Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003497

Physical Location & Seq

Genomic Coordinates Reverse (-)

15942874 .. 15949900

Gene Structure 7027 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ43581

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3417 bp

ATGGGGAGCTCCAGAGTGAGGATCAGAGCCCGTTGGTTTCCCCATGTTGTGTTCATCGTCGTTTTGAGATTGTTGCCGTGCTTTTTGTGCCAGGACGAAGATGATTTCAGTAAGAACAAAAACCCGGCCACGCTTCCTCTTGTTACTCAGCTCTTGGAGAGCAAGCTTTCAAATCTCACCAAGTATTTAAGCAAAGACCTTAGAGGTCATATGGAGTACTGCATTAAGAATGTGGAAGATGATTGGAATGGAGCATTCAATTATACGGGGAGGCTTGAATTCCTGTCTAATTGTATAAAAAACTCGAAAGGTTTGATACTAACAGGAGAAGTCAGTAGTCGAATATGTACAGCAGCGGAAATGAGGTACTATTTCTCGAGTTTCACTAACATTGGGATCACTGACGATGGGGTACCGCATCAGTTAACCTACTTGAAACCAAACCTGAACTGCAACTTGACCAATTGGGAAGCCGGATGCGAACCTGGTTGGGGTTGTAGTCTTGATGGTGAGGACAAGGTTGACCTCAAAGTTTCACACATTCCTGCTAGAACCACAGATTGTCAGCCTTGTTGTGAAGGTTTTTTCTGCCCTGAGGGAATCACTTGCATGATCCATATTGTATGTGATGATATCGAATCAAACCTAATACCTCCTTTTCTTTTAAATGAAGCTTGTCCTTTAGGTGCTTACTGTCCCCGTGCAAAACTAAACCAAACGAGTGGATTATGTGACCCATATACTTACCAAGTACCTGCAGGAGAACCAAATCATACTTGTGGTGGTGCAGATGTTTGGACTGATGCGAGTAAAACTGATGTATTTTGTTCATCTGGTTCATACTGCCCCACTACCATAAAGAAATACACTTGCAGTAGTGGATTTTACTGCAGGATGGGTTCCACATATCAAAAACCATGCTTGAAGTTGACTGACTGTGGTCGAGGTACTGCAAATCAAAAGATTCATGCATACGGGATCTTCCTTGTTGTTGCACTGAGTTTTATTTTGATCATAATTTATAACTGCTCTGATCAAGTTCTGCTGATTCGGGAAAGAAAAGCAGCTAAGTCTAGGGAAGCTGCAGCAAGACATGCACGAGAAACTGCACAAGCACGCGAAAGATGGAAAGCTGCAAAAGAAGGCCTTAAGAAGCGTAAAGTGGGATTGCAAGAGCAGATGTCCCGCACATTTTCTCGCAAAAAATCTACAAGGAATTCAGAGCCTCTGAAGATTTCAGGTCATCTTAAACCTGGTACAGATCATACTTCAACAGCACCTAAGATACCTGGTACATTAAGCTCATCTGAGCAATTATCACCAGCTTCAAAATCAAAGAATAAGGAACCAAGCAACCTTACCCAAATGTTGCAATCCCTAGACGATGATCCGCATAGTACTGAAGGCTTTAATCTTCAGATTGGTGATAAAAATATTAAAAGGCAAGCCCCAAAAGTTAAAAATCTGCATACTCACAGTCAAATTTTTAAGTATGCATATGGTCAACTCGAGAAGGAGAAAGCTATGCAACAAGAAAGCAAGAACTTGACCTTTACGGGTATAATCCAAATGGCCAAGGACACTGAGGTCAAGACTCGCCCTGCGATCGAAGTAGATTTTAAAGATTTAACTCTCACTCTGAAAGGAAAAGATAAAAATCTTTTGAGGAGTGTTACTGGAAAACTTTTTCCTGGTCGAGTTTCAGCAGTCATGGGCCCTTCAGGAGCTGGGAAAACAACATTTCTGTCTGCATTATCAGGAAAAGTAACTGGATGCACTGTGACAGGTTCAATTCTAATAAATGGAAAAGCTGAACCAATGACTGCCTACAAGAGAATCATTGGCTTTGTGCCTCAAGACGATGTTGTGCATGGAAACTTGACTGTGGAGGAGAATCTCCGATTTAGTGCAAGGTGCAGACTGTCTGCCAACATGCCAAAACCTGATAAAGTCCTGGTTGTTGAAAGAGTTATTGAGGCTCTGGGACTAGGGGCAGTGAGAGATTCCGTGGTTGGTACTGTGGAGAAGCGTGGAATCTCTGGAGGGCAAAGGAAACGTGTTAATGTTGGGTTAGAGATGGTCATGGAACCTTCATTGCTGATCTTGGATGAGCCTACGACGGGTTTGGACAGTGCATCTTCCCAGTTACTTCTTAAAGCCCTTCGACGTGAAGCTCGTGAAGGGGTAAACATCTGTATGGTACTTCACCAGCCAAGCTATTCCTTATTCAGGATGTTTGATGATTTCATTCTTTTAGCCAAAGGTGGTCTTACTGTATATCATGGATCTGTAAAGAAAGTTGAAGAGTATTTTGCTGGCATCGGGATTGTTGTACCAGAACGTGTTAATCCTCCGGACTACTTCATTGACATTTTGGAAGGTATAGTGAAACCAAGCTCAGGTGTGAATCATGAAGAACTTCCAGTTAGATGGATGCTACATAATGGGTACCCAGTACCTCAAGATATGATGCACTATCTAGATGGAATTGCTGCAAGCTCAGCGGGCCCAAAACCTGTAATGAGGAGAGATCAATCTTTTGCTGGAGATTTGTGGCGGGATGTGAAGACTAATGTTGAGGTGAAAAAAGATCACTTAAGACATAACTTCCTAGTGTCCCAGGATTTATCAGACCGAATTACTCCTGGTATCTTCCGGCAGTACAGATATTACCTAGGGAGGTATAAGGTAGGTAAGCAGCGGCTACGAGACGCTCAAATGCTGGCAGCGGATTATCTGATTATGTTACTTGCCGGAGCCATCTTAGGGATTTTTTCAAAAATGAATGATGAAACATTTGGTTTCAACGGCTACACTTATACTGTCATTGCTGTTTCACTACTTTGCAAAATATCAGCATTGAGAACCTTCTCTCTTGACAAATTACACTACTGGAGAGAGAGTGCATCTGGGATCAGCAGTCTGGCTCATTTTCTATCCAAAGATACAATGGACCATTTCAATACAGTCATCAAACCTTTGGTGTATCTATCCACATTCTATTTCTTTAGCAACCCAAGGTCATCGTTTCAAGACAATTACATTGTTTTGCTCTGCCTTGTGTACTGTACGACTGGCATAGGTTACGCACTTGCCATCTACCTTGACCCGAGTCCGGCCCAACTGAGCTCAGTGCTTCTTCCGGTTGTATTGACCCTCATTGCAACCCAAGCTAAAGACAGTAAAATTGCAGGGCATGTAGCCAAGTTTTGCTACACAAAGTGGGCACTAGAAGCTTTTGTTATTGCAAATGCCGAAAGGTACTCTGGGGTGTGGCTGATCAGTCGCTGCACGGCATTATATAGAAGAGGCTATGACCTTAATGATTGGACCCTCTGTCTGGTCACCCTCGTGGTGATCGGTCTACTTACTCGTATCTTGGCTTTCATTCTGTTGTTGATAACTCAAAAGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0008150 GO:0009506 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran

Protein Analysis

1138

Amino Acids

126.79

Weight (kDa)

9.0

Isoelectric Point (pI)

36.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	555 - 707	6.4e-24	ABC transporter
ABC2_membrane_7	PF19055	736 - 1138	1.4e-210	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003497)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37010 AT2G37010
fragaria_vesca	FvH4_6g16150 FvH4_6g16150 FvH4_6g16150 FvH4_6g16150 FvH4_6g16150 FvH4_6g16150 FvH4_6g16150 FvH4_6g16150
malus_domestica	MD12G1115400.v1.1
prunus_persica	Prupe.6G234500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0469991
rosa_laevigata	RLG00000024306
rosa_multiflora	Rmu_sc0000831.1_g000026 Rmu_sc0003342.1_g000004 Rmu_sc0007963.1_g000003 Rmu_sc0008347.1_g000006 Rmu_sc0020091.1_g000002 Rmu_ssc0000397.1_g000046
rosa_roxburghii	Rroxscaffold_6G00411310
rosa_rugosa	Rorug03G0105900 Rorug03G0105900
rosa_samantha	Rh1AG175800 Rh1CG163700 Rh2BG425000 Rh3AG155000 Rh3BG179100 Rh3CG169700 Rh3DG196100 Rh4CG158900 Rh5AG391600 Rh5CG032200 Rh7CG425900
rosa_wichuraiana	Rw3G014600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1023
AasI	GACNNNNNNGTC	1 cut(s)	1586
Acc36I	ACCTGC	1 cut(s)	763
Acc65I	GGTACC	2 cut(s)	412, 2448
AccB1I	GGYRCC	2 cut(s)	412, 2448
AccI	GTMKAC	1 cut(s)	3364
AccII	CGCG	1 cut(s)	1119
AccIII	TCCGGA	1 cut(s)	2353
AciI	CCGC	8 cut(s)	356, 416, 1186, 1391, 2504, 2557, 2701, 2729
AclWI	GGATC	7 cut(s)	29, 404, 607, 986, 1382, 2293, 2921
AcoI	YGGCCR	2 cut(s)	126, 1572
AcsI	RAATTY	3 cut(s)	278, 1216, 1482
AcuI	CTGAAG	4 cut(s)	1250, 1400, 1422, 1704
AdeI	CACNNNGTG	1 cut(s)	3222
AfiI	CCNNNNNNNGG	8 cut(s)	18, 491, 2120, 2229, 2399, 2766, 3115, 3340
AflII	CTTAAG	2 cut(s)	1148, 2596
AflIII	ACRYGT	2 cut(s)	2056, 2341
AhdI	GACNNNNNGTC	1 cut(s)	3336
AjiI	CACGTC	1 cut(s)	2168
AjnI	CCWGG	8 cut(s)	90, 484, 1252, 1288, 1690, 1953, 2619, 2644
AleI	CACNNNNGTG	1 cut(s)	3350
Alw21I	GWGCWC	2 cut(s)	11, 3131
Alw26I	GTCTC	1 cut(s)	2703
AlwI	GGATC	7 cut(s)	29, 404, 607, 986, 1382, 2293, 2921
AlwNI	CAGNNNCTG	2 cut(s)	1727, 3288
Ama87I	CYCGRG	3 cut(s)	376, 1508, 3109
Aor13HI	TCCGGA	1 cut(s)	2353
AoxI	GGCC	6 cut(s)	126, 1144, 1572, 1714, 2506, 3117
ApaI	GGGCCC	2 cut(s)	1718, 2510
ApeKI	GCWGC	9 cut(s)	353, 1064, 1082, 1085, 1133, 2492, 2698, 2726, 3288
ApoI	RAATTY	3 cut(s)	278, 1216, 1482
Asp700I	GAANNNNTTC	1 cut(s)	2418
Asp718I	GGTACC	2 cut(s)	412, 2448
AspA2I	CCTAGG	1 cut(s)	2674
AspS9I	GGNCC	7 cut(s)	1714, 1715, 2506, 2507, 2953, 3118, 3330
AsuC2I	CCSGG	1 cut(s)	125
AsuHPI	GGTGA	8 cut(s)	169, 521, 1311, 1436, 2198, 2593, 3337, 3367
AvaI	CYCGRG	3 cut(s)	376, 1508, 3109
AvaII	GGWCC	2 cut(s)	2953, 3330
AvrII	CCTAGG	1 cut(s)	2674
AxyI	CCTNAGG	1 cut(s)	594
BaeGI	GKGCMC	3 cut(s)	1718, 2510, 3229
BalI	TGGCCA	1 cut(s)	1574
BanI	GGYRCC	2 cut(s)	412, 2448
BanII	GRGCYC	5 cut(s)	11, 31, 1718, 2510, 3131
BauI	CACGAG	3 cut(s)	1098, 2175, 3350
BbsI	GAAGAC	1 cut(s)	2573
Bbv12I	GWGCWC	2 cut(s)	11, 3131
BbvI	GCAGC	9 cut(s)	365, 1069, 1076, 1097, 1120, 2479, 2710, 2738, 3275
BccI	CCATC	9 cut(s)	401, 500, 889, 1119, 2071, 2424, 2477, 2768, 3104
BceAI	ACGGC	3 cut(s)	61, 2824, 3309
BciT130I	CCWGG	8 cut(s)	92, 486, 1254, 1290, 1692, 1955, 2621, 2646
BclI	TGATCA	3 cut(s)	1011, 1033, 3279
BcnI	CCSGG	1 cut(s)	125
BcoDI	GTCTC	1 cut(s)	2703
BfaI	CTAG	8 cut(s)	549, 1074, 1379, 1988, 2480, 2612, 2675, 3230
BfmI	CTRYAG	3 cut(s)	756, 889, 1083
BfrI	CTTAAG	2 cut(s)	1148, 2596
BfuAI	ACCTGC	1 cut(s)	763
BlnI	CCTAGG	1 cut(s)	2674
BlpI	GCTNAGC	1 cut(s)	2500
BmcAI	AGTACT	2 cut(s)	218, 1399
Bme1390I	CCNGG	9 cut(s)	92, 125, 486, 1254, 1290, 1692, 1955, 2621, 2646
Bme18I	GGWCC	2 cut(s)	2953, 3330
BmeRI	GACNNNNNGTC	1 cut(s)	3336
BmeT110I	CYCGRG	3 cut(s)	376, 1508, 3109
BmgBI	CACGTC	1 cut(s)	2168
BmgT120I	GGNCC	7 cut(s)	1714, 1715, 2506, 2507, 2953, 3118, 3330
BmiI	GGNNCC	9 cut(s)	414, 901, 1347, 1716, 2088, 2450, 2508, 2758, 3332
BmrFI	CCNGG	9 cut(s)	92, 125, 486, 1254, 1290, 1692, 1955, 2621, 2646
BmrI	ACTGGG	2 cut(s)	2137, 2447
BmsI	GCATC	9 cut(s)	427, 467, 793, 1763, 2144, 2328, 2424, 2460, 2915
BmuI	ACTGGG	2 cut(s)	2137, 2447
BoxI	GACNNNNGTC	2 cut(s)	939, 3111
BpiI	GAAGAC	1 cut(s)	2573
BpmI	CTGGAG	3 cut(s)	2061, 2565, 2914
Bpu10I	CCTNAGC	1 cut(s)	2398
Bpu1102I	GCTNAGC	1 cut(s)	2500
BpuEI	CTTGAG	2 cut(s)	1839, 2445
BpuMI	CCSGG	1 cut(s)	125
BsaBI	GATNNNNATC	1 cut(s)	1656
BsaJI	CCNNGG	5 cut(s)	1575, 2007, 2619, 2674, 3017
BsaWI	WCCGGW	2 cut(s)	2353, 3142
BsaXI	ACNNNNNCTCC	2 cut(s)	2887, 2917
Bsc4I	CCNNNNNNNGG	8 cut(s)	18, 491, 2120, 2229, 2399, 2766, 3115, 3340
Bse1I	ACTGG	7 cut(s)	1681, 1774, 2143, 2423, 2453, 2897, 3079
Bse21I	CCTNAGG	1 cut(s)	594
Bse3DI	GCAATG	3 cut(s)	2093, 2826, 3159
Bse8I	GATNNNNATC	1 cut(s)	1656
BseAI	TCCGGA	1 cut(s)	2353
BseBI	CCWGG	8 cut(s)	92, 486, 1254, 1290, 1692, 1955, 2621, 2646
BseDI	CCNNGG	5 cut(s)	1575, 2007, 2619, 2674, 3017
BseGI	GGATG	7 cut(s)	482, 900, 1778, 2113, 2238, 2439, 2566
BseJI	GATNNNNATC	1 cut(s)	1656
BseLI	CCNNNNNNNGG	8 cut(s)	18, 491, 2120, 2229, 2399, 2766, 3115, 3340
BseMI	GCAATG	3 cut(s)	2093, 2826, 3159
BseMII	CTCAG	9 cut(s)	161, 585, 989, 1299, 1575, 2412, 2514, 3116, 3144
BseNI	ACTGG	7 cut(s)	1681, 1774, 2143, 2423, 2453, 2897, 3079
BseRI	GAGGAG	3 cut(s)	1681, 1904, 2539
BseSI	GKGCMC	3 cut(s)	1718, 2510, 3229
BseXI	GCAGC	9 cut(s)	365, 1069, 1076, 1097, 1120, 2479, 2710, 2738, 3275
BseYI	CCCAGC	1 cut(s)	1727
BsgI	GTGCAG	4 cut(s)	807, 1092, 1936, 3274
Bsh1236I	CGCG	1 cut(s)	1119
Bsh1285I	CGRYCG	1 cut(s)	1608
BshFI	GGCC	6 cut(s)	128, 1146, 1574, 1716, 2508, 3119
BshNI	GGYRCC	2 cut(s)	412, 2448
BsiEI	CGRYCG	1 cut(s)	1608
BsiHKAI	GWGCWC	2 cut(s)	11, 3131
BsiHKCI	CYCGRG	3 cut(s)	376, 1508, 3109
BsiSI	CCGG	7 cut(s)	125, 474, 2354, 2656, 2754, 3116, 3143
BslFI	GGGAC	4 cut(s)	681, 1168, 1998, 2602
BslI	CCNNNNNNNGG	8 cut(s)	18, 491, 2120, 2229, 2399, 2766, 3115, 3340
BsmAI	GTCTC	1 cut(s)	2703
BsmBI	CGTCTC	1 cut(s)	2703
BsmFI	GGGAC	4 cut(s)	681, 1168, 1998, 2602
BsmI	GAATGC	1 cut(s)	254
BsnI	GGCC	6 cut(s)	128, 1146, 1574, 1716, 2508, 3119
BsoBI	CYCGRG	3 cut(s)	376, 1508, 3109
Bsp120I	GGGCCC	2 cut(s)	1714, 2506
Bsp1286I	GDGCHC	6 cut(s)	11, 31, 1718, 2510, 3131, 3229
Bsp13I	TCCGGA	1 cut(s)	2353
Bsp1407I	TGTACA	1 cut(s)	347
Bsp1720I	GCTNAGC	1 cut(s)	2500
BspACI	CCGC	8 cut(s)	356, 416, 1186, 1391, 2504, 2557, 2701, 2729
BspANI	GGCC	6 cut(s)	128, 1146, 1574, 1716, 2508, 3119
BspCNI	CTCAG	9 cut(s)	160, 586, 990, 1300, 1576, 2411, 2513, 3117, 3143
BspEI	TCCGGA	1 cut(s)	2353
BspFNI	CGCG	1 cut(s)	1119
BspHI	TCATGA	1 cut(s)	2410
BspLI	GGNNCC	9 cut(s)	414, 901, 1347, 1716, 2088, 2450, 2508, 2758, 3332
BspMAI	CTGCAG	3 cut(s)	760, 893, 1087
BspMI	ACCTGC	1 cut(s)	763
BspPI	GGATC	7 cut(s)	29, 404, 607, 986, 1382, 2293, 2921
BspT107I	GGYRCC	2 cut(s)	412, 2448
BspTI	CTTAAG	2 cut(s)	1148, 2596
BsrDI	GCAATG	3 cut(s)	2093, 2826, 3159
BsrGI	TGTACA	1 cut(s)	347
BsrI	ACTGG	7 cut(s)	1681, 1774, 2143, 2423, 2453, 2897, 3079
BssECI	CCNNGG	5 cut(s)	1575, 2007, 2619, 2674, 3017
BssSI	CACGAG	3 cut(s)	1098, 2175, 3350
BssT1I	CCWWGG	3 cut(s)	1575, 2674, 3017
Bst2BI	CACGAG	3 cut(s)	1098, 2175, 3350
Bst2UI	CCWGG	8 cut(s)	92, 486, 1254, 1290, 1692, 1955, 2621, 2646
Bst6I	CTCTTC	2 cut(s)	2298, 3301
BstAFI	CTTAAG	2 cut(s)	1148, 2596
BstAPI	GCANNNNNTGC	1 cut(s)	1094
BstAUI	TGTACA	1 cut(s)	347
BstC8I	GCNNGC	7 cut(s)	164, 1117, 1446, 2317, 2497, 2506, 2724
BstDSI	CCRYGG	1 cut(s)	2007
BstEII	GGTNACC	1 cut(s)	3343
BstENI	CCTNNNNNAGG	1 cut(s)	2227
BstF5I	GGATG	7 cut(s)	482, 900, 1778, 2113, 2238, 2439, 2566
BstFNI	CGCG	1 cut(s)	1119
BstMAI	GTCTC	1 cut(s)	2703
BstMCI	CGRYCG	1 cut(s)	1608
BstMWI	GCNNNNNNNGC	6 cut(s)	87, 1094, 2501, 2505, 3170, 3233
BstNI	CCWGG	8 cut(s)	92, 486, 1254, 1290, 1692, 1955, 2621, 2646
BstNSI	RCATGY	3 cut(s)	1097, 1936, 3200
BstPAI	GACNNNNGTC	2 cut(s)	939, 3111
BstPI	GGTNACC	1 cut(s)	3343
BstSCI	CCNGG	9 cut(s)	90, 123, 484, 1252, 1288, 1690, 1953, 2619, 2644
BstSFI	CTRYAG	3 cut(s)	756, 889, 1083
BstSLI	GKGCMC	3 cut(s)	1718, 2510, 3229
BstUI	CGCG	1 cut(s)	1119
BstV1I	GCAGC	9 cut(s)	365, 1069, 1076, 1097, 1120, 2479, 2710, 2738, 3275
BstV2I	GAAGAC	1 cut(s)	2573
BstX2I	RGATCY	2 cut(s)	978, 2285
BstXI	CCANNNNNNTGG	2 cut(s)	722, 2430
BstYI	RGATCY	2 cut(s)	978, 2285
Bsu36I	CCTNAGG	1 cut(s)	594
BsuRI	GGCC	6 cut(s)	128, 1146, 1574, 1716, 2508, 3119
BtgI	CCRYGG	1 cut(s)	2007
BtrI	CACGTC	1 cut(s)	2168
BtsCI	GGATG	7 cut(s)	482, 900, 1778, 2113, 2238, 2439, 2566
BtsI	GCAGTG	1 cut(s)	2001
BtsIMutI	CAGTG	7 cut(s)	399, 995, 1581, 1776, 2001, 2137, 3138
BveI	ACCTGC	1 cut(s)	763
Cac8I	GCNNGC	7 cut(s)	164, 1117, 1446, 2317, 2497, 2506, 2724
CaiI	CAGNNNCTG	2 cut(s)	1727, 3288
CciI	TCATGA	1 cut(s)	2410
Cfr13I	GGNCC	7 cut(s)	1714, 1715, 2506, 2507, 2953, 3118, 3330
CseI	GACGC	1 cut(s)	2720
CsiI	ACCWGGT	3 cut(s)	484, 1252, 1288
DraI	TTTAAA	2 cut(s)	666, 1621
DraIII	CACNNNGTG	1 cut(s)	3222
DrdI	GACNNNNNNGTC	1 cut(s)	1586
DriI	GACNNNNNGTC	1 cut(s)	3336
DseDI	GACNNNNNNGTC	1 cut(s)	1586
EaeI	YGGCCR	2 cut(s)	126, 1572
Eam1104I	CTCTTC	2 cut(s)	2298, 3301
Eam1105I	GACNNNNNGTC	1 cut(s)	3336
EarI	CTCTTC	2 cut(s)	2298, 3301
Ecl136II	GAGCTC	2 cut(s)	9, 3129
Eco130I	CCWWGG	3 cut(s)	1575, 2674, 3017
Eco147I	AGGCCT	1 cut(s)	1146
Eco24I	GRGCYC	5 cut(s)	11, 31, 1718, 2510, 3131
Eco32I	GATATC	1 cut(s)	634
Eco47I	GGWCC	2 cut(s)	2953, 3330
Eco53kI	GAGCTC	2 cut(s)	9, 3129
Eco57I	CTGAAG	4 cut(s)	1250, 1400, 1422, 1704
Eco81I	CCTNAGG	1 cut(s)	594
Eco88I	CYCGRG	3 cut(s)	376, 1508, 3109
Eco91I	GGTNACC	1 cut(s)	3343
EcoICRI	GAGCTC	2 cut(s)	9, 3129
EcoNI	CCTNNNNNAGG	1 cut(s)	2227
EcoO109I	RGGNCCY	1 cut(s)	1715
EcoO65I	GGTNACC	1 cut(s)	3343
EcoRI	GAATTC	2 cut(s)	278, 1216
EcoRII	CCWGG	8 cut(s)	90, 484, 1252, 1288, 1690, 1953, 2619, 2644
EcoRV	GATATC	1 cut(s)	634
EcoT14I	CCWWGG	3 cut(s)	1575, 2674, 3017
EcoT22I	ATGCAT	2 cut(s)	973, 1498
EcoT38I	GRGCYC	5 cut(s)	11, 31, 1718, 2510, 3131
ErhI	CCWWGG	3 cut(s)	1575, 2674, 3017
Esp3I	CGTCTC	1 cut(s)	2703
FalI	AAGNNNNNCTT	4 cut(s)	1131, 1163, 2253, 2285
FaqI	GGGAC	4 cut(s)	681, 1168, 1998, 2602
FauI	CCCGC	3 cut(s)	1193, 2497, 2550
FauNDI	CATATG	2 cut(s)	210, 1498
FbaI	TGATCA	3 cut(s)	1011, 1033, 3279
FblI	GTMKAC	1 cut(s)	3364
FokI	GGATG	7 cut(s)	489, 907, 1785, 2120, 2245, 2446, 2573
FriOI	GRGCYC	5 cut(s)	11, 31, 1718, 2510, 3131
FspBI	CTAG	8 cut(s)	549, 1074, 1379, 1988, 2480, 2612, 2675, 3230
GsaI	CCCAGC	1 cut(s)	1731
GsuI	CTGGAG	3 cut(s)	2061, 2565, 2914
HaeIII	GGCC	6 cut(s)	128, 1146, 1574, 1716, 2508, 3119
HapII	CCGG	7 cut(s)	125, 474, 2354, 2656, 2754, 3116, 3143
HgaI	GACGC	1 cut(s)	2720
HincII	GTYRAC	4 cut(s)	426, 523, 930, 1505
HindII	GTYRAC	4 cut(s)	426, 523, 930, 1505
HindIII	AAGCTT	3 cut(s)	164, 672, 3234
HpaI	GTTAAC	1 cut(s)	426
HpaII	CCGG	7 cut(s)	125, 474, 2354, 2656, 2754, 3116, 3143
HphI	GGTGA	8 cut(s)	169, 521, 1311, 1436, 2198, 2593, 3337, 3367
Hpy166II	GTNNAC	7 cut(s)	426, 523, 930, 1505, 2188, 3064, 3365
Hpy8I	GTNNAC	7 cut(s)	426, 523, 930, 1505, 2188, 3064, 3365
Hpy99I	CGWCG	3 cut(s)	62, 2122, 2169
HpyCH4IV	ACGT	3 cut(s)	2056, 2167, 2341
HpyF10VI	GCNNNNNNNGC	6 cut(s)	87, 1094, 2501, 2505, 3170, 3233
HpySE526I	ACGT	3 cut(s)	2056, 2167, 2341
Kpn2I	TCCGGA	1 cut(s)	2353
KpnI	GGTACC	2 cut(s)	416, 2452
Ksp22I	TGATCA	3 cut(s)	1011, 1033, 3279
KspAI	GTTAAC	1 cut(s)	426
LmnI	GCTCC	5 cut(s)	6, 14, 251, 1724, 2756
Lsp1109I	GCAGC	9 cut(s)	365, 1069, 1076, 1097, 1120, 2479, 2710, 2738, 3275
LweI	GCATC	9 cut(s)	427, 467, 793, 1763, 2144, 2328, 2424, 2460, 2915
MabI	ACCWGGT	3 cut(s)	484, 1252, 1288
MaeI	CTAG	8 cut(s)	549, 1074, 1379, 1988, 2480, 2612, 2675, 3230
MaeII	ACGT	3 cut(s)	2056, 2167, 2341
MaeIII	GTNAC	9 cut(s)	142, 731, 1672, 1765, 1780, 2145, 2745, 3083, 3343
MfeI	CAATTG	1 cut(s)	463
MflI	RGATCY	2 cut(s)	978, 2285
MhlI	GDGCHC	6 cut(s)	11, 31, 1718, 2510, 3131, 3229
MlsI	TGGCCA	1 cut(s)	1574
MluNI	TGGCCA	1 cut(s)	1574
MlyI	GAGTC	2 cut(s)	1588, 3121
Mox20I	TGGCCA	1 cut(s)	1574
Mph1103I	ATGCAT	2 cut(s)	973, 1498
MroI	TCCGGA	1 cut(s)	2353
MroXI	GAANNNNTTC	1 cut(s)	2418
MscI	TGGCCA	1 cut(s)	1574
MslI	CAYNNNNRTG	4 cut(s)	608, 777, 2195, 3350
Msp20I	TGGCCA	1 cut(s)	1574
MspA1I	CMGCKG	4 cut(s)	356, 2504, 2701, 2729
MspCI	CTTAAG	2 cut(s)	1148, 2596
MspI	CCGG	7 cut(s)	125, 474, 2354, 2656, 2754, 3116, 3143
MspR9I	CCNGG	9 cut(s)	92, 125, 486, 1254, 1290, 1692, 1955, 2621, 2646
MunI	CAATTG	1 cut(s)	463
Mva1269I	GAATGC	1 cut(s)	254
MvaI	CCWGG	8 cut(s)	92, 486, 1254, 1290, 1692, 1955, 2621, 2646
MvnI	CGCG	1 cut(s)	1119
MwoI	GCNNNNNNNGC	6 cut(s)	87, 1094, 2501, 2505, 3170, 3233
NciI	CCSGG	1 cut(s)	125
NdeI	CATATG	2 cut(s)	210, 1498
NlaIV	GGNNCC	9 cut(s)	414, 901, 1347, 1716, 2088, 2450, 2508, 2758, 3332
NmuCI	GTSAC	3 cut(s)	731, 1780, 3343
NsiI	ATGCAT	2 cut(s)	973, 1498
NspI	RCATGY	3 cut(s)	1097, 1936, 3200
OliI	CACNNNNGTG	1 cut(s)	3350
PaeR7I	CTCGAG	2 cut(s)	376, 1508
PagI	TCATGA	1 cut(s)	2410
PceI	AGGCCT	1 cut(s)	1146
PcsI	WCGNNNNNNNCGW	1 cut(s)	2173
PctI	GAATGC	1 cut(s)	254
PdmI	GAANNNNTTC	1 cut(s)	2418
PfeI	GAWTC	9 cut(s)	600, 638, 964, 1048, 1836, 1894, 2003, 2034, 2407
Ple19I	CGATCG	1 cut(s)	1608
PleI	GAGTC	2 cut(s)	1588, 3120
PpsI	GAGTC	2 cut(s)	1588, 3120
PshAI	GACNNNNGTC	2 cut(s)	939, 3111
PsiI	TTATAA	1 cut(s)	1023
Psp124BI	GAGCTC	2 cut(s)	11, 3131
Psp6I	CCWGG	8 cut(s)	90, 484, 1252, 1288, 1690, 1953, 2619, 2644
PspEI	GGTNACC	1 cut(s)	3343
PspFI	CCCAGC	1 cut(s)	1727
PspGI	CCWGG	8 cut(s)	90, 484, 1252, 1288, 1690, 1953, 2619, 2644
PspN4I	GGNNCC	9 cut(s)	414, 901, 1347, 1716, 2088, 2450, 2508, 2758, 3332
PspOMI	GGGCCC	2 cut(s)	1714, 2506
PspPI	GGNCC	7 cut(s)	1714, 1715, 2506, 2507, 2953, 3118, 3330
PstI	CTGCAG	3 cut(s)	760, 893, 1087
PstNI	CAGNNNCTG	2 cut(s)	1727, 3288
PsuI	RGATCY	2 cut(s)	978, 2285
PvuI	CGATCG	1 cut(s)	1608
RseI	CAYNNNNRTG	4 cut(s)	608, 777, 2195, 3350
SacI	GAGCTC	2 cut(s)	11, 3131
Sau96I	GGNCC	7 cut(s)	1714, 1715, 2506, 2507, 2953, 3118, 3330
SbfI	CCTGCAGG	1 cut(s)	760
ScaI	AGTACT	2 cut(s)	218, 1399
SchI	GAGTC	2 cut(s)	1588, 3121
ScrFI	CCNGG	9 cut(s)	92, 125, 486, 1254, 1290, 1692, 1955, 2621, 2646
SdaI	CCTGCAGG	1 cut(s)	760
SduI	GDGCHC	6 cut(s)	11, 31, 1718, 2510, 3131, 3229
SexAI	ACCWGGT	3 cut(s)	484, 1252, 1288
SfaNI	GCATC	9 cut(s)	427, 467, 793, 1763, 2144, 2328, 2424, 2460, 2915
SfcI	CTRYAG	3 cut(s)	756, 889, 1083
Sfr274I	CTCGAG	2 cut(s)	376, 1508
SinI	GGWCC	2 cut(s)	2953, 3330
SlaI	CTCGAG	2 cut(s)	376, 1508
SmiMI	CAYNNNNRTG	4 cut(s)	608, 777, 2195, 3350
SmlI	CTYRAG	6 cut(s)	376, 1148, 1508, 1854, 2460, 2596
SmoI	CTYRAG	6 cut(s)	376, 1148, 1508, 1854, 2460, 2596
Sse8387I	CCTGCAGG	1 cut(s)	760
SseBI	AGGCCT	1 cut(s)	1146
SsiI	CCGC	8 cut(s)	356, 416, 1186, 1391, 2504, 2557, 2701, 2729
SspI	AATATT	1 cut(s)	1435
SspMI	CTAG	8 cut(s)	549, 1074, 1379, 1988, 2480, 2612, 2675, 3230
SstI	GAGCTC	2 cut(s)	11, 3131
StuI	AGGCCT	1 cut(s)	1146
StyD4I	CCNGG	9 cut(s)	90, 123, 484, 1252, 1288, 1690, 1953, 2619, 2644
StyI	CCWWGG	3 cut(s)	1575, 2674, 3017
TaiI	ACGT	3 cut(s)	2059, 2170, 2344
TaqI	TCGA	9 cut(s)	305, 340, 377, 636, 943, 1509, 1608, 1696, 2164
TaqII	GACCGA	2 cut(s)	2649, 3350
TatI	WGTACW	5 cut(s)	216, 347, 1397, 2661, 3063
TauI	GCSGC	1 cut(s)	2704
TfiI	GAWTC	9 cut(s)	600, 638, 964, 1048, 1836, 1894, 2003, 2034, 2407
TscAI	CASTG	7 cut(s)	406, 1002, 1588, 1783, 2001, 2137, 3138
TseFI	GTSAC	3 cut(s)	731, 1780, 3343
TseI	GCWGC	9 cut(s)	353, 1064, 1082, 1085, 1133, 2492, 2698, 2726, 3288
Tsp45I	GTSAC	3 cut(s)	731, 1780, 3343
TspGWI	ACGGA	1 cut(s)	1996
TspRI	CASTG	7 cut(s)	406, 1002, 1588, 1783, 2001, 2137, 3138
Vha464I	CTTAAG	2 cut(s)	1148, 2596
VpaK11BI	GGWCC	2 cut(s)	2953, 3330
XagI	CCTNNNNNAGG	1 cut(s)	2227
XapI	RAATTY	3 cut(s)	278, 1216, 1482
XbaI	TCTAGA	1 cut(s)	2479
XceI	RCATGY	3 cut(s)	1097, 1936, 3200
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2947
XhoI	CTCGAG	2 cut(s)	376, 1508
XmaJI	CCTAGG	1 cut(s)	2674
XmiI	GTMKAC	1 cut(s)	3364
XmnI	GAANNNNTTC	1 cut(s)	2418
XspI	CTAG	8 cut(s)	549, 1074, 1379, 1988, 2480, 2612, 2675, 3230
ZrmI	AGTACT	2 cut(s)	218, 1399
Zsp2I	ATGCAT	2 cut(s)	973, 1498

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.