Rw0G002950
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00094
Physical Location & Seq
Reverse (-)
33670 .. 35129
1460 bp
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UTR
Exon/CDS
Intron
Rw0G002950.1

Sequence Viewer

Length: 279 bp
ATGAATCAAGGGGTAATCAGTTTGTTATCTATCACAGCAGCTAATGGTGAAGATCCAGAAACCCTTCGAATGGTTGCTGGAGCCATTGCTAATCTTTGCGGAAACAATAAATTACAGAGCAAGCTAAGGACAGAAGGTGGCATTAAGGCATTGCTAGGAATGGTCAGATGTGGGCTTCCAGATGTTCTTGCACAAGTTGCCTGTGGGATTGGAAATTTCACAAAATTCGAGTCTAGGGCATCTATACAAGGGGGACCAAAAATGGAAGGTCTCTTTTGA

Protein Analysis

92

Amino Acids

9.56

Weight (kDa)

8.59

Isoelectric Point (pI)

34.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 99
AclWI GGATC 1 cut(s) 47
AcsI RAATTY 2 cut(s) 214, 224
AfiI CCNNNNNNNGG 1 cut(s) 70
AluBI AGCT 2 cut(s) 41, 124
AluI AGCT 2 cut(s) 41, 124
Alw26I GTCTC 1 cut(s) 275
AlwI GGATC 1 cut(s) 47
ApeKI GCWGC 1 cut(s) 38
ApoI RAATTY 2 cut(s) 214, 224
ArsI GACNNNNNNTTYG 2 cut(s) 215, 247
Asp700I GAANNNNTTC 1 cut(s) 63
AspS9I GGNCC 1 cut(s) 254
AsuHPI GGTGA 1 cut(s) 59
AsuII TTCGAA 1 cut(s) 67
AvaII GGWCC 1 cut(s) 254
BbvI GCAGC 1 cut(s) 50
BcoDI GTCTC 1 cut(s) 275
BfaI CTAG 2 cut(s) 155, 234
BisI GCNGC 1 cut(s) 39
BlsI GCNGC 1 cut(s) 40
Bme18I GGWCC 1 cut(s) 254
BmgT120I GGNCC 1 cut(s) 254
BmiI GGNNCC 2 cut(s) 82, 255
BmsI GCATC 1 cut(s) 248
BpmI CTGGAG 1 cut(s) 99
Bpu10I CCTNAGC 1 cut(s) 125
Bpu14I TTCGAA 1 cut(s) 67
BsaI GGTCTC 1 cut(s) 275
Bsc4I CCNNNNNNNGG 1 cut(s) 70
Bse3DI GCAATG 2 cut(s) 84, 149
BseLI CCNNNNNNNGG 1 cut(s) 70
BseMI GCAATG 2 cut(s) 84, 149
BseXI GCAGC 1 cut(s) 50
BslFI GGGAC 1 cut(s) 267
BslI CCNNNNNNNGG 1 cut(s) 70
BsmAI GTCTC 1 cut(s) 275
BsmFI GGGAC 1 cut(s) 267
Bso31I GGTCTC 1 cut(s) 275
Bsp119I TTCGAA 1 cut(s) 67
Bsp143I GATC 1 cut(s) 52
BspACI CCGC 1 cut(s) 99
BspLI GGNNCC 2 cut(s) 82, 255
BspPI GGATC 1 cut(s) 47
BspT104I TTCGAA 1 cut(s) 67
BspTNI GGTCTC 1 cut(s) 275
BsrDI GCAATG 2 cut(s) 84, 149
BssMI GATC 1 cut(s) 52
BstAPI GCANNNNNTGC 1 cut(s) 197
BstBI TTCGAA 1 cut(s) 67
BstC8I GCNNGC 1 cut(s) 122
BstDEI CTNAG 1 cut(s) 125
BstKTI GATC 1 cut(s) 55
BstMAI GTCTC 1 cut(s) 275
BstMBI GATC 1 cut(s) 52
BstMWI GCNNNNNNNGC 1 cut(s) 197
BstV1I GCAGC 1 cut(s) 50
BstX2I RGATCY 1 cut(s) 52
BstYI RGATCY 1 cut(s) 52
Cac8I GCNNGC 1 cut(s) 122
Cfr13I GGNCC 1 cut(s) 254
CviJI RGCY 4 cut(s) 41, 83, 124, 175
CviKI_1 RGCY 4 cut(s) 41, 83, 124, 175
DdeI CTNAG 1 cut(s) 125
DpnI GATC 1 cut(s) 54
DpnII GATC 1 cut(s) 52
Eco31I GGTCTC 1 cut(s) 275
Eco47I GGWCC 1 cut(s) 254
FaiI YATR 1 cut(s) 245
FaqI GGGAC 1 cut(s) 267
Fnu4HI GCNGC 1 cut(s) 39
Fsp4HI GCNGC 1 cut(s) 39
FspBI CTAG 2 cut(s) 155, 234
GluI GCNGC 1 cut(s) 39
GsuI CTGGAG 1 cut(s) 99
HinfI GANTC 2 cut(s) 4, 230
HphI GGTGA 1 cut(s) 59
Hpy188I TCNGA 1 cut(s) 167
Hpy188III TCNNGA 2 cut(s) 56, 179
HpyAV CCTTC 3 cut(s) 74, 128, 260
HpyCH4V TGCA 1 cut(s) 191
HpyF10VI GCNNNNNNNGC 1 cut(s) 197
HpyF3I CTNAG 1 cut(s) 125
Kzo9I GATC 1 cut(s) 52
LmnI GCTCC 1 cut(s) 80
LpnPI CCDG 4 cut(s) 63, 69, 192, 214
Lsp1109I GCAGC 1 cut(s) 50
LweI GCATC 1 cut(s) 248
MaeI CTAG 2 cut(s) 155, 234
MalI GATC 1 cut(s) 54
MboI GATC 1 cut(s) 52
MboII GAAGA 1 cut(s) 62
MflI RGATCY 1 cut(s) 52
MluCI AATT 3 cut(s) 110, 214, 224
MlyI GAGTC 1 cut(s) 239
MroXI GAANNNNTTC 1 cut(s) 63
MseI TTAA 1 cut(s) 144
MwoI GCNNNNNNNGC 1 cut(s) 197
NdeII GATC 1 cut(s) 52
NlaIV GGNNCC 2 cut(s) 82, 255
NspV TTCGAA 1 cut(s) 67
PdmI GAANNNNTTC 1 cut(s) 63
PfeI GAWTC 1 cut(s) 4
PkrI GCNGC 1 cut(s) 40
PleI GAGTC 1 cut(s) 238
PpsI GAGTC 1 cut(s) 238
PspN4I GGNNCC 2 cut(s) 82, 255
PspPI GGNCC 1 cut(s) 254
PsuI RGATCY 1 cut(s) 52
SaqAI TTAA 1 cut(s) 144
SatI GCNGC 1 cut(s) 39
Sau3AI GATC 1 cut(s) 52
Sau96I GGNCC 1 cut(s) 254
SchI GAGTC 1 cut(s) 239
SetI ASST 4 cut(s) 43, 126, 139, 271
SfaNI GCATC 1 cut(s) 248
SfuI TTCGAA 1 cut(s) 67
SinI GGWCC 1 cut(s) 254
Sse9I AATT 3 cut(s) 110, 214, 224
SsiI CCGC 1 cut(s) 99
SspMI CTAG 2 cut(s) 155, 234
TaqI TCGA 2 cut(s) 67, 228
TasI AATT 3 cut(s) 110, 214, 224
TfiI GAWTC 1 cut(s) 4
Tru1I TTAA 1 cut(s) 144
Tru9I TTAA 1 cut(s) 144
TseI GCWGC 1 cut(s) 38
TspDTI ATGAA 1 cut(s) 17
VpaK11BI GGWCC 1 cut(s) 254
XapI RAATTY 2 cut(s) 214, 224
XmnI GAANNNNTTC 1 cut(s) 63
XspI CTAG 2 cut(s) 155, 234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.