No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0348771 RchiOBHm_Chr2g0140831 RchiOBHm_Chr4g0411461 RchiOBHm_Chr5g0081791 RchiOBHm_Chr7g0243031 |
| rosa_multiflora | Rmu_sc0004156.1_g000006 Rmu_sc0022366.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00134700 Rroxscaffold_5G00343820 |
| rosa_rugosa | Rorug05G0278500 |
| rosa_samantha | Rh2BG267600 Rh2BG426500 Rh2CG317800 Rh4CG254600 Rh5CG339000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 143 |
| AcsI | RAATTY | 1 cut(s) | 280 |
| AcuI | CTGAAG | 1 cut(s) | 21 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 40, 143 |
| AgsI | TTSAA | 1 cut(s) | 280 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 87 |
| AluBI | AGCT | 2 cut(s) | 311, 320 |
| AluI | AGCT | 2 cut(s) | 311, 320 |
| AoxI | GGCC | 1 cut(s) | 94 |
| ApeKI | GCWGC | 2 cut(s) | 30, 62 |
| ApoI | RAATTY | 1 cut(s) | 280 |
| AsuNHI | GCTAGC | 1 cut(s) | 307 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 19, 51 |
| BbvI | GCAGC | 2 cut(s) | 42, 74 |
| BccI | CCATC | 1 cut(s) | 145 |
| BfaI | CTAG | 2 cut(s) | 242, 308 |
| BisI | GCNGC | 2 cut(s) | 31, 63 |
| BlsI | GCNGC | 2 cut(s) | 32, 64 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 87 |
| BmtI | GCTAGC | 1 cut(s) | 311 |
| BpmI | CTGGAG | 1 cut(s) | 202 |
| BpuEI | CTTGAG | 1 cut(s) | 300 |
| BsaJI | CCNNGG | 1 cut(s) | 207 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 40, 143 |
| BseDI | CCNNGG | 1 cut(s) | 207 |
| BseGI | GGATG | 1 cut(s) | 203 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 40, 143 |
| BseRI | GAGGAG | 2 cut(s) | 227, 232 |
| BseXI | GCAGC | 2 cut(s) | 42, 74 |
| BsgI | GTGCAG | 1 cut(s) | 65 |
| BshFI | GGCC | 1 cut(s) | 96 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 40, 143 |
| BsnI | GGCC | 1 cut(s) | 96 |
| Bsp143I | GATC | 1 cut(s) | 185 |
| Bsp19I | CCATGG | 1 cut(s) | 207 |
| BspANI | GGCC | 1 cut(s) | 96 |
| BspOI | GCTAGC | 1 cut(s) | 311 |
| BssECI | CCNNGG | 1 cut(s) | 207 |
| BssMI | GATC | 1 cut(s) | 185 |
| BssT1I | CCWWGG | 1 cut(s) | 207 |
| Bst4CI | ACNGT | 1 cut(s) | 173 |
| BstC8I | GCNNGC | 3 cut(s) | 48, 297, 309 |
| BstDSI | CCRYGG | 1 cut(s) | 207 |
| BstF5I | GGATG | 1 cut(s) | 203 |
| BstKTI | GATC | 1 cut(s) | 188 |
| BstMBI | GATC | 1 cut(s) | 185 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 317 |
| BstNSI | RCATGY | 1 cut(s) | 299 |
| BstV1I | GCAGC | 2 cut(s) | 42, 74 |
| BsuRI | GGCC | 1 cut(s) | 96 |
| BtgI | CCRYGG | 1 cut(s) | 207 |
| BtsCI | GGATG | 1 cut(s) | 203 |
| Cac8I | GCNNGC | 3 cut(s) | 48, 297, 309 |
| CviAII | CATG | 3 cut(s) | 208, 237, 296 |
| CviJI | RGCY | 5 cut(s) | 33, 96, 307, 311, 320 |
| CviKI_1 | RGCY | 5 cut(s) | 33, 96, 307, 311, 320 |
| DpnI | GATC | 1 cut(s) | 187 |
| DpnII | GATC | 1 cut(s) | 185 |
| DriI | GACNNNNNGTC | 1 cut(s) | 87 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 87 |
| Eco130I | CCWWGG | 1 cut(s) | 207 |
| Eco57I | CTGAAG | 1 cut(s) | 21 |
| EcoT14I | CCWWGG | 1 cut(s) | 207 |
| ErhI | CCWWGG | 1 cut(s) | 207 |
| FaeI | CATG | 3 cut(s) | 211, 240, 299 |
| FatI | CATG | 3 cut(s) | 207, 236, 295 |
| Fnu4HI | GCNGC | 2 cut(s) | 31, 63 |
| FokI | GGATG | 1 cut(s) | 190 |
| Fsp4HI | GCNGC | 2 cut(s) | 31, 63 |
| FspBI | CTAG | 2 cut(s) | 242, 308 |
| GluI | GCNGC | 2 cut(s) | 31, 63 |
| GsuI | CTGGAG | 1 cut(s) | 202 |
| HaeIII | GGCC | 1 cut(s) | 96 |
| Hin1II | CATG | 3 cut(s) | 211, 240, 299 |
| HindIII | AAGCTT | 1 cut(s) | 318 |
| Hpy188I | TCNGA | 2 cut(s) | 40, 190 |
| Hpy188III | TCNNGA | 1 cut(s) | 181 |
| HpyAV | CCTTC | 1 cut(s) | 45 |
| HpyCH4III | ACNGT | 1 cut(s) | 173 |
| HpyCH4V | TGCA | 2 cut(s) | 46, 229 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 317 |
| Hsp92II | CATG | 3 cut(s) | 211, 240, 299 |
| Kzo9I | GATC | 1 cut(s) | 185 |
| LpnPI | CCDG | 2 cut(s) | 32, 166 |
| Lsp1109I | GCAGC | 2 cut(s) | 42, 74 |
| MaeI | CTAG | 2 cut(s) | 242, 308 |
| MaeIII | GTNAC | 1 cut(s) | 73 |
| MalI | GATC | 1 cut(s) | 187 |
| MboI | GATC | 1 cut(s) | 185 |
| MboII | GAAGA | 3 cut(s) | 20, 120, 169 |
| MfeI | CAATTG | 1 cut(s) | 258 |
| MluCI | AATT | 5 cut(s) | 224, 245, 258, 275, 280 |
| MnlI | CCTC | 4 cut(s) | 34, 205, 210, 213 |
| MseI | TTAA | 1 cut(s) | 248 |
| MunI | CAATTG | 1 cut(s) | 258 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 317 |
| NcoI | CCATGG | 1 cut(s) | 207 |
| NdeII | GATC | 1 cut(s) | 185 |
| NheI | GCTAGC | 1 cut(s) | 307 |
| NlaIII | CATG | 3 cut(s) | 211, 240, 299 |
| NmuCI | GTSAC | 1 cut(s) | 73 |
| NspI | RCATGY | 1 cut(s) | 299 |
| PaeI | GCATGC | 1 cut(s) | 299 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 143 |
| PkrI | GCNGC | 2 cut(s) | 32, 64 |
| SaqAI | TTAA | 1 cut(s) | 248 |
| SatI | GCNGC | 2 cut(s) | 31, 63 |
| Sau3AI | GATC | 1 cut(s) | 185 |
| SetI | ASST | 3 cut(s) | 45, 313, 322 |
| SmlI | CTYRAG | 1 cut(s) | 315 |
| SmoI | CTYRAG | 1 cut(s) | 315 |
| SphI | GCATGC | 1 cut(s) | 299 |
| Sse9I | AATT | 5 cut(s) | 224, 245, 258, 275, 280 |
| SspMI | CTAG | 2 cut(s) | 242, 308 |
| StyI | CCWWGG | 1 cut(s) | 207 |
| TaaI | ACNGT | 1 cut(s) | 173 |
| TasI | AATT | 5 cut(s) | 224, 245, 258, 275, 280 |
| Tru1I | TTAA | 1 cut(s) | 248 |
| Tru9I | TTAA | 1 cut(s) | 248 |
| TseFI | GTSAC | 1 cut(s) | 73 |
| TseI | GCWGC | 2 cut(s) | 30, 62 |
| Tsp45I | GTSAC | 1 cut(s) | 73 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 143 |
| XapI | RAATTY | 1 cut(s) | 280 |
| XceI | RCATGY | 1 cut(s) | 299 |
| XspI | CTAG | 2 cut(s) | 242, 308 |