RchiOBHm_Chr7g0200981
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
18642063 .. 18643643
1581 bp
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UTR
Exon/CDS
Intron
PRQ17992

Sequence Viewer

Length: 294 bp
ATGATGGAGCTGATAATGAATCAAGGGGTGATTAGTTTGTTATCTATCACAGTAGCCAATGGTGAAGATCCAGAAACCCTTCGAATGGTTGCTGGAGCCATTGCTAATCTTTGCGGAAACAATAAATTACAGAGCAAGCTAAGTGCAGAAGGTGGCATTAAGGCATTGCTAGGAATGGTCAGATGTGGGCATCCAGATGTTCTTGCACAAGTTGCCTGTGGGATTGCAAATTTCACAAAATTCGAGTCTAGGGCATCTACACAAGGGGGACCAAAAATGGAAGGTCTCTTCTGA

Protein Analysis

97

Amino Acids

10.14

Weight (kDa)

6.54

Isoelectric Point (pI)

26.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 114
AclWI GGATC 1 cut(s) 62
AcsI RAATTY 2 cut(s) 229, 239
AfiI CCNNNNNNNGG 1 cut(s) 85
AluBI AGCT 2 cut(s) 10, 139
AluI AGCT 2 cut(s) 10, 139
Alw26I GTCTC 1 cut(s) 290
AlwI GGATC 1 cut(s) 62
ApoI RAATTY 2 cut(s) 229, 239
ArsI GACNNNNNNTTYG 2 cut(s) 230, 262
Asp700I GAANNNNTTC 1 cut(s) 78
AspS9I GGNCC 1 cut(s) 269
AsuHPI GGTGA 2 cut(s) 40, 74
AsuII TTCGAA 1 cut(s) 82
AvaII GGWCC 1 cut(s) 269
BcoDI GTCTC 1 cut(s) 290
BfaI CTAG 2 cut(s) 170, 249
Bme18I GGWCC 1 cut(s) 269
BmgT120I GGNCC 1 cut(s) 269
BmiI GGNNCC 2 cut(s) 97, 270
BmsI GCATC 2 cut(s) 199, 263
BpmI CTGGAG 1 cut(s) 114
Bpu14I TTCGAA 1 cut(s) 82
BsaI GGTCTC 1 cut(s) 290
Bsc4I CCNNNNNNNGG 1 cut(s) 85
Bse3DI GCAATG 2 cut(s) 99, 164
BseGI GGATG 1 cut(s) 190
BseLI CCNNNNNNNGG 1 cut(s) 85
BseMI GCAATG 2 cut(s) 99, 164
BsgI GTGCAG 1 cut(s) 165
BslFI GGGAC 1 cut(s) 282
BslI CCNNNNNNNGG 1 cut(s) 85
BsmAI GTCTC 1 cut(s) 290
BsmFI GGGAC 1 cut(s) 282
Bso31I GGTCTC 1 cut(s) 290
Bsp119I TTCGAA 1 cut(s) 82
Bsp143I GATC 1 cut(s) 67
BspACI CCGC 1 cut(s) 114
BspLI GGNNCC 2 cut(s) 97, 270
BspPI GGATC 1 cut(s) 62
BspT104I TTCGAA 1 cut(s) 82
BspTNI GGTCTC 1 cut(s) 290
BsrDI GCAATG 2 cut(s) 99, 164
BssMI GATC 1 cut(s) 67
Bst4CI ACNGT 1 cut(s) 52
BstAPI GCANNNNNTGC 1 cut(s) 212
BstBI TTCGAA 1 cut(s) 82
BstC8I GCNNGC 1 cut(s) 137
BstDEI CTNAG 1 cut(s) 140
BstF5I GGATG 1 cut(s) 190
BstKTI GATC 1 cut(s) 70
BstMAI GTCTC 1 cut(s) 290
BstMBI GATC 1 cut(s) 67
BstMWI GCNNNNNNNGC 1 cut(s) 212
BstX2I RGATCY 1 cut(s) 67
BstYI RGATCY 1 cut(s) 67
BtsCI GGATG 1 cut(s) 190
Cac8I GCNNGC 1 cut(s) 137
Cfr13I GGNCC 1 cut(s) 269
CviJI RGCY 4 cut(s) 10, 56, 98, 139
CviKI_1 RGCY 4 cut(s) 10, 56, 98, 139
DdeI CTNAG 1 cut(s) 140
DpnI GATC 1 cut(s) 69
DpnII GATC 1 cut(s) 67
Eco31I GGTCTC 1 cut(s) 290
Eco47I GGWCC 1 cut(s) 269
FaqI GGGAC 1 cut(s) 282
FokI GGATG 1 cut(s) 177
FspBI CTAG 2 cut(s) 170, 249
GsuI CTGGAG 1 cut(s) 114
HinfI GANTC 2 cut(s) 19, 245
HphI GGTGA 2 cut(s) 40, 74
Hpy188I TCNGA 2 cut(s) 182, 293
Hpy188III TCNNGA 2 cut(s) 71, 194
HpyAV CCTTC 3 cut(s) 89, 143, 275
HpyCH4III ACNGT 1 cut(s) 52
HpyCH4V TGCA 3 cut(s) 146, 206, 227
HpyF10VI GCNNNNNNNGC 1 cut(s) 212
HpyF3I CTNAG 1 cut(s) 140
Kzo9I GATC 1 cut(s) 67
LmnI GCTCC 2 cut(s) 7, 95
LpnPI CCDG 4 cut(s) 78, 84, 207, 229
LweI GCATC 2 cut(s) 199, 263
MaeI CTAG 2 cut(s) 170, 249
MalI GATC 1 cut(s) 69
MboI GATC 1 cut(s) 67
MboII GAAGA 2 cut(s) 77, 280
MflI RGATCY 1 cut(s) 67
MluCI AATT 3 cut(s) 125, 229, 239
MlyI GAGTC 1 cut(s) 254
MroXI GAANNNNTTC 1 cut(s) 78
MseI TTAA 1 cut(s) 159
MslI CAYNNNNRTG 1 cut(s) 195
MwoI GCNNNNNNNGC 1 cut(s) 212
NdeII GATC 1 cut(s) 67
NlaIV GGNNCC 2 cut(s) 97, 270
NspV TTCGAA 1 cut(s) 82
PdmI GAANNNNTTC 1 cut(s) 78
PfeI GAWTC 1 cut(s) 19
PleI GAGTC 1 cut(s) 253
PpsI GAGTC 1 cut(s) 253
PspN4I GGNNCC 2 cut(s) 97, 270
PspPI GGNCC 1 cut(s) 269
PsuI RGATCY 1 cut(s) 67
RseI CAYNNNNRTG 1 cut(s) 195
SaqAI TTAA 1 cut(s) 159
Sau3AI GATC 1 cut(s) 67
Sau96I GGNCC 1 cut(s) 269
SchI GAGTC 1 cut(s) 254
SetI ASST 4 cut(s) 12, 141, 154, 286
SfaNI GCATC 2 cut(s) 199, 263
SfuI TTCGAA 1 cut(s) 82
SinI GGWCC 1 cut(s) 269
SmiMI CAYNNNNRTG 1 cut(s) 195
Sse9I AATT 3 cut(s) 125, 229, 239
SsiI CCGC 1 cut(s) 114
SspMI CTAG 2 cut(s) 170, 249
TaaI ACNGT 1 cut(s) 52
TaqI TCGA 2 cut(s) 82, 243
TasI AATT 3 cut(s) 125, 229, 239
TfiI GAWTC 1 cut(s) 19
Tru1I TTAA 1 cut(s) 159
Tru9I TTAA 1 cut(s) 159
TspDTI ATGAA 1 cut(s) 32
VpaK11BI GGWCC 1 cut(s) 269
XapI RAATTY 2 cut(s) 229, 239
XmnI GAANNNNTTC 1 cut(s) 78
XspI CTAG 2 cut(s) 170, 249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.