Rh1AG401900

7-dehydrocholesterol reductase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Forward (+)
62864581 .. 62867699
3119 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG401900.1

Sequence Viewer

Length: 432 bp
ATGTCGTCGTCGATTGGACTTGAAGAAGTGATGGGTTTTCTTGAACAGTCGTTTCCTGATGTTGAAATAGCTATTGAACTTGGGAAGATGTGTCTTTTTGCAGCAATATTGAAAGAAGCTAGAGGAAACAATGGAGAAATTCTCACAAGGAATAACAATGTTGAGAATTCTATTGATAGCTACCGCGAAGCCTTTGACGTTGTTGACCTGATAGTATATAATGGTACATGCTGTTGGCTCTCTTTTCCAATATATCCGGCTGGGAATCGGCCTGCCTACAAGGCAAATGGTATGGCAGCATACTTTGTCACATTGACAGATTACTTGCTTGACAGTTTCTTCTGGAGATCAGACATGTATAATTACATAACCATTTCCTTAAGCTTGTGTGTTCAGAATTTTAATTGTTCCACAACAAAAATATTTAGCTGA

Protein Analysis

143

Amino Acids

16.13

Weight (kDa)

4.4

Isoelectric Point (pI)

40.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 186
AciI CCGC 1 cut(s) 184
AcsI RAATTY 3 cut(s) 138, 166, 397
AfaI GTAC 1 cut(s) 226
AflII CTTAAG 1 cut(s) 379
AflIII ACRYGT 1 cut(s) 354
AgsI TTSAA 5 cut(s) 23, 44, 65, 77, 112
AluBI AGCT 5 cut(s) 71, 119, 180, 384, 429
AluI AGCT 5 cut(s) 71, 119, 180, 384, 429
AoxI GGCC 1 cut(s) 269
ApeKI GCWGC 2 cut(s) 101, 296
ApoI RAATTY 3 cut(s) 138, 166, 397
BbvI GCAGC 2 cut(s) 113, 308
BccI CCATC 1 cut(s) 25
BfaI CTAG 1 cut(s) 120
BfrI CTTAAG 1 cut(s) 379
BglI GCCNNNNNGGC 1 cut(s) 281
BisI GCNGC 2 cut(s) 102, 297
BlsI GCNGC 2 cut(s) 103, 298
BplI GAGNNNNNCTC 2 cut(s) 126, 158
BpmI CTGGAG 1 cut(s) 364
BseXI GCAGC 2 cut(s) 113, 308
BseYI CCCAGC 1 cut(s) 260
Bsh1236I CGCG 1 cut(s) 186
BshFI GGCC 1 cut(s) 271
BsiSI CCGG 1 cut(s) 257
BsnI GGCC 1 cut(s) 271
Bsp143I GATC 1 cut(s) 347
BspACI CCGC 1 cut(s) 184
BspANI GGCC 1 cut(s) 271
BspFNI CGCG 1 cut(s) 186
BspTI CTTAAG 1 cut(s) 379
BssMI GATC 1 cut(s) 347
Bst4CI ACNGT 2 cut(s) 48, 335
BstAFI CTTAAG 1 cut(s) 379
BstC8I GCNNGC 1 cut(s) 273
BstFNI CGCG 1 cut(s) 186
BstKTI GATC 1 cut(s) 350
BstMBI GATC 1 cut(s) 347
BstMWI GCNNNNNNNGC 1 cut(s) 281
BstNSI RCATGY 2 cut(s) 231, 358
BstUI CGCG 1 cut(s) 186
BstV1I GCAGC 2 cut(s) 113, 308
BsuRI GGCC 1 cut(s) 271
Cac8I GCNNGC 1 cut(s) 273
Csp6I GTAC 1 cut(s) 225
CviAII CATG 2 cut(s) 228, 355
CviJI RGCY 9 cut(s) 71, 119, 180, 191, 238, 260, 271, 384, 429
CviKI_1 RGCY 9 cut(s) 71, 119, 180, 191, 238, 260, 271, 384, 429
CviQI GTAC 1 cut(s) 225
DpnI GATC 1 cut(s) 349
DpnII GATC 1 cut(s) 347
EcoRI GAATTC 1 cut(s) 166
FaeI CATG 2 cut(s) 231, 358
FaiI YATR 9 cut(s) 217, 219, 229, 253, 293, 301, 356, 360, 368
FatI CATG 2 cut(s) 227, 354
Fnu4HI GCNGC 2 cut(s) 102, 297
Fsp4HI GCNGC 2 cut(s) 102, 297
FspBI CTAG 1 cut(s) 120
GluI GCNGC 2 cut(s) 102, 297
GsaI CCCAGC 1 cut(s) 264
GsuI CTGGAG 1 cut(s) 364
HaeIII GGCC 1 cut(s) 271
HapII CCGG 1 cut(s) 257
Hin1II CATG 2 cut(s) 231, 358
HincII GTYRAC 1 cut(s) 205
HindII GTYRAC 1 cut(s) 205
HindIII AAGCTT 1 cut(s) 382
HinfI GANTC 1 cut(s) 265
HpaII CCGG 1 cut(s) 257
Hpy166II GTNNAC 1 cut(s) 205
Hpy188I TCNGA 2 cut(s) 352, 396
Hpy188III TCNNGA 3 cut(s) 41, 56, 343
Hpy8I GTNNAC 1 cut(s) 205
Hpy99I CGWCG 2 cut(s) 10, 13
HpyCH4III ACNGT 2 cut(s) 48, 335
HpyCH4IV ACGT 1 cut(s) 198
HpyCH4V TGCA 1 cut(s) 101
HpyF10VI GCNNNNNNNGC 1 cut(s) 281
HpySE526I ACGT 1 cut(s) 198
Hsp92II CATG 2 cut(s) 231, 358
Kzo9I GATC 1 cut(s) 347
LpnPI CCDG 6 cut(s) 69, 221, 246, 270, 285, 328
Lsp1109I GCAGC 2 cut(s) 113, 308
MaeI CTAG 1 cut(s) 120
MaeII ACGT 1 cut(s) 198
MaeIII GTNAC 1 cut(s) 307
MalI GATC 1 cut(s) 349
MboI GATC 1 cut(s) 347
MboII GAAGA 3 cut(s) 35, 97, 331
MluCI AATT 5 cut(s) 138, 166, 361, 397, 403
MnlI CCTC 1 cut(s) 116
MseI TTAA 2 cut(s) 380, 402
MspCI CTTAAG 1 cut(s) 379
MspI CCGG 1 cut(s) 257
MvnI CGCG 1 cut(s) 186
MwoI GCNNNNNNNGC 1 cut(s) 281
NdeII GATC 1 cut(s) 347
NlaIII CATG 2 cut(s) 231, 358
NmuCI GTSAC 1 cut(s) 307
NspI RCATGY 2 cut(s) 231, 358
PciI ACATGT 1 cut(s) 354
PfeI GAWTC 1 cut(s) 265
PkrI GCNGC 2 cut(s) 103, 298
PscI ACATGT 1 cut(s) 354
PspFI CCCAGC 1 cut(s) 260
RsaI GTAC 1 cut(s) 226
RsaNI GTAC 1 cut(s) 225
SaqAI TTAA 2 cut(s) 380, 402
SatI GCNGC 2 cut(s) 102, 297
Sau3AI GATC 1 cut(s) 347
SetI ASST 7 cut(s) 73, 121, 182, 201, 210, 386, 431
SmlI CTYRAG 1 cut(s) 379
SmoI CTYRAG 1 cut(s) 379
Sse9I AATT 5 cut(s) 138, 166, 361, 397, 403
SsiI CCGC 1 cut(s) 184
SspI AATATT 2 cut(s) 108, 423
SspMI CTAG 1 cut(s) 120
TaaI ACNGT 2 cut(s) 48, 335
TaiI ACGT 1 cut(s) 201
TaqI TCGA 1 cut(s) 11
TasI AATT 5 cut(s) 138, 166, 361, 397, 403
TfiI GAWTC 1 cut(s) 265
Tru1I TTAA 2 cut(s) 380, 402
Tru9I TTAA 2 cut(s) 380, 402
TseFI GTSAC 1 cut(s) 307
TseI GCWGC 2 cut(s) 101, 296
Tsp45I GTSAC 1 cut(s) 307
Vha464I CTTAAG 1 cut(s) 379
XapI RAATTY 3 cut(s) 138, 166, 397
XceI RCATGY 2 cut(s) 231, 358
XspI CTAG 1 cut(s) 120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.