RchiOBHm_Chr2g0129331
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
44982776 .. 44987791
5016 bp
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UTR
Exon/CDS
Intron
PRQ50098

Sequence Viewer

Length: 291 bp
ATGGAGCTGATAATGAATCAAGGGGTAATCAGTTTGTTATCTATCACAGCAGCTAATGGTGAAGATCCAGAAACCCTTCGAATGGTTGCTGGAGCCATTGCTAATCTTTGCGGAAACAATAAATTACAGAGCAAGCTAAGGACAGAAGGTGGCATTAAGGCATTGCTAGGAATGGTCAGATGTGGGCTTCCAGATGTTCTTGCACAAGTTGCCTGTGGGATTGGAAATTTCACAAAATTCGAGTCTAGGGCATCTATACAAGGGGGACCAAAAATGGAAGGTCTCTTTTGA

Protein Analysis

96

Amino Acids

10.05

Weight (kDa)

7.7

Isoelectric Point (pI)

33.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 111
AclWI GGATC 1 cut(s) 59
AcsI RAATTY 2 cut(s) 226, 236
AfiI CCNNNNNNNGG 1 cut(s) 82
AluBI AGCT 3 cut(s) 7, 53, 136
AluI AGCT 3 cut(s) 7, 53, 136
Alw26I GTCTC 1 cut(s) 287
AlwI GGATC 1 cut(s) 59
ApeKI GCWGC 1 cut(s) 50
ApoI RAATTY 2 cut(s) 226, 236
ArsI GACNNNNNNTTYG 2 cut(s) 227, 259
Asp700I GAANNNNTTC 1 cut(s) 75
AspS9I GGNCC 1 cut(s) 266
AsuHPI GGTGA 1 cut(s) 71
AsuII TTCGAA 1 cut(s) 79
AvaII GGWCC 1 cut(s) 266
BbvI GCAGC 1 cut(s) 62
BcoDI GTCTC 1 cut(s) 287
BfaI CTAG 2 cut(s) 167, 246
BisI GCNGC 1 cut(s) 51
BlsI GCNGC 1 cut(s) 52
Bme18I GGWCC 1 cut(s) 266
BmgT120I GGNCC 1 cut(s) 266
BmiI GGNNCC 2 cut(s) 94, 267
BmsI GCATC 1 cut(s) 260
BpmI CTGGAG 1 cut(s) 111
Bpu10I CCTNAGC 1 cut(s) 137
Bpu14I TTCGAA 1 cut(s) 79
BsaI GGTCTC 1 cut(s) 287
Bsc4I CCNNNNNNNGG 1 cut(s) 82
Bse3DI GCAATG 2 cut(s) 96, 161
BseLI CCNNNNNNNGG 1 cut(s) 82
BseMI GCAATG 2 cut(s) 96, 161
BseXI GCAGC 1 cut(s) 62
BslFI GGGAC 1 cut(s) 279
BslI CCNNNNNNNGG 1 cut(s) 82
BsmAI GTCTC 1 cut(s) 287
BsmFI GGGAC 1 cut(s) 279
Bso31I GGTCTC 1 cut(s) 287
Bsp119I TTCGAA 1 cut(s) 79
Bsp143I GATC 1 cut(s) 64
BspACI CCGC 1 cut(s) 111
BspLI GGNNCC 2 cut(s) 94, 267
BspPI GGATC 1 cut(s) 59
BspT104I TTCGAA 1 cut(s) 79
BspTNI GGTCTC 1 cut(s) 287
BsrDI GCAATG 2 cut(s) 96, 161
BssMI GATC 1 cut(s) 64
BstAPI GCANNNNNTGC 1 cut(s) 209
BstBI TTCGAA 1 cut(s) 79
BstC8I GCNNGC 1 cut(s) 134
BstDEI CTNAG 1 cut(s) 137
BstKTI GATC 1 cut(s) 67
BstMAI GTCTC 1 cut(s) 287
BstMBI GATC 1 cut(s) 64
BstMWI GCNNNNNNNGC 1 cut(s) 209
BstV1I GCAGC 1 cut(s) 62
BstX2I RGATCY 1 cut(s) 64
BstYI RGATCY 1 cut(s) 64
Cac8I GCNNGC 1 cut(s) 134
Cfr13I GGNCC 1 cut(s) 266
CviJI RGCY 5 cut(s) 7, 53, 95, 136, 187
CviKI_1 RGCY 5 cut(s) 7, 53, 95, 136, 187
DdeI CTNAG 1 cut(s) 137
DpnI GATC 1 cut(s) 66
DpnII GATC 1 cut(s) 64
Eco31I GGTCTC 1 cut(s) 287
Eco47I GGWCC 1 cut(s) 266
FaiI YATR 1 cut(s) 257
FaqI GGGAC 1 cut(s) 279
Fnu4HI GCNGC 1 cut(s) 51
Fsp4HI GCNGC 1 cut(s) 51
FspBI CTAG 2 cut(s) 167, 246
GluI GCNGC 1 cut(s) 51
GsuI CTGGAG 1 cut(s) 111
HinfI GANTC 2 cut(s) 16, 242
HphI GGTGA 1 cut(s) 71
Hpy188I TCNGA 1 cut(s) 179
Hpy188III TCNNGA 2 cut(s) 68, 191
HpyAV CCTTC 3 cut(s) 86, 140, 272
HpyCH4V TGCA 1 cut(s) 203
HpyF10VI GCNNNNNNNGC 1 cut(s) 209
HpyF3I CTNAG 1 cut(s) 137
Kzo9I GATC 1 cut(s) 64
LmnI GCTCC 2 cut(s) 4, 92
LpnPI CCDG 4 cut(s) 75, 81, 204, 226
Lsp1109I GCAGC 1 cut(s) 62
LweI GCATC 1 cut(s) 260
MaeI CTAG 2 cut(s) 167, 246
MalI GATC 1 cut(s) 66
MboI GATC 1 cut(s) 64
MboII GAAGA 1 cut(s) 74
MflI RGATCY 1 cut(s) 64
MluCI AATT 3 cut(s) 122, 226, 236
MlyI GAGTC 1 cut(s) 251
MroXI GAANNNNTTC 1 cut(s) 75
MseI TTAA 1 cut(s) 156
MwoI GCNNNNNNNGC 1 cut(s) 209
NdeII GATC 1 cut(s) 64
NlaIV GGNNCC 2 cut(s) 94, 267
NspV TTCGAA 1 cut(s) 79
PdmI GAANNNNTTC 1 cut(s) 75
PfeI GAWTC 1 cut(s) 16
PkrI GCNGC 1 cut(s) 52
PleI GAGTC 1 cut(s) 250
PpsI GAGTC 1 cut(s) 250
PspN4I GGNNCC 2 cut(s) 94, 267
PspPI GGNCC 1 cut(s) 266
PsuI RGATCY 1 cut(s) 64
SaqAI TTAA 1 cut(s) 156
SatI GCNGC 1 cut(s) 51
Sau3AI GATC 1 cut(s) 64
Sau96I GGNCC 1 cut(s) 266
SchI GAGTC 1 cut(s) 251
SetI ASST 5 cut(s) 9, 55, 138, 151, 283
SfaNI GCATC 1 cut(s) 260
SfuI TTCGAA 1 cut(s) 79
SinI GGWCC 1 cut(s) 266
Sse9I AATT 3 cut(s) 122, 226, 236
SsiI CCGC 1 cut(s) 111
SspMI CTAG 2 cut(s) 167, 246
TaqI TCGA 2 cut(s) 79, 240
TasI AATT 3 cut(s) 122, 226, 236
TfiI GAWTC 1 cut(s) 16
Tru1I TTAA 1 cut(s) 156
Tru9I TTAA 1 cut(s) 156
TseI GCWGC 1 cut(s) 50
TspDTI ATGAA 1 cut(s) 29
VpaK11BI GGWCC 1 cut(s) 266
XapI RAATTY 2 cut(s) 226, 236
XmnI GAANNNNTTC 1 cut(s) 75
XspI CTAG 2 cut(s) 167, 246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.