Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001506

Physical Location & Seq

Genomic Coordinates Reverse (-)

37568831 .. 37571542

Gene Structure 2712 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0316000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2544 bp

ATGGCTGAAGTTGTGGGTGGAGCTTTTCTCTCTTCTGCTCTTGCTGTTCTGTTTGATAGGATGGCTTCCCGTCCGGTTCTTGACTTCATCCGAGGAAAGAAGACCACCGCTGGGCTGCTCGATGAGTTGAAGATGAAGTTGTTGTCGGTTAATAAGTTGCTCGATGATGCAGAGGAGAAGCAACTCAGAGACTCTAGAGTCAGGGAATGGCTTAATGAGCTTAAAGATGTTCTCTTTCATGCCGATGACCTGTTGGATGACATCAAGACTGAAGCTCTGCGTTGCAAGATGGAACAAGAAGATTCTGGAAGCAGCCGCATAAATCAGGTGTTAAGGGGACTCAAGTTTAGTTCTATTTCCATTCATAAATTTAACAAAAGTCTGGAATCCAGGATACGGTATATTCTTAAAAGACTACAACTTATTGTCGACGGAAAAGATGGGCTTGATTTGAAAGATGGTGTTAAGGATAGACCACAAGGACTGCCTATGAGTTCTGTGGTAGAAGAGTCTAGTGTATTTGGACGCGATGAAGAAAAGGAGGCCATTATCAGGTTATTGTTAGCGGATGTAGAATTTGATGTTATCAAAATAACACAGACAATTTATGGGAAGGTCACTTCACAAACTTGTAACATCACAGATCTAGACATGCTTCAAGTTGAACTAAAGAAGGCGTTGTCAGGGAAGAAATTTCTGTTTGTTCTTGATGATGTTTGGGATGTGAATTTAACGAAGTGGGATCGCTTGAGCCGACCCTTTGAGAGTGGAGGTCATGGAAGTAAGATCATTGTCACAACACGTGATGAAGGTGTCGCAGGCAAGATGGGTACCCTTCAAAGTCAACATCTAATGCAACTAACAGAGGAAGACTGCTGGTCGTTGTTCTCAAAACATGCCTTCTGGAATGGAGGAGATCCGTCGCTTGAAGTGATTGGAAAACAGATTGTTCAAAAGTGTAAAGGACTCCCTTTAGCTGCAAAATCACTTGGGGGTCTTTTACGTTCTGAACGAAGGATTGAAAATTGGAAAGAAATATTGAACAATGACATATGGGAGAATGAGGAGAATGACATTTCGCCTGCTCTATGGTTGAGCTACCATTATCTACCTCCACATCTGAAGCGTTGTTTTGCTTACTGTTCCATATTTCCTCAAGATTATGAGTTTCACAAATCGAAGCTGGTTTTGTTGTGGATGGCTGAAGATCTCTTACCACTGAAAAGTCTGAAATCGAATACTACAATAGAAAAGTTCGGAGATAAGTGCTTTGATCATCTAGTGTCAAGGTCATTTTTTCAACATGTACCTAATCACTTTTCTGGTAAGGCAGTTTTCACAATGCATGACCTTATCCATGACTTAGCAAAGTTTGTCTCCGGAGAGTTTTGTGTTAGGTTGGAGGACAATGACTCAGTGCCGGAAAATGTTAGCAAGAGTCGTCACTTTTCGTGTGCAACTGGCAGTTTTGATCAATGGGACAGTTTGTATGAAGCCAAGTATTTGAGGACCTTCATAGTGTCAGATTGTCACCTCAGGAAACATTTTGATGTATTCCTGAAGCTTCGGTGTTTAAGAGTGCTCAAGTTATCGGGGTACCATAATCGTGAGCTGCCTAGTTCAATTAGCAAGTTGAAGCATCTGAGGCACTTTGACTTGTCTGAGTCGTCAATTAAAAAGTTACCTGATGCAACGTGTACTCTATATAATTTACAGACGTTATTGTTGTCGTTTTGTAGCAATCTAGTTGAATTGCCAACTGATTTGGGAAGATTAATCAACTTGCGTCATCTTGATATTAGAGGCACAGACATAGAAAAGATGCCACCAAGGATGGGCAAAATGAAAGATCTCCAAACATTAAGAGGTTGGTTTGTCCTAGACAAATACACTGGTGATAACATTGTCGAGATTAAAGAGCTTCAGCAGTTGCGCGGAAGACTTTGGATCTCGGGGCTTCGCAATATTGTGCATGTCACAGATGCCATTATGAGAAAGAAGGAGCATCTGGATGAATTAGTTTTGGAATGGGGAGGCAAGTCTGCTGATGACACCGACGATACACAAAAACAGAGAGATGTGCTGGAGAACCTCCAACCTCATACAAACCTTAAAAAACTCGAGATTCGATCTTATGGGGGCACAAGATTTCCAGTCTTGAGCTTCTGGATTGCGGAAATTGTTTGTCCTTGCCACCAGTTGAGCAGCTACCCTCCCTCCAAGAGCTTTGAGGGATGTGAACAAGTTGTAGATTCATTTCCAGACGAGGGGCTGCTGCCCACCACTCTCGGAGAACTCCGCATCTACAGTATTTCGAAGTTGGACGGCAAGGGGTTTAGACAACTCACCTCTCTTAAAGAGTTGTCAATTCACAATTGCCCTGAACTCCGGTGCTTGCCAGATGAAGGGCTACCCACTTCTCTTTCTTCTCTGGACATCTATGATTGTCCTTTACTAGAACAACGTTGCCAGAGAGAGACAGGGGAAGATTGGCCCAAGATTGCTCACATCAAGACCATTCGAATCGATTTCGAAGATATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000176 GO:0000177 GO:0000178 GO:0000291 GO:0000956 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008408 GO:0009056 GO:0009057 GO:0009791 GO:0009845 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016074 GO:0016075 GO:0016180 GO:0016787 GO:0016788 GO:0019222 GO:0019439 GO:0022613 GO:0031123 GO:0031125 GO:0031126 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034427 GO:0034470 GO:0034472 GO:0034475 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0042254 GO:0043144 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043628 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0048856 GO:0050789 GO:0060255 GO:0065007 GO:0070013 GO:0071025 GO:0071027 GO:0071028 GO:0071051 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090351 GO:1901360 GO:1901361 GO:1901575 GO:1902494 GO:1905354

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

RNase_PH RNase_PH_C

Protein Analysis

847

Amino Acids

97.03

Weight (kDa)

6.32

Isoelectric Point (pI)

47.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	9 - 101	3e-17	Rx N-terminal domain
NB-ARC	PF00931	195 - 301	3.1e-21	NB-ARC domain
WHD_DRP	PF23559	383 - 456	9.2e-23	Disease resistance protein Winged helix domain
LRR_14	PF23598	481 - 577	3e-11	Leucine-rich repeat region
LRR_14	PF23598	581 - 737	2.2e-09	Leucine-rich repeat region
LRR_R13L1-DRL21	PF25019	635 - 719	3.3e-21	R13L1/DRL21 LRRs

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001506)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27490 AT4G27490 AT4G27490 AT4G27490 AT4G27490 AT4G27490 AT4G27490
fragaria_vesca	FvH4_1g26690 FvH4_3g31780 FvH4_3g31780
malus_domestica	MD02G1274400.v1.1 MD03G1120700.v1.1 MD09G1244800.v1.1 MD11G1139300.v1.1
prunus_persica	Prupe.6G104100_v2.0.a1 Prupe.6G104100_v2.0.a1 Prupe.6G104100_v2.0.a1 Prupe.6G104100_v2.0.a1 Prupe.6G104100_v2.0.a1 Prupe.6G104100_v2.0.a1 Prupe.6G104100_v2.0.a1 Prupe.6G104100_v2.0.a1 Prupe.6G104200_v2.0.a1
pyrus_communis	pycom11g11520
rosa_chinensis	RchiOBHm_Chr1g0339161 RchiOBHm_Chr1g0339211 RchiOBHm_Chr1g0339271 RchiOBHm_Chr5g0058571
rosa_laevigata	RLG00000029217 RLG00000029222 RLG00000035234
rosa_multiflora	Rmu_sc0000367.1_g000149 Rmu_sc0001248.1_g000001 Rmu_sc0019779.1_g000001 Rmu_sc0022251.1_g000002
rosa_roxburghii	Rroxscaffold_1G00021880 Rroxscaffold_4G00313400
rosa_rugosa	Rorug01G0143400.1 Rorug01G0143500.1 Rorug05G0316000
rosa_samantha	Rh1AG160200 Rh1BG127000 Rh1BG127200 Rh1CG149500 Rh1CG149900 Rh5AG382300 Rh5BG394100 Rh5CG418000 Rh5DG409300
rosa_wichuraiana	Rw1G013490 Rw5G036000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	197
Acc65I	GGTACC	2 cut(s)	830, 1596
AccB1I	GGYRCC	2 cut(s)	830, 1596
AccI	GTMKAC	1 cut(s)	429
AccII	CGCG	2 cut(s)	528, 1935
AccIII	TCCGGA	1 cut(s)	1379
AciI	CCGC	6 cut(s)	108, 316, 566, 1935, 2174, 2299
AclI	AACGTT	1 cut(s)	2464
AclWI	GGATC	3 cut(s)	750, 911, 1955
AcsI	RAATTY	4 cut(s)	368, 575, 692, 727
AcuI	CTGAAG	6 cut(s)	27, 291, 1142, 1224, 1580, 1907
AcvI	CACGTG	1 cut(s)	803
AfaI	GTAC	4 cut(s)	832, 1308, 1598, 1699
AfiI	CCNNNNNNNGG	6 cut(s)	111, 396, 552, 1835, 2267, 2405
AflIII	ACRYGT	3 cut(s)	800, 1303, 1694
AhdI	GACNNNNNGTC	1 cut(s)	877
AjnI	CCWGG	1 cut(s)	389
Alw21I	GWGCWC	1 cut(s)	1584
Alw26I	GTCTC	3 cut(s)	183, 1381, 2471
AlwI	GGATC	3 cut(s)	750, 911, 1955
Ama87I	CYCGRG	2 cut(s)	1951, 2120
Aor13HI	TCCGGA	1 cut(s)	1379
AoxI	GGCC	2 cut(s)	543, 2492
ApeKI	GCWGC	7 cut(s)	115, 312, 977, 1612, 2205, 2272, 2275
ApoI	RAATTY	4 cut(s)	368, 575, 692, 727
AseI	ATTAAT	1 cut(s)	1775
Asp718I	GGTACC	2 cut(s)	830, 1596
AspLEI	GCGC	1 cut(s)	1935
AspS9I	GGNCC	2 cut(s)	1509, 2493
AsuHPI	GGTGA	3 cut(s)	1523, 1907, 2338
AsuII	TTCGAA	3 cut(s)	2315, 2521, 2532
AvaI	CYCGRG	2 cut(s)	1951, 2120
AvaII	GGWCC	1 cut(s)	1509
AxyI	CCTNAGG	1 cut(s)	1535
BaeGI	GKGCMC	1 cut(s)	2144
BanI	GGYRCC	2 cut(s)	830, 1596
BarI	GAAGNNNNNNTAC	2 cut(s)	1197, 1229
BbrPI	CACGTG	1 cut(s)	803
BbsI	GAAGAC	3 cut(s)	107, 876, 1945
Bbv12I	GWGCWC	1 cut(s)	1584
BbvI	GCAGC	7 cut(s)	102, 324, 964, 1599, 2217, 2259, 2262
BccI	CCATC	7 cut(s)	55, 283, 434, 452, 820, 1192, 1828
BceAI	ACGGC	1 cut(s)	2341
BciT130I	CCWGG	1 cut(s)	391
BciVI	GTATCC	1 cut(s)	387
BclI	TGATCA	2 cut(s)	1273, 1471
BcoDI	GTCTC	3 cut(s)	183, 1381, 2471
BfaI	CTAG	8 cut(s)	195, 513, 647, 1280, 1617, 1745, 1880, 2456
BfmI	CTRYAG	1 cut(s)	2305
BfuI	GTATCC	1 cut(s)	387
BglII	AGATCT	3 cut(s)	643, 1207, 1849
BisI	GCNGC	8 cut(s)	116, 313, 316, 978, 1613, 2206, 2273, 2276
BlsI	GCNGC	8 cut(s)	117, 314, 317, 979, 1614, 2207, 2274, 2277
Bme1390I	CCNGG	1 cut(s)	391
Bme18I	GGWCC	1 cut(s)	1509
BmeRI	GACNNNNNGTC	1 cut(s)	877
BmeT110I	CYCGRG	2 cut(s)	1951, 2120
BmgT120I	GGNCC	2 cut(s)	1509, 2493
BmiI	GGNNCC	2 cut(s)	832, 1598
BmrFI	CCNGG	1 cut(s)	391
BmsI	GCATC	7 cut(s)	157, 1648, 1678, 1812, 1972, 2014, 2310
BpiI	GAAGAC	3 cut(s)	107, 876, 1945
BplI	GAGNNNNNCTC	2 cut(s)	12, 44
BpmI	CTGGAG	1 cut(s)	2105
Bpu14I	TTCGAA	3 cut(s)	2315, 2521, 2532
BpuEI	CTTGAG	5 cut(s)	326, 769, 1140, 1568, 2179
Bsa29I	ATCGAT	1 cut(s)	2526
BsaAI	YACGTR	1 cut(s)	803
BsaJI	CCNNGG	2 cut(s)	91, 1829
BsaWI	WCCGGW	3 cut(s)	73, 1379, 2388
BsaXI	ACNNNNNCTCC	2 cut(s)	2201, 2231
Bsc4I	CCNNNNNNNGG	6 cut(s)	111, 396, 552, 1835, 2267, 2405
Bse1I	ACTGG	4 cut(s)	1465, 1897, 2153, 2197
Bse21I	CCTNAGG	1 cut(s)	1535
BseAI	TCCGGA	1 cut(s)	1379
BseBI	CCWGG	1 cut(s)	391
BseCI	ATCGAT	1 cut(s)	2526
BseDI	CCNNGG	2 cut(s)	91, 1829
BseGI	GGATG	9 cut(s)	66, 87, 262, 574, 727, 1203, 1839, 2017, 2240
BseLI	CCNNNNNNNGG	6 cut(s)	111, 396, 552, 1835, 2267, 2405
BseMII	CTCAG	5 cut(s)	199, 1428, 1549, 1634, 1653
BseNI	ACTGG	4 cut(s)	1465, 1897, 2153, 2197
BseRI	GAGGAG	3 cut(s)	188, 927, 1079
BseSI	GKGCMC	1 cut(s)	2144
BseXI	GCAGC	7 cut(s)	102, 324, 964, 1599, 2217, 2259, 2262
BseYI	CCCAGC	1 cut(s)	110
Bsh1236I	CGCG	2 cut(s)	528, 1935
BshFI	GGCC	2 cut(s)	545, 2494
BshNI	GGYRCC	2 cut(s)	830, 1596
BshVI	ATCGAT	1 cut(s)	2526
BsiHKAI	GWGCWC	1 cut(s)	1584
BsiHKCI	CYCGRG	2 cut(s)	1951, 2120
BsiSI	CCGG	4 cut(s)	74, 1380, 1421, 2389
BslFI	GGGAC	2 cut(s)	351, 1493
BslI	CCNNNNNNNGG	6 cut(s)	111, 396, 552, 1835, 2267, 2405
BsmAI	GTCTC	3 cut(s)	183, 1381, 2471
BsmFI	GGGAC	2 cut(s)	351, 1493
BsnI	GGCC	2 cut(s)	545, 2494
BsoBI	CYCGRG	2 cut(s)	1951, 2120
Bsp119I	TTCGAA	3 cut(s)	2315, 2521, 2532
Bsp1286I	GDGCHC	2 cut(s)	1584, 2144
Bsp13I	TCCGGA	1 cut(s)	1379
BspACI	CCGC	6 cut(s)	108, 316, 566, 1935, 2174, 2299
BspANI	GGCC	2 cut(s)	545, 2494
BspCNI	CTCAG	5 cut(s)	198, 1427, 1548, 1635, 1654
BspDI	ATCGAT	1 cut(s)	2526
BspEI	TCCGGA	1 cut(s)	1379
BspFNI	CGCG	2 cut(s)	528, 1935
BspLI	GGNNCC	2 cut(s)	832, 1598
BspPI	GGATC	3 cut(s)	750, 911, 1955
BspT104I	TTCGAA	3 cut(s)	2315, 2521, 2532
BspT107I	GGYRCC	2 cut(s)	830, 1596
BsrI	ACTGG	4 cut(s)	1465, 1897, 2153, 2197
BssECI	CCNNGG	2 cut(s)	91, 1829
BssT1I	CCWWGG	1 cut(s)	1829
Bst2UI	CCWGG	1 cut(s)	391
Bst4CI	ACNGT	4 cut(s)	399, 1142, 1484, 2309
Bst6I	CTCTTC	2 cut(s)	37, 501
BstBAI	YACGTR	1 cut(s)	803
BstBI	TTCGAA	3 cut(s)	2315, 2521, 2532
BstC8I	GCNNGC	3 cut(s)	820, 1083, 2396
BstDEI	CTNAG	6 cut(s)	185, 1363, 1414, 1535, 1643, 1662
BstF5I	GGATG	9 cut(s)	66, 87, 262, 574, 727, 1203, 1839, 2017, 2240
BstFNI	CGCG	2 cut(s)	528, 1935
BstHHI	GCGC	1 cut(s)	1935
BstMAI	GTCTC	3 cut(s)	183, 1381, 2471
BstMWI	GCNNNNNNNGC	2 cut(s)	217, 1645
BstNI	CCWGG	1 cut(s)	391
BstNSI	RCATGY	4 cut(s)	655, 899, 1307, 1976
BstSCI	CCNGG	1 cut(s)	389
BstSFI	CTRYAG	1 cut(s)	2305
BstSLI	GKGCMC	1 cut(s)	2144
BstUI	CGCG	2 cut(s)	528, 1935
BstV1I	GCAGC	7 cut(s)	102, 324, 964, 1599, 2217, 2259, 2262
BstV2I	GAAGAC	3 cut(s)	107, 876, 1945
BstX2I	RGATCY	5 cut(s)	643, 916, 1207, 1849, 1947
BstYI	RGATCY	5 cut(s)	643, 916, 1207, 1849, 1947
Bsu15I	ATCGAT	1 cut(s)	2526
Bsu36I	CCTNAGG	1 cut(s)	1535
BsuI	GTATCC	1 cut(s)	387
BsuRI	GGCC	2 cut(s)	545, 2494
BsuTUI	ATCGAT	1 cut(s)	2526
BtgZI	GCGATG	1 cut(s)	543
BtsCI	GGATG	9 cut(s)	66, 87, 262, 574, 727, 1203, 1839, 2017, 2240
BtsIMutI	CAGTG	3 cut(s)	1217, 1422, 1890
Cac8I	GCNNGC	3 cut(s)	820, 1083, 2396
CfoI	GCGC	1 cut(s)	1935
Cfr13I	GGNCC	2 cut(s)	1509, 2493
ClaI	ATCGAT	1 cut(s)	2526
CseI	GACGC	2 cut(s)	534, 1775
Csp6I	GTAC	4 cut(s)	831, 1307, 1597, 1698
CviAII	CATG	8 cut(s)	239, 652, 776, 896, 1304, 1346, 1358, 1973
CviQI	GTAC	4 cut(s)	831, 1307, 1597, 1698
DdeI	CTNAG	6 cut(s)	185, 1363, 1414, 1535, 1643, 1662
DrdI	GACNNNNNNGTC	1 cut(s)	197
DriI	GACNNNNNGTC	1 cut(s)	877
DseDI	GACNNNNNNGTC	1 cut(s)	197
Eam1104I	CTCTTC	2 cut(s)	37, 501
Eam1105I	GACNNNNNGTC	1 cut(s)	877
EarI	CTCTTC	2 cut(s)	37, 501
Eco130I	CCWWGG	1 cut(s)	1829
Eco47I	GGWCC	1 cut(s)	1509
Eco57I	CTGAAG	6 cut(s)	27, 291, 1142, 1224, 1580, 1907
Eco72I	CACGTG	1 cut(s)	803
Eco81I	CCTNAGG	1 cut(s)	1535
Eco88I	CYCGRG	2 cut(s)	1951, 2120
EcoO109I	RGGNCCY	1 cut(s)	1509
EcoRII	CCWGG	1 cut(s)	389
EcoT14I	CCWWGG	1 cut(s)	1829
EcoT22I	ATGCAT	1 cut(s)	1347
ErhI	CCWWGG	1 cut(s)	1829
FaeI	CATG	8 cut(s)	242, 655, 779, 899, 1307, 1349, 1361, 1976
FalI	AAGNNNNNCTT	2 cut(s)	429, 461
FaqI	GGGAC	2 cut(s)	351, 1493
FatI	CATG	8 cut(s)	238, 651, 775, 895, 1303, 1345, 1357, 1972
FauNDI	CATATG	1 cut(s)	1052
FbaI	TGATCA	2 cut(s)	1273, 1471
FblI	GTMKAC	1 cut(s)	429
Fnu4HI	GCNGC	8 cut(s)	116, 313, 316, 978, 1613, 2206, 2273, 2276
FokI	GGATG	9 cut(s)	73, 74, 269, 581, 734, 1210, 1846, 2024, 2247
Fsp4HI	GCNGC	8 cut(s)	116, 313, 316, 978, 1613, 2206, 2273, 2276
FspBI	CTAG	8 cut(s)	195, 513, 647, 1280, 1617, 1745, 1880, 2456
GlaI	GCGC	1 cut(s)	1934
GluI	GCNGC	8 cut(s)	116, 313, 316, 978, 1613, 2206, 2273, 2276
GsaI	CCCAGC	1 cut(s)	114
GsuI	CTGGAG	1 cut(s)	2105
HaeIII	GGCC	2 cut(s)	545, 2494
HapII	CCGG	4 cut(s)	74, 1380, 1421, 2389
HgaI	GACGC	2 cut(s)	534, 1775
HhaI	GCGC	1 cut(s)	1935
Hin1II	CATG	8 cut(s)	242, 655, 779, 899, 1307, 1349, 1361, 1976
Hin6I	GCGC	1 cut(s)	1933
HinP1I	GCGC	1 cut(s)	1933
HincII	GTYRAC	2 cut(s)	430, 845
HindII	GTYRAC	2 cut(s)	430, 845
HindIII	AAGCTT	1 cut(s)	1562
HpaII	CCGG	4 cut(s)	74, 1380, 1421, 2389
HphI	GGTGA	3 cut(s)	1523, 1907, 2338
Hpy166II	GTNNAC	4 cut(s)	430, 845, 1698, 2240
Hpy8I	GTNNAC	4 cut(s)	430, 845, 1698, 2240
Hpy99I	CGWCG	3 cut(s)	434, 925, 2060
HpyAV	CCTTC	9 cut(s)	607, 667, 803, 845, 910, 1008, 1522, 1993, 2399
HpyCH4III	ACNGT	4 cut(s)	399, 1142, 1484, 2309
HpyCH4IV	ACGT	5 cut(s)	802, 1003, 1694, 1718, 2464
HpyCH4V	TGCA	8 cut(s)	170, 285, 856, 980, 1345, 1457, 1691, 1972
HpyF10VI	GCNNNNNNNGC	2 cut(s)	217, 1645
HpyF3I	CTNAG	6 cut(s)	185, 1363, 1414, 1535, 1643, 1662
HpySE526I	ACGT	5 cut(s)	802, 1003, 1694, 1718, 2464
Hsp92II	CATG	8 cut(s)	242, 655, 779, 899, 1307, 1349, 1361, 1976
HspAI	GCGC	1 cut(s)	1933
Kpn2I	TCCGGA	1 cut(s)	1379
KpnI	GGTACC	2 cut(s)	834, 1600
Ksp22I	TGATCA	2 cut(s)	1273, 1471
LmnI	GCTCC	2 cut(s)	20, 2002
Lsp1109I	GCAGC	7 cut(s)	102, 324, 964, 1599, 2217, 2259, 2262
LweI	GCATC	7 cut(s)	157, 1648, 1678, 1812, 1972, 2014, 2310
MaeI	CTAG	8 cut(s)	195, 513, 647, 1280, 1617, 1745, 1880, 2456
MaeII	ACGT	5 cut(s)	802, 1003, 1694, 1718, 2464
MaeIII	GTNAC	7 cut(s)	616, 632, 793, 1442, 1529, 1680, 1975
MfeI	CAATTG	1 cut(s)	2374
MflI	RGATCY	5 cut(s)	643, 916, 1207, 1849, 1947
MhlI	GDGCHC	2 cut(s)	1584, 2144
MlyI	GAGTC	8 cut(s)	185, 207, 333, 518, 960, 1406, 1447, 1673
MmeI	TCCRAC	4 cut(s)	234, 1380, 2119, 2301
Mph1103I	ATGCAT	1 cut(s)	1347
MroI	TCCGGA	1 cut(s)	1379
MslI	CAYNNNNRTG	4 cut(s)	243, 1548, 1605, 2010
MspA1I	CMGCKG	1 cut(s)	110
MspI	CCGG	4 cut(s)	74, 1380, 1421, 2389
MspR9I	CCNGG	1 cut(s)	391
MunI	CAATTG	1 cut(s)	2374
MvaI	CCWGG	1 cut(s)	391
MvnI	CGCG	2 cut(s)	528, 1935
MwoI	GCNNNNNNNGC	2 cut(s)	217, 1645
NdeI	CATATG	1 cut(s)	1052
NlaIII	CATG	8 cut(s)	242, 655, 779, 899, 1307, 1349, 1361, 1976
NlaIV	GGNNCC	2 cut(s)	832, 1598
NmuCI	GTSAC	5 cut(s)	616, 793, 1442, 1529, 1975
NsiI	ATGCAT	1 cut(s)	1347
NspI	RCATGY	4 cut(s)	655, 899, 1307, 1976
NspV	TTCGAA	3 cut(s)	2315, 2521, 2532
PaeR7I	CTCGAG	1 cut(s)	2120
PciI	ACATGT	1 cut(s)	1303
PcsI	WCGNNNNNNNCGW	2 cut(s)	751, 1009
PfeI	GAWTC	5 cut(s)	302, 386, 2125, 2252, 2523
PfoI	TCCNGGA	1 cut(s)	389
PkrI	GCNGC	8 cut(s)	117, 314, 317, 979, 1614, 2207, 2274, 2277
PleI	GAGTC	8 cut(s)	185, 206, 333, 517, 960, 1406, 1446, 1672
PmaCI	CACGTG	1 cut(s)	803
PmlI	CACGTG	1 cut(s)	803
PpsI	GAGTC	8 cut(s)	185, 206, 333, 517, 960, 1406, 1446, 1672
Ppu21I	YACGTR	1 cut(s)	803
PpuMI	RGGWCCY	1 cut(s)	1509
PscI	ACATGT	1 cut(s)	1303
PshBI	ATTAAT	1 cut(s)	1775
Psp1406I	AACGTT	1 cut(s)	2464
Psp5II	RGGWCCY	1 cut(s)	1509
Psp6I	CCWGG	1 cut(s)	389
PspCI	CACGTG	1 cut(s)	803
PspFI	CCCAGC	1 cut(s)	110
PspGI	CCWGG	1 cut(s)	389
PspN4I	GGNNCC	2 cut(s)	832, 1598
PspPI	GGNCC	2 cut(s)	1509, 2493
PspPPI	RGGWCCY	1 cut(s)	1509
PsuI	RGATCY	5 cut(s)	643, 916, 1207, 1849, 1947
RsaI	GTAC	4 cut(s)	832, 1308, 1598, 1699
RsaNI	GTAC	4 cut(s)	831, 1307, 1597, 1698
RseI	CAYNNNNRTG	4 cut(s)	243, 1548, 1605, 2010
SalI	GTCGAC	1 cut(s)	428
SatI	GCNGC	8 cut(s)	116, 313, 316, 978, 1613, 2206, 2273, 2276
Sau96I	GGNCC	2 cut(s)	1509, 2493
SchI	GAGTC	8 cut(s)	185, 207, 333, 518, 960, 1406, 1447, 1673
ScrFI	CCNGG	1 cut(s)	391
SduI	GDGCHC	2 cut(s)	1584, 2144
SfaNI	GCATC	7 cut(s)	157, 1648, 1678, 1812, 1972, 2014, 2310
SfcI	CTRYAG	1 cut(s)	2305
Sfr274I	CTCGAG	1 cut(s)	2120
SfuI	TTCGAA	3 cut(s)	2315, 2521, 2532
SinI	GGWCC	1 cut(s)	1509
SlaI	CTCGAG	1 cut(s)	2120
SmiMI	CAYNNNNRTG	4 cut(s)	243, 1548, 1605, 2010
SmlI	CTYRAG	6 cut(s)	341, 748, 1155, 1583, 2120, 2158
SmoI	CTYRAG	6 cut(s)	341, 748, 1155, 1583, 2120, 2158
SsiI	CCGC	6 cut(s)	108, 316, 566, 1935, 2174, 2299
SspI	AATATT	2 cut(s)	1038, 1966
SspMI	CTAG	8 cut(s)	195, 513, 647, 1280, 1617, 1745, 1880, 2456
StyD4I	CCNGG	1 cut(s)	389
StyI	CCWWGG	1 cut(s)	1829
TaaI	ACNGT	4 cut(s)	399, 1142, 1484, 2309
TaiI	ACGT	5 cut(s)	805, 1006, 1697, 1721, 2467
TatI	WGTACW	1 cut(s)	1697
TauI	GCSGC	1 cut(s)	318
TfiI	GAWTC	5 cut(s)	302, 386, 2125, 2252, 2523
TscAI	CASTG	3 cut(s)	1224, 1422, 1897
TseFI	GTSAC	5 cut(s)	616, 793, 1442, 1529, 1975
TseI	GCWGC	7 cut(s)	115, 312, 977, 1612, 2205, 2272, 2275
Tsp45I	GTSAC	5 cut(s)	616, 793, 1442, 1529, 1975
TspGWI	ACGGA	2 cut(s)	447, 909
TspRI	CASTG	3 cut(s)	1224, 1422, 1897
VpaK11BI	GGWCC	1 cut(s)	1509
VspI	ATTAAT	1 cut(s)	1775
XapI	RAATTY	4 cut(s)	368, 575, 692, 727
XbaI	TCTAGA	2 cut(s)	194, 646
XceI	RCATGY	4 cut(s)	655, 899, 1307, 1976
XhoI	CTCGAG	1 cut(s)	2120
XmiI	GTMKAC	1 cut(s)	429
XspI	CTAG	8 cut(s)	195, 513, 647, 1280, 1617, 1745, 1880, 2456
Zsp2I	ATGCAT	1 cut(s)	1347

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.