Rh7DG191500
HSP70 Family

Heat shock cognate 70 kDa

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0012661
Physical Location & Seq
Forward (+)
17805861 .. 17815017
9157 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG191500.1

Sequence Viewer

Length: 456 bp
ATGGCTGCAAAAGATGTGGGTCCAGCGATTGGTATTGATCTCGGAACAACTTACTCATGTGTTGGAATATGGCAACACGGTCACGTTGAGATCATAGCTAATGACCAAGGCAACAGAACGACACCGTCTTATGTTGCTTTTACCAACAATGGTCGTTTGATTGGTGATGCCGCTAAGAATCAAGTCTCTACGAACCCTACTAACACTGTATTTGCAGCTAATGGTGAAGATCCAGAAACCCATCGAATAGTTGCTGGAGCCATTGCTAATCTTTGCAGAAACAATAAATTACAGAGCAAGCTAAGGGCAGAAGGTGGCATTAAGGCATTGCTAGGAATGGTCAGATGTGGGCTTCCAGATGTTCTTGCACAAGTTGCCTGTGGGATTGCAAATTTCACAAAATTCGAGTCTAGGGCATCTACAAAAGGGGGACCAAAAATGGAAGGTCTCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

151

Amino Acids

15.86

Weight (kDa)

8.76

Isoelectric Point (pI)

20.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 9 - 73 1.9e-27 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 29
AciI CCGC 1 cut(s) 171
AclWI GGATC 1 cut(s) 224
AcsI RAATTY 2 cut(s) 391, 401
AfiI CCNNNNNNNGG 1 cut(s) 29
AluBI AGCT 3 cut(s) 98, 218, 301
AluI AGCT 3 cut(s) 98, 218, 301
Alw26I GTCTC 2 cut(s) 190, 452
AlwI GGATC 1 cut(s) 224
ApeKI GCWGC 2 cut(s) 5, 215
ApoI RAATTY 2 cut(s) 391, 401
ArsI GACNNNNNNTTYG 2 cut(s) 392, 424
AspS9I GGNCC 2 cut(s) 20, 431
AsuHPI GGTGA 2 cut(s) 176, 236
AvaII GGWCC 2 cut(s) 20, 431
BbvI GCAGC 1 cut(s) 227
BccI CCATC 1 cut(s) 249
BcoDI GTCTC 2 cut(s) 190, 452
BfaI CTAG 2 cut(s) 332, 411
BisI GCNGC 3 cut(s) 6, 171, 216
BlsI GCNGC 3 cut(s) 7, 172, 217
Bme18I GGWCC 2 cut(s) 20, 431
BmgT120I GGNCC 2 cut(s) 20, 431
BmiI GGNNCC 3 cut(s) 21, 259, 432
BmsI GCATC 2 cut(s) 157, 425
BpmI CTGGAG 1 cut(s) 276
Bpu10I CCTNAGC 1 cut(s) 302
BsaI GGTCTC 1 cut(s) 452
BsaJI CCNNGG 1 cut(s) 106
Bsc4I CCNNNNNNNGG 1 cut(s) 29
Bse3DI GCAATG 2 cut(s) 261, 326
BseDI CCNNGG 1 cut(s) 106
BseLI CCNNNNNNNGG 1 cut(s) 29
BseMI GCAATG 2 cut(s) 261, 326
BseXI GCAGC 1 cut(s) 227
BslFI GGGAC 1 cut(s) 444
BslI CCNNNNNNNGG 1 cut(s) 29
BsmAI GTCTC 2 cut(s) 190, 452
BsmFI GGGAC 1 cut(s) 444
Bso31I GGTCTC 1 cut(s) 452
Bsp143I GATC 3 cut(s) 37, 90, 229
BspACI CCGC 1 cut(s) 171
BspLI GGNNCC 3 cut(s) 21, 259, 432
BspPI GGATC 1 cut(s) 224
BspTNI GGTCTC 1 cut(s) 452
BsrDI GCAATG 2 cut(s) 261, 326
BssECI CCNNGG 1 cut(s) 106
BssMI GATC 3 cut(s) 37, 90, 229
BssT1I CCWWGG 1 cut(s) 106
Bst4CI ACNGT 3 cut(s) 80, 126, 208
BstAPI GCANNNNNTGC 1 cut(s) 374
BstC8I GCNNGC 1 cut(s) 299
BstDEI CTNAG 2 cut(s) 174, 302
BstKTI GATC 3 cut(s) 40, 93, 232
BstMAI GTCTC 2 cut(s) 190, 452
BstMBI GATC 3 cut(s) 37, 90, 229
BstMWI GCNNNNNNNGC 1 cut(s) 374
BstV1I GCAGC 1 cut(s) 227
BstX2I RGATCY 1 cut(s) 229
BstYI RGATCY 1 cut(s) 229
BtsIMutI CAGTG 1 cut(s) 204
Cac8I GCNNGC 1 cut(s) 299
Cfr13I GGNCC 2 cut(s) 20, 431
CspCI CAANNNNNGTGG 1 cut(s) 32
CviAII CATG 1 cut(s) 57
CviJI RGCY 6 cut(s) 5, 98, 218, 260, 301, 352
CviKI_1 RGCY 6 cut(s) 5, 98, 218, 260, 301, 352
DdeI CTNAG 2 cut(s) 174, 302
DpnI GATC 3 cut(s) 39, 92, 231
DpnII GATC 3 cut(s) 37, 90, 229
Eco130I CCWWGG 1 cut(s) 106
Eco31I GGTCTC 1 cut(s) 452
Eco47I GGWCC 2 cut(s) 20, 431
EcoT14I CCWWGG 1 cut(s) 106
ErhI CCWWGG 1 cut(s) 106
FaeI CATG 1 cut(s) 60
FaiI YATR 4 cut(s) 58, 70, 95, 132
FaqI GGGAC 1 cut(s) 444
FatI CATG 1 cut(s) 56
Fnu4HI GCNGC 3 cut(s) 6, 171, 216
Fsp4HI GCNGC 3 cut(s) 6, 171, 216
FspBI CTAG 2 cut(s) 332, 411
GluI GCNGC 3 cut(s) 6, 171, 216
GsuI CTGGAG 1 cut(s) 276
Hin1II CATG 1 cut(s) 60
HinfI GANTC 2 cut(s) 178, 407
HphI GGTGA 2 cut(s) 176, 236
Hpy188I TCNGA 2 cut(s) 44, 344
Hpy188III TCNNGA 2 cut(s) 233, 356
HpyAV CCTTC 2 cut(s) 305, 437
HpyCH4III ACNGT 3 cut(s) 80, 126, 208
HpyCH4IV ACGT 1 cut(s) 84
HpyCH4V TGCA 5 cut(s) 8, 215, 276, 368, 389
HpyF10VI GCNNNNNNNGC 1 cut(s) 374
HpyF3I CTNAG 2 cut(s) 174, 302
HpySE526I ACGT 1 cut(s) 84
Hsp92II CATG 1 cut(s) 60
Kzo9I GATC 3 cut(s) 37, 90, 229
LmnI GCTCC 1 cut(s) 257
LpnPI CCDG 5 cut(s) 36, 240, 246, 369, 391
Lsp1109I GCAGC 1 cut(s) 227
LweI GCATC 2 cut(s) 157, 425
MaeI CTAG 2 cut(s) 332, 411
MaeII ACGT 1 cut(s) 84
MaeIII GTNAC 1 cut(s) 80
MalI GATC 3 cut(s) 39, 92, 231
MboI GATC 3 cut(s) 37, 90, 229
MboII GAAGA 1 cut(s) 239
MflI RGATCY 1 cut(s) 229
MluCI AATT 3 cut(s) 287, 391, 401
MlyI GAGTC 1 cut(s) 416
MmeI TCCRAC 1 cut(s) 43
MseI TTAA 1 cut(s) 321
MwoI GCNNNNNNNGC 1 cut(s) 374
NdeII GATC 3 cut(s) 37, 90, 229
NlaIII CATG 1 cut(s) 60
NlaIV GGNNCC 3 cut(s) 21, 259, 432
NmuCI GTSAC 1 cut(s) 80
PfeI GAWTC 1 cut(s) 178
PflFI GACNNNGTC 1 cut(s) 124
PflMI CCANNNNNTGG 1 cut(s) 29
PkrI GCNGC 3 cut(s) 7, 172, 217
PleI GAGTC 1 cut(s) 415
PpsI GAGTC 1 cut(s) 415
PspN4I GGNNCC 3 cut(s) 21, 259, 432
PspPI GGNCC 2 cut(s) 20, 431
PsuI RGATCY 1 cut(s) 229
PsyI GACNNNGTC 1 cut(s) 124
SaqAI TTAA 1 cut(s) 321
SatI GCNGC 3 cut(s) 6, 171, 216
Sau3AI GATC 3 cut(s) 37, 90, 229
Sau96I GGNCC 2 cut(s) 20, 431
SchI GAGTC 1 cut(s) 416
SetI ASST 6 cut(s) 87, 100, 220, 303, 316, 448
SfaNI GCATC 2 cut(s) 157, 425
SinI GGWCC 2 cut(s) 20, 431
Sse9I AATT 3 cut(s) 287, 391, 401
SsiI CCGC 1 cut(s) 171
SspMI CTAG 2 cut(s) 332, 411
StyI CCWWGG 1 cut(s) 106
TaaI ACNGT 3 cut(s) 80, 126, 208
TaiI ACGT 1 cut(s) 87
TaqI TCGA 2 cut(s) 244, 405
TasI AATT 3 cut(s) 287, 391, 401
TauI GCSGC 1 cut(s) 173
TfiI GAWTC 1 cut(s) 178
Tru1I TTAA 1 cut(s) 321
Tru9I TTAA 1 cut(s) 321
TscAI CASTG 1 cut(s) 211
TseFI GTSAC 1 cut(s) 80
TseI GCWGC 2 cut(s) 5, 215
Tsp45I GTSAC 1 cut(s) 80
TspRI CASTG 1 cut(s) 211
Tth111I GACNNNGTC 1 cut(s) 124
Van91I CCANNNNNTGG 1 cut(s) 29
VpaK11BI GGWCC 2 cut(s) 20, 431
XapI RAATTY 2 cut(s) 391, 401
XspI CTAG 2 cut(s) 332, 411
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.