RchiOBHm_Chr3g0454911

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
4804679 .. 4807730
3052 bp
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UTR
Exon/CDS
Intron
PRQ42190

Sequence Viewer

Length: 156 bp
ATGAGAACACAAAGGAATTGCAATATGGAGGACTGGGGCATAGATGGACAGGGAGATATGAAGTTCATTTATGGGACAAAGGGTCTTGGCATCCAACATAAAGGAATAAGGGAAAGAAAGTTTATCTGGGAGCTCATGGTGAAGAAGAATTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

51

Amino Acids

6.05

Weight (kDa)

9.65

Isoelectric Point (pI)

2.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 148
AhdI GACNNNNNGTC 1 cut(s) 81
AluBI AGCT 1 cut(s) 133
AluI AGCT 1 cut(s) 133
Alw21I GWGCWC 1 cut(s) 135
ApoI RAATTY 1 cut(s) 148
AsuHPI GGTGA 1 cut(s) 151
BanII GRGCYC 1 cut(s) 135
Bbv12I GWGCWC 1 cut(s) 135
BccI CCATC 1 cut(s) 38
BmeRI GACNNNNNGTC 1 cut(s) 81
BmrI ACTGGG 1 cut(s) 43
BmsI GCATC 1 cut(s) 99
BmuI ACTGGG 1 cut(s) 43
Bse1I ACTGG 1 cut(s) 38
BseGI GGATG 1 cut(s) 90
BseNI ACTGG 1 cut(s) 38
BsiHKAI GWGCWC 1 cut(s) 135
BslFI GGGAC 1 cut(s) 88
BsmFI GGGAC 1 cut(s) 88
Bsp1286I GDGCHC 1 cut(s) 135
BsrI ACTGG 1 cut(s) 38
BstF5I GGATG 1 cut(s) 90
BtsCI GGATG 1 cut(s) 90
CviAII CATG 1 cut(s) 136
CviJI RGCY 1 cut(s) 133
CviKI_1 RGCY 1 cut(s) 133
DriI GACNNNNNGTC 1 cut(s) 81
Eam1105I GACNNNNNGTC 1 cut(s) 81
Ecl136II GAGCTC 1 cut(s) 133
Eco24I GRGCYC 1 cut(s) 135
Eco53kI GAGCTC 1 cut(s) 133
EcoICRI GAGCTC 1 cut(s) 133
EcoRI GAATTC 1 cut(s) 148
EcoT38I GRGCYC 1 cut(s) 135
FaeI CATG 1 cut(s) 139
FaiI YATR 6 cut(s) 26, 41, 59, 72, 99, 137
FaqI GGGAC 1 cut(s) 88
FatI CATG 1 cut(s) 135
FokI GGATG 1 cut(s) 77
FriOI GRGCYC 1 cut(s) 135
Hin1II CATG 1 cut(s) 139
HphI GGTGA 1 cut(s) 151
HpyCH4V TGCA 1 cut(s) 21
Hsp92II CATG 1 cut(s) 139
LmnI GCTCC 1 cut(s) 130
LpnPI CCDG 3 cut(s) 19, 35, 112
LweI GCATC 1 cut(s) 99
MboII GAAGA 1 cut(s) 154
MhlI GDGCHC 1 cut(s) 135
MluCI AATT 2 cut(s) 16, 148
MmeI TCCRAC 1 cut(s) 118
MnlI CCTC 1 cut(s) 22
NlaIII CATG 1 cut(s) 139
Psp124BI GAGCTC 1 cut(s) 135
SacI GAGCTC 1 cut(s) 135
SduI GDGCHC 1 cut(s) 135
SetI ASST 1 cut(s) 135
SfaNI GCATC 1 cut(s) 99
SgeI CNNG 5 cut(s) 46, 62, 98, 139, 148
Sse9I AATT 2 cut(s) 16, 148
SstI GAGCTC 1 cut(s) 135
TasI AATT 2 cut(s) 16, 148
TspDTI ATGAA 2 cut(s) 55, 74
XapI RAATTY 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.