26S proteasome non-ATPase regulatory subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g31640 |
| malus_domestica | MD01G1101600.v1.1 MD09G1210200.v1.1 MD14G1095100.v1.1 |
| pyrus_communis | pycom09g12750 pycom11g24660 pycom15g23000 |
| rosa_chinensis | RchiOBHm_Chr1g0340011 RchiOBHm_Chr1g0357081 RchiOBHm_Chr3g0486941 RchiOBHm_Chr4g0436351 |
| rosa_multiflora | Rmu_sc0006243.1_g000012 |
| rosa_roxburghii | Rroxscaffold_3G00220430 Rroxscaffold_7G00210400 |
| rosa_samantha | Rh1CG218500 Rh1CG254900 Rh2DG070500 Rh5AG243700 Rh5AG243800 Rh6BG302100 Rh7AG161900 Rh7AG282400 Rh7CG016100 Rh7CG301700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 3 cut(s) | 107, 313, 326 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 215 |
| AhlI | ACTAGT | 1 cut(s) | 214 |
| AluBI | AGCT | 2 cut(s) | 150, 266 |
| AluI | AGCT | 2 cut(s) | 150, 266 |
| ApeKI | GCWGC | 1 cut(s) | 14 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| AsuHPI | GGTGA | 2 cut(s) | 56, 144 |
| AvaII | GGWCC | 1 cut(s) | 67 |
| BcuI | ACTAGT | 1 cut(s) | 214 |
| BfaI | CTAG | 1 cut(s) | 215 |
| BisI | GCNGC | 1 cut(s) | 15 |
| BlsI | GCNGC | 1 cut(s) | 16 |
| Bme18I | GGWCC | 1 cut(s) | 67 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 215 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BmiI | GGNNCC | 1 cut(s) | 68 |
| Bse1I | ACTGG | 1 cut(s) | 10 |
| BseNI | ACTGG | 1 cut(s) | 10 |
| BslFI | GGGAC | 2 cut(s) | 80, 213 |
| BsmFI | GGGAC | 2 cut(s) | 80, 213 |
| BspHI | TCATGA | 1 cut(s) | 76 |
| BspLI | GGNNCC | 1 cut(s) | 68 |
| BsrI | ACTGG | 1 cut(s) | 10 |
| Bst4CI | ACNGT | 1 cut(s) | 144 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 107 |
| BtsIMutI | CAGTG | 1 cut(s) | 226 |
| CciI | TCATGA | 1 cut(s) | 76 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| CviAII | CATG | 2 cut(s) | 77, 203 |
| CviJI | RGCY | 5 cut(s) | 14, 110, 150, 259, 266 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 110, 150, 259, 266 |
| DriI | GACNNNNNGTC | 1 cut(s) | 215 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 215 |
| Eco32I | GATATC | 1 cut(s) | 116 |
| Eco47I | GGWCC | 1 cut(s) | 67 |
| EcoRV | GATATC | 1 cut(s) | 116 |
| FaeI | CATG | 2 cut(s) | 80, 206 |
| FaiI | YATR | 6 cut(s) | 37, 39, 41, 78, 204, 285 |
| FaqI | GGGAC | 2 cut(s) | 80, 213 |
| FatI | CATG | 2 cut(s) | 76, 202 |
| Fnu4HI | GCNGC | 1 cut(s) | 15 |
| Fsp4HI | GCNGC | 1 cut(s) | 15 |
| FspBI | CTAG | 1 cut(s) | 215 |
| GluI | GCNGC | 1 cut(s) | 15 |
| Hin1II | CATG | 2 cut(s) | 80, 206 |
| HindIII | AAGCTT | 1 cut(s) | 264 |
| HinfI | GANTC | 3 cut(s) | 53, 95, 287 |
| HphI | GGTGA | 2 cut(s) | 56, 144 |
| Hpy188III | TCNNGA | 3 cut(s) | 77, 104, 310 |
| HpyCH4III | ACNGT | 1 cut(s) | 144 |
| HpyCH4V | TGCA | 2 cut(s) | 17, 164 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 107 |
| Hsp92II | CATG | 2 cut(s) | 80, 206 |
| LmnI | GCTCC | 1 cut(s) | 32 |
| LpnPI | CCDG | 1 cut(s) | 182 |
| MaeI | CTAG | 1 cut(s) | 215 |
| MfeI | CAATTG | 1 cut(s) | 134 |
| MluCI | AATT | 3 cut(s) | 134, 273, 337 |
| MlyI | GAGTC | 1 cut(s) | 281 |
| MmeI | TCCRAC | 1 cut(s) | 10 |
| MunI | CAATTG | 1 cut(s) | 134 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 107 |
| NlaIII | CATG | 2 cut(s) | 80, 206 |
| NlaIV | GGNNCC | 1 cut(s) | 68 |
| PagI | TCATGA | 1 cut(s) | 76 |
| PfeI | GAWTC | 2 cut(s) | 53, 95 |
| PkrI | GCNGC | 1 cut(s) | 16 |
| PleI | GAGTC | 1 cut(s) | 281 |
| PpsI | GAGTC | 1 cut(s) | 281 |
| PspN4I | GGNNCC | 1 cut(s) | 68 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| SatI | GCNGC | 1 cut(s) | 15 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| SchI | GAGTC | 1 cut(s) | 281 |
| SetI | ASST | 3 cut(s) | 152, 268, 302 |
| SinI | GGWCC | 1 cut(s) | 67 |
| SpeI | ACTAGT | 1 cut(s) | 214 |
| Sse9I | AATT | 3 cut(s) | 134, 273, 337 |
| SspMI | CTAG | 1 cut(s) | 215 |
| TaaI | ACNGT | 1 cut(s) | 144 |
| TasI | AATT | 3 cut(s) | 134, 273, 337 |
| TfiI | GAWTC | 2 cut(s) | 53, 95 |
| TscAI | CASTG | 1 cut(s) | 226 |
| TseI | GCWGC | 1 cut(s) | 14 |
| TspDTI | ATGAA | 1 cut(s) | 102 |
| TspRI | CASTG | 1 cut(s) | 226 |
| VpaK11BI | GGWCC | 1 cut(s) | 67 |
| XspI | CTAG | 1 cut(s) | 215 |