RLG00000003711
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
51912467 .. 51913269
803 bp
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UTR
Exon/CDS
Intron
RLM00000003711

Sequence Viewer

Length: 321 bp
ATGAGGCCTGTCAAACAATCAAATATAATAAAATCCCTTGCTAATTCAATTACAGATAAGCTACAGAGCAAGCTAAGGGCTGAAGGTGGCATTAAGGCATTGCTAGGAATGGTCAGAGGTGGGCGTCCAGATGTTCTTGCACAAGTTGCTCATGGGATTGCAAATTTCGCAAAATGCGAGTCTAGGGCATCTACACAATGTCGAAGACTATCAAAAAGGGGGACCAAAAAAGGAAGGCGCCACATTGAGCTAGCATTATGCCACTTAGCGCGACATGAAACAAATGCAAAAAACATGATCTGTGGTGGTGCATTGTGCTAG

Protein Analysis

107

Amino Acids

11.52

Weight (kDa)

10.75

Isoelectric Point (pI)

52.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 237
AccII CGCG 1 cut(s) 271
AcsI RAATTY 1 cut(s) 163
AcuI CTGAAG 1 cut(s) 102
AcyI GRCGYC 2 cut(s) 124, 238
AgsI TTSAA 1 cut(s) 48
AluBI AGCT 3 cut(s) 61, 73, 250
AluI AGCT 3 cut(s) 61, 73, 250
AoxI GGCC 1 cut(s) 5
ApoI RAATTY 1 cut(s) 163
ArsI GACNNNNNNTTYG 2 cut(s) 164, 196
AspLEI GCGC 2 cut(s) 240, 271
AspS9I GGNCC 1 cut(s) 222
AsuNHI GCTAGC 1 cut(s) 250
AvaII GGWCC 1 cut(s) 222
BanI GGYRCC 1 cut(s) 237
BbsI GAAGAC 1 cut(s) 211
BfaI CTAG 4 cut(s) 104, 183, 251, 319
BfmI CTRYAG 1 cut(s) 62
BfoI RGCGCY 1 cut(s) 241
Bme18I GGWCC 1 cut(s) 222
BmgT120I GGNCC 1 cut(s) 222
BmiI GGNNCC 2 cut(s) 223, 239
BmsI GCATC 1 cut(s) 197
BmtI GCTAGC 1 cut(s) 254
BpiI GAAGAC 1 cut(s) 211
Bpu10I CCTNAGC 1 cut(s) 74
BsaHI GRCGYC 2 cut(s) 124, 238
Bse3DI GCAATG 1 cut(s) 98
BseMI GCAATG 1 cut(s) 98
Bsh1236I CGCG 1 cut(s) 271
BshFI GGCC 1 cut(s) 7
BshNI GGYRCC 1 cut(s) 237
BslFI GGGAC 1 cut(s) 235
BsmFI GGGAC 1 cut(s) 235
BsnI GGCC 1 cut(s) 7
Bsp143I GATC 1 cut(s) 297
BspANI GGCC 1 cut(s) 7
BspFNI CGCG 1 cut(s) 271
BspLI GGNNCC 2 cut(s) 223, 239
BspOI GCTAGC 1 cut(s) 254
BspT107I GGYRCC 1 cut(s) 237
BsrDI GCAATG 1 cut(s) 98
BssMI GATC 1 cut(s) 297
BssNI GRCGYC 2 cut(s) 124, 238
BstACI GRCGYC 2 cut(s) 124, 238
BstAPI GCANNNNNTGC 1 cut(s) 146
BstC8I GCNNGC 2 cut(s) 71, 252
BstDEI CTNAG 2 cut(s) 74, 265
BstFNI CGCG 1 cut(s) 271
BstH2I RGCGCY 1 cut(s) 241
BstHHI GCGC 2 cut(s) 240, 271
BstKTI GATC 1 cut(s) 300
BstMBI GATC 1 cut(s) 297
BstMWI GCNNNNNNNGC 2 cut(s) 146, 167
BstSFI CTRYAG 1 cut(s) 62
BstUI CGCG 1 cut(s) 271
BstV2I GAAGAC 1 cut(s) 211
BsuRI GGCC 1 cut(s) 7
Cac8I GCNNGC 2 cut(s) 71, 252
CfoI GCGC 2 cut(s) 240, 271
Cfr13I GGNCC 1 cut(s) 222
CseI GACGC 1 cut(s) 113
CviAII CATG 3 cut(s) 152, 275, 295
CviJI RGCY 5 cut(s) 7, 61, 73, 80, 250
CviKI_1 RGCY 5 cut(s) 7, 61, 73, 80, 250
DdeI CTNAG 2 cut(s) 74, 265
DinI GGCGCC 1 cut(s) 239
DpnI GATC 1 cut(s) 299
DpnII GATC 1 cut(s) 297
Eco147I AGGCCT 1 cut(s) 7
Eco47I GGWCC 1 cut(s) 222
Eco57I CTGAAG 1 cut(s) 102
EgeI GGCGCC 1 cut(s) 239
EheI GGCGCC 1 cut(s) 239
FaeI CATG 3 cut(s) 155, 278, 298
FaiI YATR 5 cut(s) 26, 153, 259, 276, 296
FaqI GGGAC 1 cut(s) 235
FatI CATG 3 cut(s) 151, 274, 294
FspBI CTAG 4 cut(s) 104, 183, 251, 319
GlaI GCGC 2 cut(s) 239, 270
HaeII RGCGCY 1 cut(s) 241
HaeIII GGCC 1 cut(s) 7
HgaI GACGC 1 cut(s) 113
HhaI GCGC 2 cut(s) 240, 271
Hin1I GRCGYC 2 cut(s) 124, 238
Hin1II CATG 3 cut(s) 155, 278, 298
Hin6I GCGC 2 cut(s) 238, 269
HinP1I GCGC 2 cut(s) 238, 269
HinfI GANTC 1 cut(s) 179
Hpy188I TCNGA 1 cut(s) 116
Hpy188III TCNNGA 1 cut(s) 128
HpyAV CCTTC 2 cut(s) 77, 228
HpyCH4V TGCA 4 cut(s) 140, 161, 287, 311
HpyF10VI GCNNNNNNNGC 2 cut(s) 146, 167
HpyF3I CTNAG 2 cut(s) 74, 265
Hsp92I GRCGYC 2 cut(s) 124, 238
Hsp92II CATG 3 cut(s) 155, 278, 298
HspAI GCGC 2 cut(s) 238, 269
KasI GGCGCC 1 cut(s) 237
Kzo9I GATC 1 cut(s) 297
LpnPI CCDG 2 cut(s) 21, 141
LweI GCATC 1 cut(s) 197
MaeI CTAG 4 cut(s) 104, 183, 251, 319
MalI GATC 1 cut(s) 299
MboI GATC 1 cut(s) 297
MboII GAAGA 1 cut(s) 216
MluCI AATT 3 cut(s) 43, 48, 163
Mly113I GGCGCC 1 cut(s) 238
MlyI GAGTC 1 cut(s) 188
MnlI CCTC 1 cut(s) 110
MseI TTAA 1 cut(s) 93
MvnI CGCG 1 cut(s) 271
MwoI GCNNNNNNNGC 2 cut(s) 146, 167
NarI GGCGCC 1 cut(s) 238
NdeII GATC 1 cut(s) 297
NheI GCTAGC 1 cut(s) 250
NlaIII CATG 3 cut(s) 155, 278, 298
NlaIV GGNNCC 2 cut(s) 223, 239
PceI AGGCCT 1 cut(s) 7
PcsI WCGNNNNNNNCGW 1 cut(s) 174
PleI GAGTC 1 cut(s) 187
PluTI GGCGCC 1 cut(s) 241
PpsI GAGTC 1 cut(s) 187
PspN4I GGNNCC 2 cut(s) 223, 239
PspPI GGNCC 1 cut(s) 222
SaqAI TTAA 1 cut(s) 93
Sau3AI GATC 1 cut(s) 297
Sau96I GGNCC 1 cut(s) 222
SchI GAGTC 1 cut(s) 188
SetI ASST 5 cut(s) 63, 75, 88, 121, 252
SfaNI GCATC 1 cut(s) 197
SfcI CTRYAG 1 cut(s) 62
SfoI GGCGCC 1 cut(s) 239
SinI GGWCC 1 cut(s) 222
Sse9I AATT 3 cut(s) 43, 48, 163
SseBI AGGCCT 1 cut(s) 7
SspDI GGCGCC 1 cut(s) 237
SspMI CTAG 4 cut(s) 104, 183, 251, 319
StuI AGGCCT 1 cut(s) 7
TaqI TCGA 1 cut(s) 202
TasI AATT 3 cut(s) 43, 48, 163
Tru1I TTAA 1 cut(s) 93
Tru9I TTAA 1 cut(s) 93
TspDTI ATGAA 1 cut(s) 291
VpaK11BI GGWCC 1 cut(s) 222
XapI RAATTY 1 cut(s) 163
XspI CTAG 4 cut(s) 104, 183, 251, 319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.