helicase activity
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0358351 RchiOBHm_Chr1g0375481 RchiOBHm_Chr3g0482501 RchiOBHm_Chr4g0390221 |
| rosa_roxburghii | Rroxscaffold_1G00020020 Rroxscaffold_1G00050680 Rroxscaffold_2G00094370 Rroxscaffold_2G00146170 Rroxscaffold_3G00221700 |
| rosa_rugosa | Rorug07G0192600 |
| rosa_samantha | Rh1AG168300 Rh1AG275000 Rh1AG401900 Rh2BG094900 Rh2CG096700 Rh2CG359400 Rh2DG203700 Rh2DG226600 Rh2DG560000 Rh3AG248100 Rh4AG347000 Rh4BG103700 Rh6BG341800 Rh6DG087800 Rh7BG302200 Rh7BG324800 Rh7CG214600 |
| rosa_wichuraiana | Rw1G035680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 264 |
| AciI | CCGC | 1 cut(s) | 172 |
| AcsI | RAATTY | 2 cut(s) | 126, 154 |
| AfaI | GTAC | 1 cut(s) | 214 |
| AflIII | ACRYGT | 1 cut(s) | 215 |
| AgsI | TTSAA | 5 cut(s) | 23, 44, 65, 77, 100 |
| AluBI | AGCT | 3 cut(s) | 71, 107, 168 |
| AluI | AGCT | 3 cut(s) | 71, 107, 168 |
| AoxI | GGCC | 1 cut(s) | 257 |
| ApeKI | GCWGC | 1 cut(s) | 282 |
| ApoI | RAATTY | 2 cut(s) | 126, 154 |
| BbvI | GCAGC | 1 cut(s) | 294 |
| BccI | CCATC | 2 cut(s) | 25, 193 |
| BfaI | CTAG | 2 cut(s) | 108, 249 |
| BisI | GCNGC | 1 cut(s) | 283 |
| BlsI | GCNGC | 1 cut(s) | 284 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 114, 146 |
| Bsa29I | ATCGAT | 1 cut(s) | 11 |
| BseCI | ATCGAT | 1 cut(s) | 11 |
| BseXI | GCAGC | 1 cut(s) | 294 |
| BshFI | GGCC | 1 cut(s) | 259 |
| BshVI | ATCGAT | 1 cut(s) | 11 |
| BsiSI | CCGG | 1 cut(s) | 245 |
| BsnI | GGCC | 1 cut(s) | 259 |
| BspACI | CCGC | 1 cut(s) | 172 |
| BspANI | GGCC | 1 cut(s) | 259 |
| BspDI | ATCGAT | 1 cut(s) | 11 |
| Bst4CI | ACNGT | 1 cut(s) | 48 |
| BstC8I | GCNNGC | 1 cut(s) | 90 |
| BstNSI | RCATGY | 1 cut(s) | 219 |
| BstV1I | GCAGC | 1 cut(s) | 294 |
| Bsu15I | ATCGAT | 1 cut(s) | 11 |
| BsuRI | GGCC | 1 cut(s) | 259 |
| BsuTUI | ATCGAT | 1 cut(s) | 11 |
| Cac8I | GCNNGC | 1 cut(s) | 90 |
| ClaI | ATCGAT | 1 cut(s) | 11 |
| Csp6I | GTAC | 1 cut(s) | 213 |
| CviAII | CATG | 1 cut(s) | 216 |
| CviJI | RGCY | 8 cut(s) | 71, 88, 107, 168, 179, 226, 248, 259 |
| CviKI_1 | RGCY | 8 cut(s) | 71, 88, 107, 168, 179, 226, 248, 259 |
| CviQI | GTAC | 1 cut(s) | 213 |
| EcoRI | GAATTC | 1 cut(s) | 154 |
| FaeI | CATG | 1 cut(s) | 219 |
| FaiI | YATR | 5 cut(s) | 205, 207, 217, 241, 287 |
| FatI | CATG | 1 cut(s) | 215 |
| FblI | GTMKAC | 1 cut(s) | 264 |
| Fnu4HI | GCNGC | 1 cut(s) | 283 |
| Fsp4HI | GCNGC | 1 cut(s) | 283 |
| FspBI | CTAG | 2 cut(s) | 108, 249 |
| GluI | GCNGC | 1 cut(s) | 283 |
| HaeIII | GGCC | 1 cut(s) | 259 |
| HapII | CCGG | 1 cut(s) | 245 |
| Hin1II | CATG | 1 cut(s) | 219 |
| HincII | GTYRAC | 1 cut(s) | 193 |
| HindII | GTYRAC | 1 cut(s) | 193 |
| HinfI | GANTC | 1 cut(s) | 253 |
| HpaII | CCGG | 1 cut(s) | 245 |
| Hpy166II | GTNNAC | 2 cut(s) | 193, 265 |
| Hpy188III | TCNNGA | 2 cut(s) | 41, 56 |
| Hpy8I | GTNNAC | 2 cut(s) | 193, 265 |
| HpyCH4III | ACNGT | 1 cut(s) | 48 |
| HpyCH4V | TGCA | 1 cut(s) | 92 |
| Hsp92II | CATG | 1 cut(s) | 219 |
| LpnPI | CCDG | 5 cut(s) | 69, 102, 209, 258, 273 |
| Lsp1109I | GCAGC | 1 cut(s) | 294 |
| MaeI | CTAG | 2 cut(s) | 108, 249 |
| MaeIII | GTNAC | 1 cut(s) | 293 |
| MboII | GAAGA | 1 cut(s) | 35 |
| MluCI | AATT | 2 cut(s) | 126, 154 |
| MnlI | CCTC | 1 cut(s) | 104 |
| MspI | CCGG | 1 cut(s) | 245 |
| NlaIII | CATG | 1 cut(s) | 219 |
| NmuCI | GTSAC | 1 cut(s) | 293 |
| NspI | RCATGY | 1 cut(s) | 219 |
| PciI | ACATGT | 1 cut(s) | 215 |
| PfeI | GAWTC | 1 cut(s) | 253 |
| PkrI | GCNGC | 1 cut(s) | 284 |
| PscI | ACATGT | 1 cut(s) | 215 |
| RsaI | GTAC | 1 cut(s) | 214 |
| RsaNI | GTAC | 1 cut(s) | 213 |
| SatI | GCNGC | 1 cut(s) | 283 |
| SetI | ASST | 4 cut(s) | 73, 109, 170, 198 |
| Sse9I | AATT | 2 cut(s) | 126, 154 |
| SsiI | CCGC | 1 cut(s) | 172 |
| SspI | AATATT | 1 cut(s) | 96 |
| SspMI | CTAG | 2 cut(s) | 108, 249 |
| TaaI | ACNGT | 1 cut(s) | 48 |
| TaqI | TCGA | 1 cut(s) | 11 |
| TasI | AATT | 2 cut(s) | 126, 154 |
| TfiI | GAWTC | 1 cut(s) | 253 |
| TseFI | GTSAC | 1 cut(s) | 293 |
| TseI | GCWGC | 1 cut(s) | 282 |
| Tsp45I | GTSAC | 1 cut(s) | 293 |
| XapI | RAATTY | 2 cut(s) | 126, 154 |
| XceI | RCATGY | 1 cut(s) | 219 |
| XmiI | GTMKAC | 1 cut(s) | 264 |
| XspI | CTAG | 2 cut(s) | 108, 249 |