuvB family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G22330 |
| fragaria_vesca | FvH4_2g15320 FvH4_3g34140 |
| malus_domestica | MD03G1150000.v1.1 MD11G1168700.v1.1 |
| prunus_persica | Prupe.6G137000_v2.0.a1 Prupe.6G137000_v2.0.a1 |
| pyrus_communis | pycom03g10400 pycom11g14180 |
| rosa_chinensis | RchiOBHm_Chr2g0115061 RchiOBHm_Chr5g0061781 RchiOBHm_Chr5g0061991 RchiOBHm_Chr6g0278081 |
| rosa_laevigata | RLG00000013241 RLG00000035053 RLG00000035505 |
| rosa_multiflora | Rmu_sc0003709.1_g000012 |
| rosa_roxburghii | Rroxscaffold_1G00018950 Rroxscaffold_2G00125100 Rroxscaffold_2G00125770 Rroxscaffold_2G00125780 Rroxscaffold_7G00190530 |
| rosa_rugosa | Rorug05G0343700 Rorug05G0343800 Rorug05G0343800 Rorug05G0345300 Rorug06G0114600.1 Rorug06G0114700 |
| rosa_samantha | Rh2AG251400 Rh2CG256000 Rh2DG259300 Rh5AG404600 Rh5AG406600 Rh5BG417700 Rh5CG442100 Rh5DG431800 Rh6AG224500 Rh6BG228500 Rh6CG230900 Rh6DG222000 |
| rosa_wichuraiana | Rw5G038010 Rw6G019600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 1 cut(s) | 127 |
| AluBI | AGCT | 1 cut(s) | 139 |
| AluI | AGCT | 1 cut(s) | 139 |
| AoxI | GGCC | 1 cut(s) | 76 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 24 |
| AspLEI | GCGC | 2 cut(s) | 51, 120 |
| AsuHPI | GGTGA | 1 cut(s) | 22 |
| BfoI | RGCGCY | 1 cut(s) | 121 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 111 |
| BmiI | GGNNCC | 1 cut(s) | 132 |
| BmsI | GCATC | 1 cut(s) | 60 |
| Bpu10I | CCTNAGC | 1 cut(s) | 126 |
| BpuEI | CTTGAG | 1 cut(s) | 107 |
| BsaJI | CCNNGG | 1 cut(s) | 79 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 127 |
| BseDI | CCNNGG | 1 cut(s) | 79 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 127 |
| BseYI | CCCAGC | 1 cut(s) | 135 |
| BshFI | GGCC | 1 cut(s) | 78 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 127 |
| BsnI | GGCC | 1 cut(s) | 78 |
| BspANI | GGCC | 1 cut(s) | 78 |
| BspLI | GGNNCC | 1 cut(s) | 132 |
| BssECI | CCNNGG | 1 cut(s) | 79 |
| BssT1I | CCWWGG | 1 cut(s) | 79 |
| Bst6I | CTCTTC | 1 cut(s) | 15 |
| BstC8I | GCNNGC | 1 cut(s) | 116 |
| BstDEI | CTNAG | 1 cut(s) | 126 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 125 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstH2I | RGCGCY | 1 cut(s) | 121 |
| BstHHI | GCGC | 2 cut(s) | 51, 120 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 111 |
| BsuRI | GGCC | 1 cut(s) | 78 |
| BtgZI | GCGATG | 1 cut(s) | 37 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| Cac8I | GCNNGC | 1 cut(s) | 116 |
| CfoI | GCGC | 2 cut(s) | 51, 120 |
| CviJI | RGCY | 4 cut(s) | 78, 92, 131, 139 |
| CviKI_1 | RGCY | 4 cut(s) | 78, 92, 131, 139 |
| DdeI | CTNAG | 1 cut(s) | 126 |
| DraI | TTTAAA | 1 cut(s) | 156 |
| Eam1104I | CTCTTC | 1 cut(s) | 15 |
| EarI | CTCTTC | 1 cut(s) | 15 |
| Eco130I | CCWWGG | 1 cut(s) | 79 |
| Eco147I | AGGCCT | 1 cut(s) | 78 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 125 |
| EcoT14I | CCWWGG | 1 cut(s) | 79 |
| ErhI | CCWWGG | 1 cut(s) | 79 |
| FokI | GGATG | 1 cut(s) | 17 |
| GlaI | GCGC | 2 cut(s) | 50, 119 |
| GsaI | CCCAGC | 1 cut(s) | 139 |
| HaeII | RGCGCY | 1 cut(s) | 121 |
| HaeIII | GGCC | 1 cut(s) | 78 |
| HhaI | GCGC | 2 cut(s) | 51, 120 |
| Hin6I | GCGC | 2 cut(s) | 49, 118 |
| HinP1I | GCGC | 2 cut(s) | 49, 118 |
| HincII | GTYRAC | 1 cut(s) | 33 |
| HindII | GTYRAC | 1 cut(s) | 33 |
| HphI | GGTGA | 1 cut(s) | 22 |
| Hpy166II | GTNNAC | 1 cut(s) | 33 |
| Hpy188III | TCNNGA | 1 cut(s) | 86 |
| Hpy8I | GTNNAC | 1 cut(s) | 33 |
| HpyCH4IV | ACGT | 1 cut(s) | 96 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 111 |
| HpyF3I | CTNAG | 1 cut(s) | 126 |
| HpySE526I | ACGT | 1 cut(s) | 96 |
| HspAI | GCGC | 2 cut(s) | 49, 118 |
| LmnI | GCTCC | 1 cut(s) | 136 |
| LpnPI | CCDG | 1 cut(s) | 149 |
| LweI | GCATC | 1 cut(s) | 60 |
| MaeII | ACGT | 1 cut(s) | 96 |
| MboII | GAAGA | 2 cut(s) | 32, 55 |
| MnlI | CCTC | 4 cut(s) | 16, 82, 116, 155 |
| MroXI | GAANNNNTTC | 1 cut(s) | 24 |
| MseI | TTAA | 1 cut(s) | 155 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 111 |
| NlaIV | GGNNCC | 1 cut(s) | 132 |
| PceI | AGGCCT | 1 cut(s) | 78 |
| PdmI | GAANNNNTTC | 1 cut(s) | 24 |
| PspFI | CCCAGC | 1 cut(s) | 135 |
| PspN4I | GGNNCC | 1 cut(s) | 132 |
| SaqAI | TTAA | 1 cut(s) | 155 |
| SetI | ASST | 4 cut(s) | 12, 27, 99, 141 |
| SfaNI | GCATC | 1 cut(s) | 60 |
| SgeI | CNNG | 7 cut(s) | 52, 72, 92, 98, 127, 134, 148 |
| SmlI | CTYRAG | 1 cut(s) | 86 |
| SmoI | CTYRAG | 1 cut(s) | 86 |
| SseBI | AGGCCT | 1 cut(s) | 78 |
| StuI | AGGCCT | 1 cut(s) | 78 |
| StyI | CCWWGG | 1 cut(s) | 79 |
| TaiI | ACGT | 1 cut(s) | 99 |
| Tru1I | TTAA | 1 cut(s) | 155 |
| Tru9I | TTAA | 1 cut(s) | 155 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 125 |
| XmnI | GAANNNNTTC | 1 cut(s) | 24 |