DENN domain and WD repeat-containing protein SCD1
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0150541 RchiOBHm_Chr3g0491251 RchiOBHm_Chr5g0051891 |
| rosa_multiflora | Rmu_co8305513.1_g000001 Rmu_sc0000147.1_g000063 |
| rosa_roxburghii | Rroxscaffold_4G00294790 Rroxscaffold_5G00348390 Rroxscaffold_5G00366660 Rroxscaffold_6G00392110 Rroxscaffold_7G00199170 |
| rosa_rugosa | Rorug04G0059000 Rorug04G0059100 Rorug04G0059100 Rorug04G0059200 |
| rosa_samantha | Rh1AG138900 Rh1CG130900 Rh3AG297800 Rh3CG330800 Rh5AG452800 Rh5BG359300 |
| rosa_wichuraiana | Rw2G039400 Rw3G026280 Rw6G005350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 234 |
| AgsI | TTSAA | 1 cut(s) | 21 |
| AjnI | CCWGG | 1 cut(s) | 76 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 210, 242 |
| AluBI | AGCT | 2 cut(s) | 155, 200 |
| AluI | AGCT | 2 cut(s) | 155, 200 |
| AoxI | GGCC | 2 cut(s) | 241, 250 |
| ApeKI | GCWGC | 1 cut(s) | 197 |
| AspS9I | GGNCC | 1 cut(s) | 251 |
| AsuHPI | GGTGA | 1 cut(s) | 124 |
| BbvI | GCAGC | 1 cut(s) | 209 |
| BccI | CCATC | 1 cut(s) | 59 |
| BciT130I | CCWGG | 1 cut(s) | 78 |
| BfaI | CTAG | 2 cut(s) | 230, 298 |
| BfmI | CTRYAG | 1 cut(s) | 195 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 249 |
| BisI | GCNGC | 1 cut(s) | 198 |
| BlsI | GCNGC | 1 cut(s) | 199 |
| BmcAI | AGTACT | 1 cut(s) | 234 |
| Bme1390I | CCNGG | 1 cut(s) | 78 |
| BmgT120I | GGNCC | 1 cut(s) | 251 |
| BmrFI | CCNGG | 1 cut(s) | 78 |
| BpmI | CTGGAG | 1 cut(s) | 60 |
| Bse1I | ACTGG | 1 cut(s) | 253 |
| BseBI | CCWGG | 1 cut(s) | 78 |
| BseNI | ACTGG | 1 cut(s) | 253 |
| BseXI | GCAGC | 1 cut(s) | 209 |
| BshFI | GGCC | 2 cut(s) | 243, 252 |
| BslFI | GGGAC | 1 cut(s) | 184 |
| BsmFI | GGGAC | 1 cut(s) | 184 |
| BsnI | GGCC | 2 cut(s) | 243, 252 |
| Bsp143I | GATC | 1 cut(s) | 294 |
| BspANI | GGCC | 2 cut(s) | 243, 252 |
| BspHI | TCATGA | 1 cut(s) | 148 |
| BspMAI | CTGCAG | 1 cut(s) | 199 |
| BsrI | ACTGG | 1 cut(s) | 253 |
| BssMI | GATC | 1 cut(s) | 294 |
| Bst2UI | CCWGG | 1 cut(s) | 78 |
| BstC8I | GCNNGC | 1 cut(s) | 107 |
| BstDEI | CTNAG | 1 cut(s) | 236 |
| BstKTI | GATC | 1 cut(s) | 297 |
| BstMBI | GATC | 1 cut(s) | 294 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 249 |
| BstNI | CCWGG | 1 cut(s) | 78 |
| BstSCI | CCNGG | 1 cut(s) | 76 |
| BstSFI | CTRYAG | 1 cut(s) | 195 |
| BstV1I | GCAGC | 1 cut(s) | 209 |
| BstX2I | RGATCY | 1 cut(s) | 294 |
| BstYI | RGATCY | 1 cut(s) | 294 |
| BsuRI | GGCC | 2 cut(s) | 243, 252 |
| BtsI | GCAGTG | 1 cut(s) | 258 |
| BtsIMutI | CAGTG | 1 cut(s) | 258 |
| Cac8I | GCNNGC | 1 cut(s) | 107 |
| CciI | TCATGA | 1 cut(s) | 148 |
| Cfr13I | GGNCC | 1 cut(s) | 251 |
| Csp6I | GTAC | 1 cut(s) | 233 |
| CviAII | CATG | 1 cut(s) | 149 |
| CviJI | RGCY | 5 cut(s) | 72, 155, 200, 243, 252 |
| CviKI_1 | RGCY | 5 cut(s) | 72, 155, 200, 243, 252 |
| CviQI | GTAC | 1 cut(s) | 233 |
| DdeI | CTNAG | 1 cut(s) | 236 |
| DpnI | GATC | 1 cut(s) | 296 |
| DpnII | GATC | 1 cut(s) | 294 |
| EcoRII | CCWGG | 1 cut(s) | 76 |
| FaeI | CATG | 1 cut(s) | 152 |
| FaiI | YATR | 4 cut(s) | 116, 137, 150, 246 |
| FaqI | GGGAC | 1 cut(s) | 184 |
| FatI | CATG | 1 cut(s) | 148 |
| Fnu4HI | GCNGC | 1 cut(s) | 198 |
| Fsp4HI | GCNGC | 1 cut(s) | 198 |
| FspBI | CTAG | 2 cut(s) | 230, 298 |
| GluI | GCNGC | 1 cut(s) | 198 |
| GsuI | CTGGAG | 1 cut(s) | 60 |
| HaeIII | GGCC | 2 cut(s) | 243, 252 |
| Hin1II | CATG | 1 cut(s) | 152 |
| HphI | GGTGA | 1 cut(s) | 124 |
| Hpy188I | TCNGA | 1 cut(s) | 64 |
| Hpy188III | TCNNGA | 1 cut(s) | 149 |
| HpyCH4V | TGCA | 2 cut(s) | 109, 197 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 249 |
| HpyF3I | CTNAG | 1 cut(s) | 236 |
| Hsp92II | CATG | 1 cut(s) | 152 |
| Kzo9I | GATC | 1 cut(s) | 294 |
| LpnPI | CCDG | 5 cut(s) | 37, 63, 90, 186, 234 |
| Lsp1109I | GCAGC | 1 cut(s) | 209 |
| MaeI | CTAG | 2 cut(s) | 230, 298 |
| MaeIII | GTNAC | 1 cut(s) | 274 |
| MalI | GATC | 1 cut(s) | 296 |
| MboI | GATC | 1 cut(s) | 294 |
| MboII | GAAGA | 1 cut(s) | 220 |
| MflI | RGATCY | 1 cut(s) | 294 |
| MluCI | AATT | 4 cut(s) | 16, 96, 138, 188 |
| MnlI | CCTC | 2 cut(s) | 233, 276 |
| MseI | TTAA | 1 cut(s) | 29 |
| MspA1I | CMGCKG | 1 cut(s) | 200 |
| MspR9I | CCNGG | 1 cut(s) | 78 |
| MvaI | CCWGG | 1 cut(s) | 78 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 249 |
| NdeII | GATC | 1 cut(s) | 294 |
| NlaIII | CATG | 1 cut(s) | 152 |
| PagI | TCATGA | 1 cut(s) | 148 |
| PkrI | GCNGC | 1 cut(s) | 199 |
| Psp6I | CCWGG | 1 cut(s) | 76 |
| PspGI | CCWGG | 1 cut(s) | 76 |
| PspPI | GGNCC | 1 cut(s) | 251 |
| PstI | CTGCAG | 1 cut(s) | 199 |
| PsuI | RGATCY | 1 cut(s) | 294 |
| PvuII | CAGCTG | 1 cut(s) | 200 |
| RsaI | GTAC | 1 cut(s) | 234 |
| RsaNI | GTAC | 1 cut(s) | 233 |
| SaqAI | TTAA | 1 cut(s) | 29 |
| SatI | GCNGC | 1 cut(s) | 198 |
| Sau3AI | GATC | 1 cut(s) | 294 |
| Sau96I | GGNCC | 1 cut(s) | 251 |
| ScaI | AGTACT | 1 cut(s) | 234 |
| ScrFI | CCNGG | 1 cut(s) | 78 |
| SetI | ASST | 3 cut(s) | 82, 157, 202 |
| SfcI | CTRYAG | 1 cut(s) | 195 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 249 |
| Sse9I | AATT | 4 cut(s) | 16, 96, 138, 188 |
| SspMI | CTAG | 2 cut(s) | 230, 298 |
| StyD4I | CCNGG | 1 cut(s) | 76 |
| TaqI | TCGA | 1 cut(s) | 124 |
| TasI | AATT | 4 cut(s) | 16, 96, 138, 188 |
| TatI | WGTACW | 1 cut(s) | 232 |
| Tru1I | TTAA | 1 cut(s) | 29 |
| Tru9I | TTAA | 1 cut(s) | 29 |
| TscAI | CASTG | 1 cut(s) | 265 |
| TseI | GCWGC | 1 cut(s) | 197 |
| TspDTI | ATGAA | 2 cut(s) | 165, 177 |
| TspRI | CASTG | 1 cut(s) | 265 |
| XspI | CTAG | 2 cut(s) | 230, 298 |
| ZrmI | AGTACT | 1 cut(s) | 234 |