No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11890 |
| fragaria_vesca | FvH4_6g35230 |
| malus_domestica | MD09G1177400.v1.1 MD17G1149000.v1.1 |
| prunus_persica | Prupe.3G036800_v2.0.a1 Prupe.3G036800_v2.0.a1 Prupe.3G036800_v2.0.a1 |
| pyrus_communis | pycom09g09560 pycom17g14280 |
| rosa_chinensis | RchiOBHm_Chr2g0091761 RchiOBHm_Chr2g0146571 |
| rosa_laevigata | RLG00000020208 |
| rosa_multiflora | Rmu_sc0001986.1_g000029 |
| rosa_roxburghii | Rroxscaffold_1G00025120 Rroxscaffold_2G00091680 Rroxscaffold_2G00100030 |
| rosa_rugosa | Rorug02G0107300 Rorug02G0107300 Rorug02G0107400 Rorug02G0107500 Rorug02G0394800 Rorug02G0394800 Rorug02G0394900 Rorug02G0395000 |
| rosa_samantha | Rh2AG451700 Rh2BG464500 Rh2CG438600 Rh2DG473500 Rh6AG134600 |
| rosa_wichuraiana | Rw2G036900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcyI | GRCGYC | 1 cut(s) | 50 |
| AgsI | TTSAA | 1 cut(s) | 124 |
| AluBI | AGCT | 2 cut(s) | 113, 162 |
| AluI | AGCT | 2 cut(s) | 113, 162 |
| Alw21I | GWGCWC | 1 cut(s) | 16 |
| ApeKI | GCWGC | 1 cut(s) | 113 |
| AsuHPI | GGTGA | 1 cut(s) | 70 |
| Bbv12I | GWGCWC | 1 cut(s) | 16 |
| BbvI | GCAGC | 1 cut(s) | 100 |
| BclI | TGATCA | 1 cut(s) | 60 |
| BfmI | CTRYAG | 1 cut(s) | 148 |
| BisI | GCNGC | 1 cut(s) | 114 |
| BlsI | GCNGC | 1 cut(s) | 115 |
| BsaBI | GATNNNNATC | 1 cut(s) | 81 |
| BsaHI | GRCGYC | 1 cut(s) | 50 |
| BsaJI | CCNNGG | 1 cut(s) | 53 |
| Bse1I | ACTGG | 1 cut(s) | 50 |
| Bse8I | GATNNNNATC | 1 cut(s) | 81 |
| BseDI | CCNNGG | 1 cut(s) | 53 |
| BseJI | GATNNNNATC | 1 cut(s) | 81 |
| BseNI | ACTGG | 1 cut(s) | 50 |
| BseXI | GCAGC | 1 cut(s) | 100 |
| BseYI | CCCAGC | 1 cut(s) | 19 |
| BsiHKAI | GWGCWC | 1 cut(s) | 16 |
| Bsp1286I | GDGCHC | 1 cut(s) | 16 |
| Bsp143I | GATC | 1 cut(s) | 60 |
| Bsp19I | CCATGG | 1 cut(s) | 53 |
| BspMAI | CTGCAG | 1 cut(s) | 152 |
| BsrI | ACTGG | 1 cut(s) | 50 |
| BssECI | CCNNGG | 1 cut(s) | 53 |
| BssMI | GATC | 1 cut(s) | 60 |
| BssNI | GRCGYC | 1 cut(s) | 50 |
| BssT1I | CCWWGG | 1 cut(s) | 53 |
| BstACI | GRCGYC | 1 cut(s) | 50 |
| BstDEI | CTNAG | 1 cut(s) | 8 |
| BstDSI | CCRYGG | 1 cut(s) | 53 |
| BstKTI | GATC | 1 cut(s) | 63 |
| BstMBI | GATC | 1 cut(s) | 60 |
| BstSFI | CTRYAG | 1 cut(s) | 148 |
| BstV1I | GCAGC | 1 cut(s) | 100 |
| BtgI | CCRYGG | 1 cut(s) | 53 |
| CseI | GACGC | 1 cut(s) | 58 |
| CviAII | CATG | 1 cut(s) | 54 |
| CviJI | RGCY | 4 cut(s) | 19, 70, 113, 162 |
| CviKI_1 | RGCY | 4 cut(s) | 19, 70, 113, 162 |
| DdeI | CTNAG | 1 cut(s) | 8 |
| DpnI | GATC | 1 cut(s) | 62 |
| DpnII | GATC | 1 cut(s) | 60 |
| Eco130I | CCWWGG | 1 cut(s) | 53 |
| EcoT14I | CCWWGG | 1 cut(s) | 53 |
| ErhI | CCWWGG | 1 cut(s) | 53 |
| FaeI | CATG | 1 cut(s) | 57 |
| FaiI | YATR | 2 cut(s) | 55, 166 |
| FatI | CATG | 1 cut(s) | 53 |
| FbaI | TGATCA | 1 cut(s) | 60 |
| Fnu4HI | GCNGC | 1 cut(s) | 114 |
| Fsp4HI | GCNGC | 1 cut(s) | 114 |
| GluI | GCNGC | 1 cut(s) | 114 |
| GsaI | CCCAGC | 1 cut(s) | 23 |
| HgaI | GACGC | 1 cut(s) | 58 |
| Hin1I | GRCGYC | 1 cut(s) | 50 |
| Hin1II | CATG | 1 cut(s) | 57 |
| HindIII | AAGCTT | 1 cut(s) | 160 |
| HphI | GGTGA | 1 cut(s) | 70 |
| Hpy188I | TCNGA | 1 cut(s) | 9 |
| Hpy188III | TCNNGA | 1 cut(s) | 74 |
| HpyCH4V | TGCA | 2 cut(s) | 116, 150 |
| HpyF3I | CTNAG | 1 cut(s) | 8 |
| Hsp92I | GRCGYC | 1 cut(s) | 50 |
| Hsp92II | CATG | 1 cut(s) | 57 |
| Ksp22I | TGATCA | 1 cut(s) | 60 |
| Kzo9I | GATC | 1 cut(s) | 60 |
| LpnPI | CCDG | 3 cut(s) | 5, 31, 87 |
| Lsp1109I | GCAGC | 1 cut(s) | 100 |
| MalI | GATC | 1 cut(s) | 62 |
| MboI | GATC | 1 cut(s) | 60 |
| MboII | GAAGA | 1 cut(s) | 133 |
| MhlI | GDGCHC | 1 cut(s) | 16 |
| MluCI | AATT | 2 cut(s) | 124, 136 |
| MseI | TTAA | 1 cut(s) | 155 |
| NcoI | CCATGG | 1 cut(s) | 53 |
| NdeII | GATC | 1 cut(s) | 60 |
| NlaIII | CATG | 1 cut(s) | 57 |
| PkrI | GCNGC | 1 cut(s) | 115 |
| PspFI | CCCAGC | 1 cut(s) | 19 |
| PstI | CTGCAG | 1 cut(s) | 152 |
| SaqAI | TTAA | 1 cut(s) | 155 |
| SatI | GCNGC | 1 cut(s) | 114 |
| Sau3AI | GATC | 1 cut(s) | 60 |
| SduI | GDGCHC | 1 cut(s) | 16 |
| SetI | ASST | 2 cut(s) | 115, 164 |
| SfcI | CTRYAG | 1 cut(s) | 148 |
| SgeI | CNNG | 7 cut(s) | 27, 32, 58, 66, 86, 98, 142 |
| Sse9I | AATT | 2 cut(s) | 124, 136 |
| StyI | CCWWGG | 1 cut(s) | 53 |
| TasI | AATT | 2 cut(s) | 124, 136 |
| Tru1I | TTAA | 1 cut(s) | 155 |
| Tru9I | TTAA | 1 cut(s) | 155 |
| TseI | GCWGC | 1 cut(s) | 113 |
| TspDTI | ATGAA | 1 cut(s) | 133 |