Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0004936

Physical Location & Seq

Genomic Coordinates Forward (+)

9155221 .. 9158572

Gene Structure 3352 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0107300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGAGAGGAGCTGTGCATGTAGCAGTTGCTGCAGCAATTGGTAACATGTTGCAAGGATGGGATAACTCAGTCATTGCAGGGTCTGTTCTTTATATAAAAAAGGAATTCAATTTAGAAAGTGAACCGACATTTGAAGGGCTTATTGTAGCAACATCACTCATTGGAGCCACATTGATCACAACATTTTCTGGGCCAGCATCGGATTGGCTGGGGCGGCGAACAATGCTCATAATGTCATCACTGTTTTTCTTTGTTAGTGGTCTGGTAATGTTGTGGTCTCCAAATGTTTATGTCTTGCTTTTGGCTAGGTTGTTAGATGGTTTTGGAACCGGTTTGGCTGTTACTCTTGTTCCTGCGTATATATCTGAGATAGCGCCACCGGATATTAGAGGAAGACTGAATACACTTCCACAGTTCACTGGTTCTGGTGGGATGTTCTTGTCTTATTGTATGGTGTTTGGAATGTCATTGATGGATACACCAAAGTGGAGATTGATGCTCGGGGTTTTGTCCATTCCATCATTAGCTTATTTCGCTTTGACAATACTTTACCTGCCTGAATCTCCTCGGTGGCTTGTGAGTAAGGGACGAATCCTCGAGGCAAAACAAGTGCTGCAAAGACTTAATGGCAGGGAAAATGTTTCAGGTGAGTTGGCTTTGCTAGTTGAAGGTCTAAACACTGGCAAAGATACATCATTGGAAGAGTACATTATTAGTCCAGCCAATGTGCTTAACCAGGCAACAACTGAAGAGAAGTACCAAATAAGGTTATATGGGGATGAAGAGGGAGTATCATATATTGCTAAACCAGTAACTGGACAGAGTTTGACATCTCGCCATGGGAGTGCTACAAACCAAAGTAGCATCTCTCTTAAGGATCCTCTTGTGACGCTCTTTAGTAGTGTCCATGAGAAGCTCTCTGAGAGAGGAGGAAGCAAGGGCAGCAGCATGCTTCCATTTCTAGGCAGTGTTCTGGTTAATGCTGGGGAGCATCACAGTAAGCATTGGGACATGGAGAGCCAAAGCGACGATGAGGACCATGAATCAGAAACATCCGGGGCTTATGGTGATGACAGTTTGAGAAGTCCATTGATCTCGCGTCAGACAACAAGTGTGGACAAGGACATTGCCACTCCTAAATCCGGTGGAAGTGTTTTAGGTGTAAGAGGCAATACCATTCTTAATGCTGTTGAGGCAGGTAGTACTAGTAGTATAGATATTGGTGGTGGTTGGCAGCTTGCTTATAAATATGCTGAGCGAGTAAGCGAAGATGGGAAGAAGGAAGGAGTTCAAAGAGTCTATTTGCACCAGGAGAGTGCACTTGGGTCTCAACCTGCATCGGTTGTTTCCATTTCTGGTGTAAGGCAAGAAAATGGAGCAATTCAGGCTGCTGCTTTGGTTAGTCCCCCGATGGTTCTTCCACCAGAAGCTGTTGTTAAAGGTTCAAAATGGAGAGAGCTTTTGGAACCAGGAGTCAAGCGCGCATTGGTTGTCGGGATAGGACTTCAAGTTCTTGAGCAGATTGCTGGCATAAATGGGGTTCTCTACTACACTCCTCAGATTTATGAGCGAACAGGCATAACAGTTCTTCTGTCTAACATAGGACTGAATTCGGCTTCTGCATCTCTCTTCTTAAGTGCCATCACAACATTCTTAATGCTTCCTTGCATAGCTACTTCCATGTGGCTTATGGATATAGCTGGCAGGAGGTCATTGCTGCTATCCACATTACCAATACTGATAGTGGCGCTTGCTTTACTAGTGTTTGGCAGCATTGTCAACTTAGGCACTATTTGGACTGCAACAATATCCACTGCTAGTGTATCGGTCTACCTCTGCTGCTTCGTCATGGGCTTCGGGGTAATCCCAAATATTCTTTGTGCAGAGATCTTCCCTACTCGCGTCCGTGGCCTCTGCATTGCCATTTGTGCTCTCACTTATTGGATTGGAGACATCATCATCACTTACTCATTCCCTGTCATGCTCTCCTCCATTGGTTTTGCTGGTGTCTTTGGAATCTACGTTGTCGGATGCATCATCTCCTGGATATTTGTTTACTTGAAAGTGCCCGAAACCAAGGGCATGCCTCTAGAAGTGATTTCTGAGTTCTTTGCTGCTGGAGTAAAACCAGCTTCAGATAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04130 ko04145 ko05134 map04130 map04145 map05134

Pfam Domains

Protein Families

Longin Synaptobrevin

Protein Analysis

714

Amino Acids

76.69

Weight (kDa)

5.57

Isoelectric Point (pI)

37.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	7 - 235	3.3e-52	Sugar (and other) transporter
MFS_1	PF07690	12 - 194	6.7e-22	Major Facilitator Superfamily
Sugar_tr	PF00083	482 - 704	2.4e-36	Sugar (and other) transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004936)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11890
fragaria_vesca	FvH4_6g35230
malus_domestica	MD09G1177400.v1.1 MD17G1149000.v1.1
prunus_persica	Prupe.3G036800_v2.0.a1 Prupe.3G036800_v2.0.a1 Prupe.3G036800_v2.0.a1
pyrus_communis	pycom09g09560 pycom17g14280
rosa_chinensis	RchiOBHm_Chr2g0091761 RchiOBHm_Chr2g0146571
rosa_laevigata	RLG00000020208
rosa_multiflora	Rmu_sc0001986.1_g000029
rosa_roxburghii	Rroxscaffold_1G00025120 Rroxscaffold_2G00091680 Rroxscaffold_2G00100030
rosa_rugosa	Rorug02G0107300 Rorug02G0107300 Rorug02G0107400 Rorug02G0107500 Rorug02G0394800 Rorug02G0394800 Rorug02G0394900 Rorug02G0395000
rosa_samantha	Rh2AG451700 Rh2BG464500 Rh2CG438600 Rh2DG473500 Rh6AG134600
rosa_wichuraiana	Rw2G036900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1245
AbsI	CCTCGAGG	1 cut(s)	596
Acc36I	ACCTGC	3 cut(s)	561, 1187, 1342
AccB7I	CCANNNNNTGG	1 cut(s)	815
AccI	GTMKAC	1 cut(s)	1830
AccII	CGCG	3 cut(s)	1099, 1482, 1902
AciI	CCGC	1 cut(s)	214
AclWI	GGATC	2 cut(s)	872, 885
AcsI	RAATTY	2 cut(s)	104, 1609
AcuI	CTGAAG	2 cut(s)	768, 2118
AfaI	GTAC	3 cut(s)	707, 758, 1204
AfiI	CCNNNNNNNGG	3 cut(s)	815, 962, 1142
AflII	CTTAAG	2 cut(s)	872, 1633
AflIII	ACRYGT	1 cut(s)	45
AgeI	ACCGGT	1 cut(s)	329
AgsI	TTSAA	7 cut(s)	109, 134, 668, 1292, 1446, 1508, 2062
AhlI	ACTAGT	2 cut(s)	1205, 1759
AjnI	CCWGG	4 cut(s)	735, 1308, 1468, 2042
AleI	CACNNNNGTG	1 cut(s)	484
AloI	GAACNNNNNNTCC	2 cut(s)	1494, 1526
AluBI	AGCT	9 cut(s)	11, 527, 916, 1237, 1430, 1459, 1673, 1700, 2132
AluI	AGCT	9 cut(s)	11, 527, 916, 1237, 1430, 1459, 1673, 1700, 2132
Alw21I	GWGCWC	2 cut(s)	1321, 1933
Alw26I	GTCTC	3 cut(s)	282, 1332, 1944
Alw44I	GTGCAC	1 cut(s)	1317
AlwI	GGATC	2 cut(s)	872, 885
AlwNI	CAGNNNCTG	4 cut(s)	29, 83, 815, 1430
Ama87I	CYCGRG	2 cut(s)	500, 596
AoxI	GGCC	2 cut(s)	191, 1909
ApaLI	GTGCAC	1 cut(s)	1317
ApoI	RAATTY	2 cut(s)	104, 1609
AsiGI	ACCGGT	1 cut(s)	329
Asp700I	GAANNNNTTC	1 cut(s)	1287
AspLEI	GCGC	4 cut(s)	376, 1482, 1484, 1750
AspS9I	GGNCC	2 cut(s)	191, 1036
AsuC2I	CCSGG	1 cut(s)	1057
AsuHPI	GGTGA	2 cut(s)	659, 1079
AvaI	CYCGRG	2 cut(s)	500, 596
AvaII	GGWCC	1 cut(s)	1036
BaeGI	GKGCMC	2 cut(s)	1321, 2070
BamHI	GGATCC	1 cut(s)	877
BarI	GAAGNNNNNNTAC	2 cut(s)	385, 417
BbsI	GAAGAC	1 cut(s)	400
Bbv12I	GWGCWC	2 cut(s)	1321, 1933
BccI	CCATC	7 cut(s)	51, 311, 466, 526, 1265, 1405, 1649
BciT130I	CCWGG	4 cut(s)	737, 1310, 1470, 2044
BciVI	GTATCC	1 cut(s)	469
BclI	TGATCA	1 cut(s)	174
BcnI	CCSGG	1 cut(s)	1057
BcoDI	GTCTC	3 cut(s)	282, 1332, 1944
BcuI	ACTAGT	2 cut(s)	1205, 1759
BfaI	CTAG	7 cut(s)	306, 662, 962, 1206, 1760, 1818, 2090
BfmI	CTRYAG	1 cut(s)	30
BfoI	RGCGCY	2 cut(s)	377, 1751
BfrI	CTTAAG	2 cut(s)	872, 1633
BfuAI	ACCTGC	3 cut(s)	561, 1187, 1342
BfuI	GTATCC	1 cut(s)	469
BglII	AGATCT	1 cut(s)	1887
BlpI	GCTNAGC	1 cut(s)	1254
BmcAI	AGTACT	1 cut(s)	1204
Bme1390I	CCNGG	5 cut(s)	737, 1057, 1310, 1470, 2044
Bme18I	GGWCC	1 cut(s)	1036
BmeT110I	CYCGRG	2 cut(s)	500, 596
BmgT120I	GGNCC	2 cut(s)	191, 1036
BmiI	GGNNCC	4 cut(s)	166, 328, 879, 1467
BmrFI	CCNGG	5 cut(s)	737, 1057, 1310, 1470, 2044
BmsI	GCATC	8 cut(s)	206, 486, 873, 1000, 1346, 1631, 2021, 2043
BpiI	GAAGAC	1 cut(s)	400
BplI	GAGNNNNNCTC	2 cut(s)	902, 934
BpmI	CTGGAG	1 cut(s)	2139
Bpu1102I	GCTNAGC	1 cut(s)	1254
BpuEI	CTTGAG	1 cut(s)	1535
BpuMI	CCSGG	1 cut(s)	1057
BsaI	GGTCTC	2 cut(s)	282, 1332
BsaJI	CCNNGG	5 cut(s)	566, 838, 1056, 1906, 2076
BsaWI	WCCGGW	3 cut(s)	329, 379, 1142
Bsc4I	CCNNNNNNNGG	3 cut(s)	815, 962, 1142
Bse118I	RCCGGY	1 cut(s)	329
Bse1I	ACTGG	4 cut(s)	424, 685, 809, 820
Bse3DI	GCAATG	4 cut(s)	72, 1125, 1712, 1917
BseBI	CCWGG	4 cut(s)	737, 1310, 1470, 2044
BseDI	CCNNGG	5 cut(s)	566, 838, 1056, 1906, 2076
BseGI	GGATG	5 cut(s)	62, 438, 784, 1052, 2036
BseLI	CCNNNNNNNGG	3 cut(s)	815, 962, 1142
BseMI	GCAATG	4 cut(s)	72, 1125, 1712, 1917
BseMII	CTCAG	6 cut(s)	81, 357, 912, 1245, 1571, 2094
BseNI	ACTGG	4 cut(s)	424, 685, 809, 820
BsePI	GCGCGC	1 cut(s)	1480
BseRI	GAGGAG	5 cut(s)	21, 555, 942, 1545, 1978
BseSI	GKGCMC	2 cut(s)	1321, 2070
BseYI	CCCAGC	2 cut(s)	208, 983
BsgI	GTGCAG	1 cut(s)	1902
Bsh1236I	CGCG	3 cut(s)	1099, 1482, 1902
BshFI	GGCC	2 cut(s)	193, 1911
BshTI	ACCGGT	1 cut(s)	329
BsiHKAI	GWGCWC	2 cut(s)	1321, 1933
BsiHKCI	CYCGRG	2 cut(s)	500, 596
BsiSI	CCGG	4 cut(s)	330, 380, 1056, 1143
BslFI	GGGAC	3 cut(s)	600, 1022, 1389
BslI	CCNNNNNNNGG	3 cut(s)	815, 962, 1142
BsmAI	GTCTC	3 cut(s)	282, 1332, 1944
BsmFI	GGGAC	3 cut(s)	600, 1022, 1389
BsnI	GGCC	2 cut(s)	193, 1911
Bso31I	GGTCTC	2 cut(s)	282, 1332
BsoBI	CYCGRG	2 cut(s)	500, 596
Bsp1286I	GDGCHC	3 cut(s)	1321, 1933, 2070
Bsp143I	GATC	4 cut(s)	174, 877, 1092, 1887
Bsp1720I	GCTNAGC	1 cut(s)	1254
Bsp19I	CCATGG	1 cut(s)	838
BspACI	CCGC	1 cut(s)	214
BspANI	GGCC	2 cut(s)	193, 1911
BspCNI	CTCAG	6 cut(s)	80, 358, 913, 1246, 1570, 2095
BspFNI	CGCG	3 cut(s)	1099, 1482, 1902
BspLI	GGNNCC	4 cut(s)	166, 328, 879, 1467
BspMAI	CTGCAG	1 cut(s)	34
BspMI	ACCTGC	3 cut(s)	561, 1187, 1342
BspPI	GGATC	2 cut(s)	872, 885
BspTI	CTTAAG	2 cut(s)	872, 1633
BspTNI	GGTCTC	2 cut(s)	282, 1332
BsrDI	GCAATG	4 cut(s)	72, 1125, 1712, 1917
BsrFI	RCCGGY	1 cut(s)	329
BsrI	ACTGG	4 cut(s)	424, 685, 809, 820
BssAI	RCCGGY	1 cut(s)	329
BssECI	CCNNGG	5 cut(s)	566, 838, 1056, 1906, 2076
BssHII	GCGCGC	1 cut(s)	1480
BssMI	GATC	4 cut(s)	174, 877, 1092, 1887
BssT1I	CCWWGG	2 cut(s)	838, 2076
Bst2UI	CCWGG	4 cut(s)	737, 1310, 1470, 2044
Bst4CI	ACNGT	5 cut(s)	243, 414, 998, 1076, 1585
Bst6I	CTCTTC	4 cut(s)	696, 744, 777, 1634
BstAFI	CTTAAG	2 cut(s)	872, 1633
BstAPI	GCANNNNNTGC	1 cut(s)	29
BstC8I	GCNNGC	8 cut(s)	195, 950, 1239, 1482, 1528, 1702, 1752, 2084
BstDEI	CTNAG	7 cut(s)	67, 366, 921, 1254, 1557, 1783, 2103
BstDSI	CCRYGG	2 cut(s)	838, 1906
BstF5I	GGATG	5 cut(s)	62, 438, 784, 1052, 2036
BstFNI	CGCG	3 cut(s)	1099, 1482, 1902
BstH2I	RGCGCY	2 cut(s)	377, 1751
BstHHI	GCGC	4 cut(s)	376, 1482, 1484, 1750
BstKTI	GATC	4 cut(s)	177, 880, 1095, 1890
BstMAI	GTCTC	3 cut(s)	282, 1332, 1944
BstMBI	GATC	4 cut(s)	174, 877, 1092, 1887
BstMWI	GCNNNNNNNGC	9 cut(s)	29, 214, 223, 533, 942, 1193, 1385, 1908, 1928
BstNI	CCWGG	4 cut(s)	737, 1310, 1470, 2044
BstNSI	RCATGY	4 cut(s)	20, 49, 952, 2086
BstSCI	CCNGG	5 cut(s)	735, 1055, 1308, 1468, 2042
BstSFI	CTRYAG	1 cut(s)	30
BstSLI	GKGCMC	2 cut(s)	1321, 2070
BstUI	CGCG	3 cut(s)	1099, 1482, 1902
BstV2I	GAAGAC	1 cut(s)	400
BstX2I	RGATCY	2 cut(s)	877, 1887
BstYI	RGATCY	2 cut(s)	877, 1887
BsuI	GTATCC	1 cut(s)	469
BsuRI	GGCC	2 cut(s)	193, 1911
BtgI	CCRYGG	2 cut(s)	838, 1906
BtsCI	GGATG	5 cut(s)	62, 438, 784, 1052, 2036
BtsI	GCAGTG	2 cut(s)	973, 1812
BtsIMutI	CAGTG	5 cut(s)	239, 417, 678, 973, 1812
BveI	ACCTGC	3 cut(s)	561, 1187, 1342
Cac8I	GCNNGC	8 cut(s)	195, 950, 1239, 1482, 1528, 1702, 1752, 2084
CaiI	CAGNNNCTG	4 cut(s)	29, 83, 815, 1430
CfoI	GCGC	4 cut(s)	376, 1482, 1484, 1750
Cfr10I	RCCGGY	1 cut(s)	329
Cfr13I	GGNCC	2 cut(s)	191, 1036
CseI	GACGC	3 cut(s)	898, 1088, 1891
Csp6I	GTAC	3 cut(s)	706, 757, 1203
CspAI	ACCGGT	1 cut(s)	329
CspCI	CAANNNNNGTGG	2 cut(s)	1095, 1130
CviQI	GTAC	3 cut(s)	706, 757, 1203
DdeI	CTNAG	7 cut(s)	67, 366, 921, 1254, 1557, 1783, 2103
DpnI	GATC	4 cut(s)	176, 879, 1094, 1889
DpnII	GATC	4 cut(s)	174, 877, 1092, 1887
Eam1104I	CTCTTC	4 cut(s)	696, 744, 777, 1634
EarI	CTCTTC	4 cut(s)	696, 744, 777, 1634
Eco130I	CCWWGG	2 cut(s)	838, 2076
Eco31I	GGTCTC	2 cut(s)	282, 1332
Eco47I	GGWCC	1 cut(s)	1036
Eco57I	CTGAAG	2 cut(s)	768, 2118
Eco88I	CYCGRG	2 cut(s)	500, 596
EcoRI	GAATTC	2 cut(s)	104, 1609
EcoRII	CCWGG	4 cut(s)	735, 1308, 1468, 2042
EcoT14I	CCWWGG	2 cut(s)	838, 2076
EcoT22I	ATGCAT	1 cut(s)	2036
ErhI	CCWWGG	2 cut(s)	838, 2076
FaqI	GGGAC	3 cut(s)	600, 1022, 1389
FbaI	TGATCA	1 cut(s)	174
FblI	GTMKAC	1 cut(s)	1830
FokI	GGATG	5 cut(s)	69, 445, 791, 1039, 2043
FspBI	CTAG	7 cut(s)	306, 662, 962, 1206, 1760, 1818, 2090
GlaI	GCGC	4 cut(s)	375, 1481, 1483, 1749
GsaI	CCCAGC	2 cut(s)	212, 987
GsuI	CTGGAG	1 cut(s)	2139
HaeII	RGCGCY	2 cut(s)	377, 1751
HaeIII	GGCC	2 cut(s)	193, 1911
HapII	CCGG	4 cut(s)	330, 380, 1056, 1143
HgaI	GACGC	3 cut(s)	898, 1088, 1891
HhaI	GCGC	4 cut(s)	376, 1482, 1484, 1750
Hin6I	GCGC	4 cut(s)	374, 1480, 1482, 1748
HinP1I	GCGC	4 cut(s)	374, 1480, 1482, 1748
HincII	GTYRAC	1 cut(s)	1780
HindII	GTYRAC	1 cut(s)	1780
HinfI	GANTC	6 cut(s)	560, 591, 1043, 1296, 1473, 2016
HpaII	CCGG	4 cut(s)	330, 380, 1056, 1143
HphI	GGTGA	2 cut(s)	659, 1079
Hpy166II	GTNNAC	7 cut(s)	122, 417, 1117, 1319, 1780, 1831, 2056
Hpy188I	TCNGA	9 cut(s)	202, 367, 922, 1048, 1104, 1560, 2030, 2104, 2137
Hpy188III	TCNNGA	3 cut(s)	1495, 1514, 2090
Hpy8I	GTNNAC	7 cut(s)	122, 417, 1117, 1319, 1780, 1831, 2056
Hpy99I	CGWCG	1 cut(s)	1031
HpyAV	CCTTC	4 cut(s)	128, 662, 1273, 1277
HpyCH4III	ACNGT	5 cut(s)	243, 414, 998, 1076, 1585
HpyCH4IV	ACGT	1 cut(s)	2022
HpyF10VI	GCNNNNNNNGC	9 cut(s)	29, 214, 223, 533, 942, 1193, 1385, 1908, 1928
HpyF3I	CTNAG	7 cut(s)	67, 366, 921, 1254, 1557, 1783, 2103
HpySE526I	ACGT	1 cut(s)	2022
HspAI	GCGC	4 cut(s)	374, 1480, 1482, 1748
Ksp22I	TGATCA	1 cut(s)	174
Kzo9I	GATC	4 cut(s)	174, 877, 1092, 1887
LmnI	GCTCC	4 cut(s)	8, 164, 988, 1376
LweI	GCATC	8 cut(s)	206, 486, 873, 1000, 1346, 1631, 2021, 2043
MaeI	CTAG	7 cut(s)	306, 662, 962, 1206, 1760, 1818, 2090
MaeII	ACGT	1 cut(s)	2022
MaeIII	GTNAC	4 cut(s)	41, 340, 811, 886
MalI	GATC	4 cut(s)	176, 879, 1094, 1889
MboI	GATC	4 cut(s)	174, 877, 1092, 1887
MfeI	CAATTG	1 cut(s)	36
MflI	RGATCY	2 cut(s)	877, 1887
MhlI	GDGCHC	3 cut(s)	1321, 1933, 2070
MluCI	AATT	5 cut(s)	36, 104, 109, 1380, 1609
MlyI	GAGTC	2 cut(s)	1305, 1482
MmeI	TCCRAC	1 cut(s)	2008
Mph1103I	ATGCAT	1 cut(s)	2036
MroXI	GAANNNNTTC	1 cut(s)	1287
MseI	TTAA	8 cut(s)	624, 732, 873, 978, 1182, 1437, 1634, 1655
MslI	CAYNNNNRTG	2 cut(s)	484, 843
MspCI	CTTAAG	2 cut(s)	872, 1633
MspI	CCGG	4 cut(s)	330, 380, 1056, 1143
MspR9I	CCNGG	5 cut(s)	737, 1057, 1310, 1470, 2044
MunI	CAATTG	1 cut(s)	36
MvaI	CCWGG	4 cut(s)	737, 1310, 1470, 2044
MvnI	CGCG	3 cut(s)	1099, 1482, 1902
MwoI	GCNNNNNNNGC	9 cut(s)	29, 214, 223, 533, 942, 1193, 1385, 1908, 1928
NciI	CCSGG	1 cut(s)	1057
NcoI	CCATGG	1 cut(s)	838
NdeII	GATC	4 cut(s)	174, 877, 1092, 1887
NlaIV	GGNNCC	4 cut(s)	166, 328, 879, 1467
NmuCI	GTSAC	1 cut(s)	886
NsiI	ATGCAT	1 cut(s)	2036
NspI	RCATGY	4 cut(s)	20, 49, 952, 2086
OliI	CACNNNNGTG	1 cut(s)	484
PaeI	GCATGC	2 cut(s)	952, 2086
PaeR7I	CTCGAG	1 cut(s)	596
PauI	GCGCGC	1 cut(s)	1480
PciI	ACATGT	1 cut(s)	45
PdmI	GAANNNNTTC	1 cut(s)	1287
PfeI	GAWTC	4 cut(s)	560, 591, 1043, 2016
PflMI	CCANNNNNTGG	1 cut(s)	815
PfoI	TCCNGGA	1 cut(s)	2042
PinAI	ACCGGT	1 cut(s)	329
PleI	GAGTC	2 cut(s)	1304, 1481
PpsI	GAGTC	2 cut(s)	1304, 1481
PscI	ACATGT	1 cut(s)	45
PsiI	TTATAA	1 cut(s)	1245
Psp6I	CCWGG	4 cut(s)	735, 1308, 1468, 2042
PspFI	CCCAGC	2 cut(s)	208, 983
PspGI	CCWGG	4 cut(s)	735, 1308, 1468, 2042
PspN4I	GGNNCC	4 cut(s)	166, 328, 879, 1467
PspPI	GGNCC	2 cut(s)	191, 1036
PspXI	VCTCGAGB	1 cut(s)	596
PstI	CTGCAG	1 cut(s)	34
PstNI	CAGNNNCTG	4 cut(s)	29, 83, 815, 1430
PsuI	RGATCY	2 cut(s)	877, 1887
PteI	GCGCGC	1 cut(s)	1480
RsaI	GTAC	3 cut(s)	707, 758, 1204
RsaNI	GTAC	3 cut(s)	706, 757, 1203
RseI	CAYNNNNRTG	2 cut(s)	484, 843
SaqAI	TTAA	8 cut(s)	624, 732, 873, 978, 1182, 1437, 1634, 1655
Sau3AI	GATC	4 cut(s)	174, 877, 1092, 1887
Sau96I	GGNCC	2 cut(s)	191, 1036
ScaI	AGTACT	1 cut(s)	1204
SchI	GAGTC	2 cut(s)	1305, 1482
ScrFI	CCNGG	5 cut(s)	737, 1057, 1310, 1470, 2044
SduI	GDGCHC	3 cut(s)	1321, 1933, 2070
SfaNI	GCATC	8 cut(s)	206, 486, 873, 1000, 1346, 1631, 2021, 2043
SfcI	CTRYAG	1 cut(s)	30
Sfr274I	CTCGAG	1 cut(s)	596
SinI	GGWCC	1 cut(s)	1036
SlaI	CTCGAG	1 cut(s)	596
SmiMI	CAYNNNNRTG	2 cut(s)	484, 843
SmlI	CTYRAG	4 cut(s)	596, 872, 1514, 1633
SmoI	CTYRAG	4 cut(s)	596, 872, 1514, 1633
SpeI	ACTAGT	2 cut(s)	1205, 1759
SphI	GCATGC	2 cut(s)	952, 2086
Sse9I	AATT	5 cut(s)	36, 104, 109, 1380, 1609
SsiI	CCGC	1 cut(s)	214
SspI	AATATT	1 cut(s)	1873
SspMI	CTAG	7 cut(s)	306, 662, 962, 1206, 1760, 1818, 2090
StyD4I	CCNGG	5 cut(s)	735, 1055, 1308, 1468, 2042
StyI	CCWWGG	2 cut(s)	838, 2076
TaaI	ACNGT	5 cut(s)	243, 414, 998, 1076, 1585
TaiI	ACGT	1 cut(s)	2025
TaqI	TCGA	1 cut(s)	597
TaqII	GACCGA	1 cut(s)	1816
TasI	AATT	5 cut(s)	36, 104, 109, 1380, 1609
TatI	WGTACW	2 cut(s)	705, 1202
TauI	GCSGC	1 cut(s)	217
TfiI	GAWTC	4 cut(s)	560, 591, 1043, 2016
Tru1I	TTAA	8 cut(s)	624, 732, 873, 978, 1182, 1437, 1634, 1655
Tru9I	TTAA	8 cut(s)	624, 732, 873, 978, 1182, 1437, 1634, 1655
TscAI	CASTG	5 cut(s)	246, 424, 685, 973, 1819
TseFI	GTSAC	1 cut(s)	886
Tsp45I	GTSAC	1 cut(s)	886
TspDTI	ATGAA	2 cut(s)	795, 1056
TspGWI	ACGGA	1 cut(s)	1895
TspRI	CASTG	5 cut(s)	246, 424, 685, 973, 1819
Van91I	CCANNNNNTGG	1 cut(s)	815
Vha464I	CTTAAG	2 cut(s)	872, 1633
VneI	GTGCAC	1 cut(s)	1317
VpaK11BI	GGWCC	1 cut(s)	1036
XapI	RAATTY	2 cut(s)	104, 1609
XbaI	TCTAGA	1 cut(s)	2089
XceI	RCATGY	4 cut(s)	20, 49, 952, 2086
XcmI	CCANNNNNNNNNTGG	2 cut(s)	201, 1687
XhoI	CTCGAG	1 cut(s)	596
XmiI	GTMKAC	1 cut(s)	1830
XmnI	GAANNNNTTC	1 cut(s)	1287
XspI	CTAG	7 cut(s)	306, 662, 962, 1206, 1760, 1818, 2090
ZrmI	AGTACT	1 cut(s)	1204
Zsp2I	ATGCAT	1 cut(s)	2036

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.