helicase activity
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0358351 RchiOBHm_Chr1g0375481 RchiOBHm_Chr3g0482501 RchiOBHm_Chr4g0390221 |
| rosa_roxburghii | Rroxscaffold_1G00020020 Rroxscaffold_1G00050680 Rroxscaffold_2G00094370 Rroxscaffold_2G00146170 Rroxscaffold_3G00221700 |
| rosa_rugosa | Rorug07G0192600 |
| rosa_samantha | Rh1AG168300 Rh1AG275000 Rh1AG401900 Rh2BG094900 Rh2CG096700 Rh2CG359400 Rh2DG203700 Rh2DG226600 Rh2DG560000 Rh3AG248100 Rh4AG347000 Rh4BG103700 Rh6BG341800 Rh6DG087800 Rh7BG302200 Rh7BG324800 Rh7CG214600 |
| rosa_wichuraiana | Rw1G035680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 9 |
| AccII | CGCG | 1 cut(s) | 130 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 54 |
| AgsI | TTSAA | 3 cut(s) | 185, 206, 227 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 8, 40 |
| AluBI | AGCT | 2 cut(s) | 144, 233 |
| AluI | AGCT | 2 cut(s) | 144, 233 |
| Alw26I | GTCTC | 1 cut(s) | 71 |
| AspLEI | GCGC | 1 cut(s) | 130 |
| AsuC2I | CCSGG | 1 cut(s) | 55 |
| BccI | CCATC | 3 cut(s) | 82, 97, 187 |
| BcnI | CCSGG | 1 cut(s) | 55 |
| BcoDI | GTCTC | 1 cut(s) | 71 |
| BfmI | CTRYAG | 1 cut(s) | 96 |
| Bme1390I | CCNGG | 1 cut(s) | 55 |
| BmiI | GGNNCC | 1 cut(s) | 103 |
| BmrFI | CCNGG | 1 cut(s) | 55 |
| BpuMI | CCSGG | 1 cut(s) | 55 |
| Bsa29I | ATCGAT | 1 cut(s) | 151 |
| BsaAI | YACGTR | 1 cut(s) | 125 |
| BsaI | GGTCTC | 1 cut(s) | 71 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 8, 38 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 54 |
| BseCI | ATCGAT | 1 cut(s) | 151 |
| BseGI | GGATG | 1 cut(s) | 168 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 54 |
| Bsh1236I | CGCG | 1 cut(s) | 130 |
| BshVI | ATCGAT | 1 cut(s) | 151 |
| BsiSI | CCGG | 1 cut(s) | 55 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 54 |
| BsmAI | GTCTC | 1 cut(s) | 71 |
| Bso31I | GGTCTC | 1 cut(s) | 71 |
| Bsp143I | GATC | 3 cut(s) | 109, 138, 148 |
| BspDI | ATCGAT | 1 cut(s) | 151 |
| BspFNI | CGCG | 1 cut(s) | 130 |
| BspLI | GGNNCC | 1 cut(s) | 103 |
| BspTNI | GGTCTC | 1 cut(s) | 71 |
| BssMI | GATC | 3 cut(s) | 109, 138, 148 |
| BstBAI | YACGTR | 1 cut(s) | 125 |
| BstF5I | GGATG | 1 cut(s) | 168 |
| BstFNI | CGCG | 1 cut(s) | 130 |
| BstHHI | GCGC | 1 cut(s) | 130 |
| BstKTI | GATC | 3 cut(s) | 112, 141, 151 |
| BstMAI | GTCTC | 1 cut(s) | 71 |
| BstMBI | GATC | 3 cut(s) | 109, 138, 148 |
| BstSCI | CCNGG | 1 cut(s) | 53 |
| BstSFI | CTRYAG | 1 cut(s) | 96 |
| BstUI | CGCG | 1 cut(s) | 130 |
| Bsu15I | ATCGAT | 1 cut(s) | 151 |
| BsuTUI | ATCGAT | 1 cut(s) | 151 |
| BtsCI | GGATG | 1 cut(s) | 168 |
| BtsI | GCAGTG | 1 cut(s) | 77 |
| BtsIMutI | CAGTG | 1 cut(s) | 77 |
| CfoI | GCGC | 1 cut(s) | 130 |
| ClaI | ATCGAT | 1 cut(s) | 151 |
| CviAII | CATG | 1 cut(s) | 13 |
| CviJI | RGCY | 2 cut(s) | 144, 233 |
| CviKI_1 | RGCY | 2 cut(s) | 144, 233 |
| DpnI | GATC | 3 cut(s) | 111, 140, 150 |
| DpnII | GATC | 3 cut(s) | 109, 138, 148 |
| Eco31I | GGTCTC | 1 cut(s) | 71 |
| FaeI | CATG | 1 cut(s) | 16 |
| FaiI | YATR | 5 cut(s) | 14, 63, 98, 122, 147 |
| FatI | CATG | 1 cut(s) | 12 |
| FblI | GTMKAC | 1 cut(s) | 9 |
| FokI | GGATG | 1 cut(s) | 175 |
| GlaI | GCGC | 1 cut(s) | 129 |
| HapII | CCGG | 1 cut(s) | 55 |
| HhaI | GCGC | 1 cut(s) | 130 |
| Hin1II | CATG | 1 cut(s) | 16 |
| Hin6I | GCGC | 1 cut(s) | 128 |
| HinP1I | GCGC | 1 cut(s) | 128 |
| HincII | GTYRAC | 1 cut(s) | 10 |
| HindII | GTYRAC | 1 cut(s) | 10 |
| HpaII | CCGG | 1 cut(s) | 55 |
| Hpy166II | GTNNAC | 1 cut(s) | 10 |
| Hpy188I | TCNGA | 1 cut(s) | 71 |
| Hpy188III | TCNNGA | 3 cut(s) | 160, 203, 218 |
| Hpy8I | GTNNAC | 1 cut(s) | 10 |
| Hpy99I | CGWCG | 2 cut(s) | 172, 175 |
| HpyAV | CCTTC | 3 cut(s) | 39, 46, 53 |
| HpyCH4IV | ACGT | 1 cut(s) | 124 |
| HpySE526I | ACGT | 1 cut(s) | 124 |
| Hsp92II | CATG | 1 cut(s) | 16 |
| HspAI | GCGC | 1 cut(s) | 128 |
| Kzo9I | GATC | 3 cut(s) | 109, 138, 148 |
| LpnPI | CCDG | 3 cut(s) | 68, 145, 231 |
| MaeII | ACGT | 1 cut(s) | 124 |
| MaeIII | GTNAC | 1 cut(s) | 131 |
| MalI | GATC | 3 cut(s) | 111, 140, 150 |
| MboI | GATC | 3 cut(s) | 109, 138, 148 |
| MboII | GAAGA | 1 cut(s) | 197 |
| MmeI | TCCRAC | 1 cut(s) | 94 |
| MseI | TTAA | 1 cut(s) | 237 |
| MspI | CCGG | 1 cut(s) | 55 |
| MspR9I | CCNGG | 1 cut(s) | 55 |
| MvnI | CGCG | 1 cut(s) | 130 |
| NciI | CCSGG | 1 cut(s) | 55 |
| NdeII | GATC | 3 cut(s) | 109, 138, 148 |
| NlaIII | CATG | 1 cut(s) | 16 |
| NlaIV | GGNNCC | 1 cut(s) | 103 |
| Ppu21I | YACGTR | 1 cut(s) | 125 |
| PspN4I | GGNNCC | 1 cut(s) | 103 |
| SalI | GTCGAC | 1 cut(s) | 8 |
| SaqAI | TTAA | 1 cut(s) | 237 |
| Sau3AI | GATC | 3 cut(s) | 109, 138, 148 |
| ScrFI | CCNGG | 1 cut(s) | 55 |
| SetI | ASST | 3 cut(s) | 127, 146, 235 |
| SfcI | CTRYAG | 1 cut(s) | 96 |
| SspI | AATATT | 1 cut(s) | 254 |
| StyD4I | CCNGG | 1 cut(s) | 53 |
| TaiI | ACGT | 1 cut(s) | 127 |
| TaqI | TCGA | 4 cut(s) | 9, 137, 151, 173 |
| Tru1I | TTAA | 1 cut(s) | 237 |
| Tru9I | TTAA | 1 cut(s) | 237 |
| TscAI | CASTG | 1 cut(s) | 84 |
| TspDTI | ATGAA | 2 cut(s) | 17, 29 |
| TspRI | CASTG | 1 cut(s) | 84 |
| XmiI | GTMKAC | 1 cut(s) | 9 |