RchiOBHm_Chr2g0140831

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
58394455 .. 58397744
3290 bp
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UTR
Exon/CDS
Intron
PRQ51122

Sequence Viewer

Length: 141 bp
ATGGTCTACAATACTGAAACTGATATTCTACATGGCGATCCTCTGGGCAGGTTGAAGTCATCCATGGAGGAGAAGAGGAAATTGCAGATATCATGCCTAGAATTAAGGCTGCCAATTTTCTTTTCCCACAAAGTGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

46

Amino Acids

5.39

Weight (kDa)

7.95

Isoelectric Point (pI)

57.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 39
AccI GTMKAC 1 cut(s) 6
AclWI GGATC 1 cut(s) 32
AdeI CACNNNGTG 1 cut(s) 133
AgsI TTSAA 1 cut(s) 55
AjuI GAANNNNNNNTTGG 2 cut(s) 106, 138
AlwI GGATC 1 cut(s) 32
ApeKI GCWGC 1 cut(s) 109
BbvI GCAGC 1 cut(s) 96
BfaI CTAG 1 cut(s) 98
BfuAI ACCTGC 1 cut(s) 39
BisI GCNGC 1 cut(s) 110
BlsI GCNGC 1 cut(s) 111
BsaJI CCNNGG 1 cut(s) 63
BseDI CCNNGG 1 cut(s) 63
BseGI GGATG 1 cut(s) 59
BseRI GAGGAG 1 cut(s) 83
BseXI GCAGC 1 cut(s) 96
Bsp143I GATC 1 cut(s) 37
Bsp19I CCATGG 1 cut(s) 63
BspMI ACCTGC 1 cut(s) 39
BspPI GGATC 1 cut(s) 32
BssECI CCNNGG 1 cut(s) 63
BssMI GATC 1 cut(s) 37
BssT1I CCWWGG 1 cut(s) 63
Bst6I CTCTTC 1 cut(s) 68
BstDSI CCRYGG 1 cut(s) 63
BstF5I GGATG 1 cut(s) 59
BstKTI GATC 1 cut(s) 40
BstMBI GATC 1 cut(s) 37
BstV1I GCAGC 1 cut(s) 96
BtgI CCRYGG 1 cut(s) 63
BtsCI GGATG 1 cut(s) 59
BveI ACCTGC 1 cut(s) 39
CviAII CATG 3 cut(s) 32, 64, 93
CviJI RGCY 1 cut(s) 109
CviKI_1 RGCY 1 cut(s) 109
DpnI GATC 1 cut(s) 39
DpnII GATC 1 cut(s) 37
DraIII CACNNNGTG 1 cut(s) 133
Eam1104I CTCTTC 1 cut(s) 68
EarI CTCTTC 1 cut(s) 68
Eco130I CCWWGG 1 cut(s) 63
Eco32I GATATC 1 cut(s) 90
EcoRV GATATC 1 cut(s) 90
EcoT14I CCWWGG 1 cut(s) 63
ErhI CCWWGG 1 cut(s) 63
FaeI CATG 3 cut(s) 35, 67, 96
FaiI YATR 3 cut(s) 33, 65, 94
FatI CATG 3 cut(s) 31, 63, 92
FblI GTMKAC 1 cut(s) 6
Fnu4HI GCNGC 1 cut(s) 110
FokI GGATG 1 cut(s) 46
Fsp4HI GCNGC 1 cut(s) 110
FspBI CTAG 1 cut(s) 98
GluI GCNGC 1 cut(s) 110
Hin1II CATG 3 cut(s) 35, 67, 96
Hpy166II GTNNAC 1 cut(s) 7
Hpy8I GTNNAC 1 cut(s) 7
HpyCH4V TGCA 1 cut(s) 85
Hsp92II CATG 3 cut(s) 35, 67, 96
Kzo9I GATC 1 cut(s) 37
LpnPI CCDG 2 cut(s) 29, 34
Lsp1109I GCAGC 1 cut(s) 96
MaeI CTAG 1 cut(s) 98
MalI GATC 1 cut(s) 39
MboI GATC 1 cut(s) 37
MboII GAAGA 1 cut(s) 85
MluCI AATT 3 cut(s) 80, 101, 114
MnlI CCTC 3 cut(s) 51, 61, 69
MseI TTAA 1 cut(s) 104
NcoI CCATGG 1 cut(s) 63
NdeII GATC 1 cut(s) 37
NlaIII CATG 3 cut(s) 35, 67, 96
PkrI GCNGC 1 cut(s) 111
SaqAI TTAA 1 cut(s) 104
SatI GCNGC 1 cut(s) 110
Sau3AI GATC 1 cut(s) 37
SetI ASST 1 cut(s) 53
SgeI CNNG 6 cut(s) 44, 56, 61, 76, 105, 110
Sse9I AATT 3 cut(s) 80, 101, 114
SspMI CTAG 1 cut(s) 98
StyI CCWWGG 1 cut(s) 63
TasI AATT 3 cut(s) 80, 101, 114
Tru1I TTAA 1 cut(s) 104
Tru9I TTAA 1 cut(s) 104
TseI GCWGC 1 cut(s) 109
XmiI GTMKAC 1 cut(s) 6
XspI CTAG 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.