No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g09360 FvH4_5g09360 FvH4_5g09360 FvH4_5g09360 FvH4_5g09360 FvH4_6g42270 |
| rosa_chinensis | RchiOBHm_Chr3g0454911 |
| rosa_laevigata | RLG00000027153 |
| rosa_multiflora | Rmu_sc0000152.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00042560 Rroxscaffold_2G00122110 Rroxscaffold_4G00287830 Rroxscaffold_4G00287950 Rroxscaffold_4G00317020 |
| rosa_rugosa | Rorug01G0348400 Rorug04G0211500 |
| rosa_samantha | Rh1BG318800 Rh1CG311900 Rh4CG288500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 92 |
| AclI | AACGTT | 1 cut(s) | 135 |
| AclWI | GGATC | 1 cut(s) | 269 |
| AcsI | RAATTY | 1 cut(s) | 112 |
| AcyI | GRCGYC | 1 cut(s) | 93 |
| AgsI | TTSAA | 4 cut(s) | 26, 33, 102, 125 |
| AluBI | AGCT | 2 cut(s) | 29, 181 |
| AluI | AGCT | 2 cut(s) | 29, 181 |
| Alw26I | GTCTC | 1 cut(s) | 262 |
| AlwI | GGATC | 1 cut(s) | 269 |
| ApoI | RAATTY | 1 cut(s) | 112 |
| AspLEI | GCGC | 1 cut(s) | 95 |
| BanI | GGYRCC | 1 cut(s) | 92 |
| BccI | CCATC | 2 cut(s) | 155, 274 |
| BclI | TGATCA | 1 cut(s) | 294 |
| BcoDI | GTCTC | 1 cut(s) | 262 |
| BfoI | RGCGCY | 1 cut(s) | 96 |
| BmiI | GGNNCC | 1 cut(s) | 94 |
| BsaHI | GRCGYC | 1 cut(s) | 93 |
| BsaWI | WCCGGW | 1 cut(s) | 16 |
| BseGI | GGATG | 1 cut(s) | 25 |
| BseRI | GAGGAG | 1 cut(s) | 60 |
| BshNI | GGYRCC | 1 cut(s) | 92 |
| BsiSI | CCGG | 1 cut(s) | 17 |
| BsmAI | GTCTC | 1 cut(s) | 262 |
| Bsp143I | GATC | 3 cut(s) | 261, 286, 294 |
| BspLI | GGNNCC | 1 cut(s) | 94 |
| BspPI | GGATC | 1 cut(s) | 269 |
| BspQI | GCTCTTC | 2 cut(s) | 52, 120 |
| BspT107I | GGYRCC | 1 cut(s) | 92 |
| BssMI | GATC | 3 cut(s) | 261, 286, 294 |
| BssNI | GRCGYC | 1 cut(s) | 93 |
| Bst4CI | ACNGT | 1 cut(s) | 239 |
| Bst6I | CTCTTC | 4 cut(s) | 52, 78, 103, 120 |
| BstACI | GRCGYC | 1 cut(s) | 93 |
| BstC8I | GCNNGC | 1 cut(s) | 250 |
| BstF5I | GGATG | 1 cut(s) | 25 |
| BstH2I | RGCGCY | 1 cut(s) | 96 |
| BstHHI | GCGC | 1 cut(s) | 95 |
| BstKTI | GATC | 3 cut(s) | 264, 289, 297 |
| BstMAI | GTCTC | 1 cut(s) | 262 |
| BstMBI | GATC | 3 cut(s) | 261, 286, 294 |
| BtsCI | GGATG | 1 cut(s) | 25 |
| Cac8I | GCNNGC | 1 cut(s) | 250 |
| CfoI | GCGC | 1 cut(s) | 95 |
| CviJI | RGCY | 3 cut(s) | 29, 130, 181 |
| CviKI_1 | RGCY | 3 cut(s) | 29, 130, 181 |
| DinI | GGCGCC | 1 cut(s) | 94 |
| DpnI | GATC | 3 cut(s) | 263, 288, 296 |
| DpnII | GATC | 3 cut(s) | 261, 286, 294 |
| DraI | TTTAAA | 1 cut(s) | 117 |
| Eam1104I | CTCTTC | 4 cut(s) | 52, 78, 103, 120 |
| EarI | CTCTTC | 4 cut(s) | 52, 78, 103, 120 |
| EgeI | GGCGCC | 1 cut(s) | 94 |
| EheI | GGCGCC | 1 cut(s) | 94 |
| FaiI | YATR | 5 cut(s) | 148, 150, 158, 176, 189 |
| FbaI | TGATCA | 1 cut(s) | 294 |
| FokI | GGATG | 1 cut(s) | 32 |
| GlaI | GCGC | 1 cut(s) | 94 |
| HaeII | RGCGCY | 1 cut(s) | 96 |
| HapII | CCGG | 1 cut(s) | 17 |
| HhaI | GCGC | 1 cut(s) | 95 |
| Hin1I | GRCGYC | 1 cut(s) | 93 |
| Hin6I | GCGC | 1 cut(s) | 93 |
| HinP1I | GCGC | 1 cut(s) | 93 |
| HindIII | AAGCTT | 1 cut(s) | 27 |
| HinfI | GANTC | 1 cut(s) | 207 |
| HpaII | CCGG | 1 cut(s) | 17 |
| Hpy188III | TCNNGA | 1 cut(s) | 265 |
| HpyAV | CCTTC | 1 cut(s) | 219 |
| HpyCH4III | ACNGT | 1 cut(s) | 239 |
| HpyCH4IV | ACGT | 1 cut(s) | 135 |
| HpyCH4V | TGCA | 1 cut(s) | 152 |
| HpySE526I | ACGT | 1 cut(s) | 135 |
| Hsp92I | GRCGYC | 1 cut(s) | 93 |
| HspAI | GCGC | 1 cut(s) | 93 |
| KasI | GGCGCC | 1 cut(s) | 92 |
| Ksp22I | TGATCA | 1 cut(s) | 294 |
| Kzo9I | GATC | 3 cut(s) | 261, 286, 294 |
| LguI | GCTCTTC | 2 cut(s) | 52, 120 |
| LpnPI | CCDG | 5 cut(s) | 30, 100, 182, 244, 258 |
| MaeII | ACGT | 1 cut(s) | 135 |
| MalI | GATC | 3 cut(s) | 263, 288, 296 |
| MboI | GATC | 3 cut(s) | 261, 286, 294 |
| MboII | GAAGA | 6 cut(s) | 39, 49, 65, 90, 137, 234 |
| MluCI | AATT | 2 cut(s) | 112, 143 |
| Mly113I | GGCGCC | 1 cut(s) | 93 |
| MmeI | TCCRAC | 1 cut(s) | 235 |
| MnlI | CCTC | 3 cut(s) | 61, 81, 106 |
| MseI | TTAA | 2 cut(s) | 116, 138 |
| MspI | CCGG | 1 cut(s) | 17 |
| NarI | GGCGCC | 1 cut(s) | 93 |
| NdeII | GATC | 3 cut(s) | 261, 286, 294 |
| NlaIV | GGNNCC | 1 cut(s) | 94 |
| PciSI | GCTCTTC | 2 cut(s) | 52, 120 |
| PfeI | GAWTC | 1 cut(s) | 207 |
| PluTI | GGCGCC | 1 cut(s) | 96 |
| Psp1406I | AACGTT | 1 cut(s) | 135 |
| PspN4I | GGNNCC | 1 cut(s) | 94 |
| SapI | GCTCTTC | 2 cut(s) | 52, 120 |
| SaqAI | TTAA | 2 cut(s) | 116, 138 |
| Sau3AI | GATC | 3 cut(s) | 261, 286, 294 |
| SetI | ASST | 3 cut(s) | 31, 138, 183 |
| SfoI | GGCGCC | 1 cut(s) | 94 |
| SmiI | ATTTAAAT | 1 cut(s) | 117 |
| Sse9I | AATT | 2 cut(s) | 112, 143 |
| SspDI | GGCGCC | 1 cut(s) | 92 |
| SwaI | ATTTAAAT | 1 cut(s) | 117 |
| TaaI | ACNGT | 1 cut(s) | 239 |
| TaiI | ACGT | 1 cut(s) | 138 |
| TaqI | TCGA | 1 cut(s) | 264 |
| TasI | AATT | 2 cut(s) | 112, 143 |
| TfiI | GAWTC | 1 cut(s) | 207 |
| Tru1I | TTAA | 2 cut(s) | 116, 138 |
| Tru9I | TTAA | 2 cut(s) | 116, 138 |
| TspDTI | ATGAA | 1 cut(s) | 191 |
| XapI | RAATTY | 1 cut(s) | 112 |