Exosome complex component
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RNase_PH | PF01138 | 5 - 61 | 2.3e-11 | 3' exoribonuclease family, domain 1 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 287 |
| AclWI | GGATC | 1 cut(s) | 224 |
| AcsI | RAATTY | 1 cut(s) | 23 |
| AluBI | AGCT | 3 cut(s) | 47, 267, 294 |
| AluI | AGCT | 3 cut(s) | 47, 267, 294 |
| Alw26I | GTCTC | 1 cut(s) | 214 |
| AlwI | GGATC | 1 cut(s) | 224 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 212 |
| ApoI | RAATTY | 1 cut(s) | 23 |
| AspS9I | GGNCC | 1 cut(s) | 13 |
| AvaII | GGWCC | 1 cut(s) | 13 |
| BccI | CCATC | 1 cut(s) | 254 |
| BcoDI | GTCTC | 1 cut(s) | 214 |
| BfaI | CTAG | 4 cut(s) | 156, 161, 167, 221 |
| BfmI | CTRYAG | 1 cut(s) | 138 |
| BfuAI | ACCTGC | 1 cut(s) | 287 |
| Bme18I | GGWCC | 1 cut(s) | 13 |
| BmgT120I | GGNCC | 1 cut(s) | 13 |
| BmsI | GCATC | 2 cut(s) | 24, 163 |
| BseGI | GGATG | 1 cut(s) | 100 |
| BseMII | CTCAG | 1 cut(s) | 219 |
| BsmAI | GTCTC | 1 cut(s) | 214 |
| Bsp143I | GATC | 2 cut(s) | 130, 229 |
| BspCNI | CTCAG | 1 cut(s) | 218 |
| BspMI | ACCTGC | 1 cut(s) | 287 |
| BspPI | GGATC | 1 cut(s) | 224 |
| BssMI | GATC | 2 cut(s) | 130, 229 |
| Bst4CI | ACNGT | 1 cut(s) | 91 |
| BstDEI | CTNAG | 2 cut(s) | 205, 290 |
| BstF5I | GGATG | 1 cut(s) | 100 |
| BstKTI | GATC | 2 cut(s) | 133, 232 |
| BstMAI | GTCTC | 1 cut(s) | 214 |
| BstMBI | GATC | 2 cut(s) | 130, 229 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 161 |
| BstNSI | RCATGY | 1 cut(s) | 286 |
| BstSFI | CTRYAG | 1 cut(s) | 138 |
| BtsCI | GGATG | 1 cut(s) | 100 |
| BtsI | GCAGTG | 1 cut(s) | 133 |
| BtsIMutI | CAGTG | 1 cut(s) | 133 |
| BveI | ACCTGC | 1 cut(s) | 287 |
| CaiI | CAGNNNCTG | 1 cut(s) | 212 |
| Cfr13I | GGNCC | 1 cut(s) | 13 |
| CviAII | CATG | 2 cut(s) | 150, 283 |
| CviJI | RGCY | 4 cut(s) | 47, 164, 267, 294 |
| CviKI_1 | RGCY | 4 cut(s) | 47, 164, 267, 294 |
| DdeI | CTNAG | 2 cut(s) | 205, 290 |
| DpnI | GATC | 2 cut(s) | 132, 231 |
| DpnII | GATC | 2 cut(s) | 130, 229 |
| Eco47I | GGWCC | 1 cut(s) | 13 |
| FaeI | CATG | 2 cut(s) | 153, 286 |
| FaiI | YATR | 4 cut(s) | 42, 151, 192, 284 |
| FatI | CATG | 2 cut(s) | 149, 282 |
| FokI | GGATG | 1 cut(s) | 107 |
| FspBI | CTAG | 4 cut(s) | 156, 161, 167, 221 |
| Hin1II | CATG | 2 cut(s) | 153, 286 |
| HindIII | AAGCTT | 2 cut(s) | 45, 265 |
| HinfI | GANTC | 1 cut(s) | 116 |
| Hpy166II | GTNNAC | 1 cut(s) | 217 |
| Hpy188I | TCNGA | 1 cut(s) | 13 |
| Hpy8I | GTNNAC | 1 cut(s) | 217 |
| HpyCH4III | ACNGT | 1 cut(s) | 91 |
| HpyCH4V | TGCA | 4 cut(s) | 59, 104, 176, 282 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 161 |
| HpyF3I | CTNAG | 2 cut(s) | 205, 290 |
| Hsp92II | CATG | 2 cut(s) | 153, 286 |
| Kzo9I | GATC | 2 cut(s) | 130, 229 |
| LpnPI | CCDG | 4 cut(s) | 105, 150, 246, 292 |
| LweI | GCATC | 2 cut(s) | 24, 163 |
| MaeI | CTAG | 4 cut(s) | 156, 161, 167, 221 |
| MaeIII | GTNAC | 2 cut(s) | 251, 285 |
| MalI | GATC | 2 cut(s) | 132, 231 |
| MboI | GATC | 2 cut(s) | 130, 229 |
| MboII | GAAGA | 3 cut(s) | 21, 125, 257 |
| MluCI | AATT | 1 cut(s) | 23 |
| MnlI | CCTC | 3 cut(s) | 46, 214, 235 |
| MseI | TTAA | 1 cut(s) | 269 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 161 |
| NdeII | GATC | 2 cut(s) | 130, 229 |
| NlaIII | CATG | 2 cut(s) | 153, 286 |
| NmuCI | GTSAC | 1 cut(s) | 285 |
| NspI | RCATGY | 1 cut(s) | 286 |
| PfeI | GAWTC | 1 cut(s) | 116 |
| PspPI | GGNCC | 1 cut(s) | 13 |
| PstNI | CAGNNNCTG | 1 cut(s) | 212 |
| SaqAI | TTAA | 1 cut(s) | 269 |
| Sau3AI | GATC | 2 cut(s) | 130, 229 |
| Sau96I | GGNCC | 1 cut(s) | 13 |
| SetI | ASST | 6 cut(s) | 49, 198, 222, 269, 281, 296 |
| SfaNI | GCATC | 2 cut(s) | 24, 163 |
| SfcI | CTRYAG | 1 cut(s) | 138 |
| SinI | GGWCC | 1 cut(s) | 13 |
| Sse9I | AATT | 1 cut(s) | 23 |
| SspI | AATATT | 1 cut(s) | 66 |
| SspMI | CTAG | 4 cut(s) | 156, 161, 167, 221 |
| TaaI | ACNGT | 1 cut(s) | 91 |
| TaqI | TCGA | 1 cut(s) | 32 |
| TasI | AATT | 1 cut(s) | 23 |
| TfiI | GAWTC | 1 cut(s) | 116 |
| Tru1I | TTAA | 1 cut(s) | 269 |
| Tru9I | TTAA | 1 cut(s) | 269 |
| TscAI | CASTG | 1 cut(s) | 133 |
| TseFI | GTSAC | 1 cut(s) | 285 |
| Tsp45I | GTSAC | 1 cut(s) | 285 |
| TspDTI | ATGAA | 1 cut(s) | 29 |
| TspRI | CASTG | 1 cut(s) | 133 |
| VpaK11BI | GGWCC | 1 cut(s) | 13 |
| XapI | RAATTY | 1 cut(s) | 23 |
| XceI | RCATGY | 1 cut(s) | 286 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 88 |
| XspI | CTAG | 4 cut(s) | 156, 161, 167, 221 |