RchiOBHm_Chr2g0090671

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
4424237 .. 4424768
532 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46591

Sequence Viewer

Length: 192 bp
ATGAAGTTGAAGAAAGATAAGAAGAGGATTTTTGATCCTCCAGCGAGCTCTCGCTCTGCGAAGCTCCAATATGATCCTCTCTCTTACTCTCAGAATTTTGATCAAGGATGTTCTTGGGACCAACCTGATGAAGATGACCTTTGTTCGCGCTCGTTCTCCATGCGTTTTGCAGTTCCGTCCAACAACTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

63

Amino Acids

7.33

Weight (kDa)

7.75

Isoelectric Point (pI)

58.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 148
AclWI GGATC 2 cut(s) 29, 68
AcsI RAATTY 1 cut(s) 94
AgsI TTSAA 1 cut(s) 10
AluBI AGCT 2 cut(s) 48, 64
AluI AGCT 2 cut(s) 48, 64
Alw21I GWGCWC 1 cut(s) 50
AlwI GGATC 2 cut(s) 29, 68
ApoI RAATTY 1 cut(s) 94
AspLEI GCGC 1 cut(s) 150
AspS9I GGNCC 1 cut(s) 118
AvaII GGWCC 1 cut(s) 118
BanII GRGCYC 1 cut(s) 50
Bbv12I GWGCWC 1 cut(s) 50
BclI TGATCA 1 cut(s) 100
Bme18I GGWCC 1 cut(s) 118
BmgT120I GGNCC 1 cut(s) 118
BmiI GGNNCC 1 cut(s) 119
BpmI CTGGAG 1 cut(s) 24
BseGI GGATG 1 cut(s) 113
BseMII CTCAG 1 cut(s) 104
Bsh1236I CGCG 1 cut(s) 148
BsiHKAI GWGCWC 1 cut(s) 50
BslFI GGGAC 1 cut(s) 131
BsmFI GGGAC 1 cut(s) 131
Bsp1286I GDGCHC 1 cut(s) 50
Bsp143I GATC 3 cut(s) 34, 73, 100
BspCNI CTCAG 1 cut(s) 103
BspFNI CGCG 1 cut(s) 148
BspLI GGNNCC 1 cut(s) 119
BspPI GGATC 2 cut(s) 29, 68
BssMI GATC 3 cut(s) 34, 73, 100
Bst6I CTCTTC 1 cut(s) 17
BstC8I GCNNGC 1 cut(s) 46
BstDEI CTNAG 1 cut(s) 90
BstF5I GGATG 1 cut(s) 113
BstFNI CGCG 1 cut(s) 148
BstHHI GCGC 1 cut(s) 150
BstKTI GATC 3 cut(s) 37, 76, 103
BstMBI GATC 3 cut(s) 34, 73, 100
BstUI CGCG 1 cut(s) 148
BtsCI GGATG 1 cut(s) 113
Cac8I GCNNGC 1 cut(s) 46
CfoI GCGC 1 cut(s) 150
Cfr13I GGNCC 1 cut(s) 118
CviAII CATG 1 cut(s) 160
CviJI RGCY 2 cut(s) 48, 64
CviKI_1 RGCY 2 cut(s) 48, 64
DdeI CTNAG 1 cut(s) 90
DpnI GATC 3 cut(s) 36, 75, 102
DpnII GATC 3 cut(s) 34, 73, 100
Eam1104I CTCTTC 1 cut(s) 17
EarI CTCTTC 1 cut(s) 17
Ecl136II GAGCTC 1 cut(s) 48
Eco24I GRGCYC 1 cut(s) 50
Eco47I GGWCC 1 cut(s) 118
Eco53kI GAGCTC 1 cut(s) 48
EcoICRI GAGCTC 1 cut(s) 48
EcoT38I GRGCYC 1 cut(s) 50
FaeI CATG 1 cut(s) 163
FaiI YATR 2 cut(s) 72, 161
FalI AAGNNNNNCTT 2 cut(s) 123, 155
FaqI GGGAC 1 cut(s) 131
FatI CATG 1 cut(s) 159
FbaI TGATCA 1 cut(s) 100
FokI GGATG 1 cut(s) 120
FriOI GRGCYC 1 cut(s) 50
GlaI GCGC 1 cut(s) 149
GsuI CTGGAG 1 cut(s) 24
HhaI GCGC 1 cut(s) 150
Hin1II CATG 1 cut(s) 163
Hin6I GCGC 1 cut(s) 148
HinP1I GCGC 1 cut(s) 148
Hpy188I TCNGA 1 cut(s) 93
HpyCH4V TGCA 1 cut(s) 170
HpyF3I CTNAG 1 cut(s) 90
Hsp92II CATG 1 cut(s) 163
HspAI GCGC 1 cut(s) 148
Ksp22I TGATCA 1 cut(s) 100
Kzo9I GATC 3 cut(s) 34, 73, 100
LmnI GCTCC 1 cut(s) 69
LpnPI CCDG 2 cut(s) 54, 138
MalI GATC 3 cut(s) 36, 75, 102
MboI GATC 3 cut(s) 34, 73, 100
MboII GAAGA 3 cut(s) 22, 34, 143
MhlI GDGCHC 1 cut(s) 50
MluCI AATT 1 cut(s) 94
MnlI CCTC 3 cut(s) 18, 48, 87
MvnI CGCG 1 cut(s) 148
NdeII GATC 3 cut(s) 34, 73, 100
NlaIII CATG 1 cut(s) 163
NlaIV GGNNCC 1 cut(s) 119
Psp124BI GAGCTC 1 cut(s) 50
PspN4I GGNNCC 1 cut(s) 119
PspPI GGNCC 1 cut(s) 118
SacI GAGCTC 1 cut(s) 50
Sau3AI GATC 3 cut(s) 34, 73, 100
Sau96I GGNCC 1 cut(s) 118
SduI GDGCHC 1 cut(s) 50
SetI ASST 4 cut(s) 50, 66, 127, 141
SgeI CNNG 9 cut(s) 53, 57, 63, 116, 126, 137, 159, 163, 172
SinI GGWCC 1 cut(s) 118
Sse9I AATT 1 cut(s) 94
SstI GAGCTC 1 cut(s) 50
TasI AATT 1 cut(s) 94
TspDTI ATGAA 2 cut(s) 17, 144
TspGWI ACGGA 1 cut(s) 165
VpaK11BI GGWCC 1 cut(s) 118
XapI RAATTY 1 cut(s) 94
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.