Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007963.1

Orthogroup ID

OG0003497

Physical Location & Seq

Genomic Coordinates Reverse (-)

10896 .. 18291

Gene Structure 7396 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007963.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3345 bp

atggccgcacatttctccccgccttttctttacaccaccaaattccggtcctccttcagaatccacacgctcccctctcccagctattgtcgttgctctccagccctcgccgcgtttcggccttcatcctccattgtttggctatcacgcaaccgcctgttgctccttgcaagcggagcatttgaattttcaccattctcaattgcattgtcgtcggagaaggggctcattactcgagttttgttttggtggtgtcgcatgcaagtgaggatcagagcccgttggtttccccatgttgtgttcatcgtcgttttgagattgttgccgtgctttttgtgtcaggacgaagatgatttcagtaagaacaaaaacccggccacgcttcctcttgttactcagctcttggagagcaagctttcaaatctcaccaagtatttaagcaaagaccttagaggtcatatggagtactgcattaagaatgtggaagatgattggaatggagcattcaattatacggggaggcttgaattcctgtctaattgtataaaaaactcgaaaggagaagtcagtagtcgaatatgtacagcagcggaaatgaggtactatttctcgagtttcactaacattgggatcactgacgatggggtaccgcatcagttaacctacttgaaaccaaacctgaactgcaacttgaccaattgggaagccggatgcgaacctggttggggttgtagtcttgatggtgaggacaaggttgacctcaaagtttcacacattcctgctagaaccactgattgtcagccttgttgtgaaggttttttctgccctgagggaatcacttgcatgatcccatgcttgaagttgactgactgtggtcgaggtactgcaaatcaaaagattcatgcatacgggatcttccttgttgttgcactgagttttattttgatcataatttataactgctctgatcaagttctgctgattcgggaaagaaaagcagctaagtctagggaagctgcagcaagacatgcacgagaaactgcacaagcacgcgaaagatggaaagctgcaaaagaaggccttaagaagcgtaaagtgggattgcaagagcagatgtcccgcacattttctcgcaaaaaatctacaaggaattcagagcctctgaagatttcaggtcatcttaaacctggtacagatcatacttcaacagcacctaagatacctggtacattaagctcatctgagcaattatcaccagcttcaaaatcaaagaataaggaaccaagcaaccttacccaaatgttgcaatccctagacgatgatccgcatagtactgaaggctttaatcttcagattggtgataaaaatattaaaaggcaagccccaaaagttaaaaatctgcatactcacagtcaaatttttaagtatgcatatggccaactcgagaaggagaaagctatgcaacaagaaagcaagaacttgacctttacgggtataatccaaatggccaaggacactgaggtcaagactcgccctgcgatcgaagtagattttaaagatttaactctcactctgaaaggaaaagataaaaatcttttgaggtgtgttactggaaaactttttcctggtcgagtttcagcagtcatgggcccttcaggagctgggaaaacaacatttctgtctgcattatcaggaaaagtaactggatgcactgtgacaggttcaattctaataaatggaaaagctgaaccaatgactgcctacaagagaatcattggctttgtgcctcaagacgatgttgtgcatggaaacttgactgtggaggagaatctccgatttagtgcaaggtgcagactgtctgccaacatgccaaaacctgataaagtcctggttgttgaaagagttattgaggctctgggactaggggcagtgagagattccgtggttggtactgtggagaaacgtggaatctctggagggcaacggaaacgtgttaatgttgggttagagatggtcatggaaccttcattgctgatcttggatgagcctacgacgggtttggacagtgcatcttcccagttacttcttaaagcccttcgacgtgaagctcgtgaaggggtaaacatctgtatggtacttcaccagccaagctattccctattcaggatgtttgatgatttcattcttttagccaaaggtggccttactgtatatcatggatctgtaaagaaagttgaagagtattttgctggcatcgggattgttgtaccagaacgtgttaatcctccggactacttcattgacattttggaaggtatagtgaaaccaagctcaggtgtgaatcatgaagaacttccagttagatggatgctacataatgggtacccagtgcctcaagatatgatgcactatctagatggaattgctgcaagctcagcaggcccaaaacctgtaatgaggagagatcaatcttttgctggagatttgtggcgggatgtgaagactaatgttgaggtgaaaaaagatcacttaagacataacttcctagtgtcccaggatttatcagaccgaattactcctggtatcttccggcagtacagatattacctagggagggtaggtaagcagcggcttcgagacgctcaaatgctggcagcggattatctgattatgttacttgccggagccatcttggggattttttcaaaaatgaatgatgaaacatttggtttcaacggctacacttatactgtcattgctgtttcactactttgcaaaatatcagcattgagaaccttctctcttgacaaattacactactggagagagagtgcatctgggatcagcagtctggctcattttctatccaaagatacaatggaccatttcaatacagtcatcaaacctttggtgtatctatccacattctatttctttagcaacccaaggtcatcgtttcaagacaattacattgttttgctctgccttgtgtactgtacgactggcataggttacgcacttgccatctaccttgacccgagtcctgcccaactgagctcagtgcttcttccggttgtattgaccctcattgcaacccaagctaaagacagtaaaattgcagggcatgtagccaagttttgctacacaaagtgggcactagaagcttttgttattgcaaatgccgaaaggtactctggggtgtggctgatcagtcgctgcacggcattatatagaagaggctatgaccttaatgattggaccctctgtctggtcaccctcgtggtgatcggtttacttactcgtatcttggctttcattctgttgttgataactcaaaagaggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0008150 GO:0009506 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran

Protein Analysis

1114

Amino Acids

124.68

Weight (kDa)

9.27

Isoelectric Point (pI)

38.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003497)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37010 AT2G37010
fragaria_vesca	FvH4_6g16150 FvH4_6g16150 FvH4_6g16150 FvH4_6g16150 FvH4_6g16150 FvH4_6g16150 FvH4_6g16150 FvH4_6g16150
malus_domestica	MD12G1115400.v1.1
prunus_persica	Prupe.6G234500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0469991
rosa_laevigata	RLG00000024306
rosa_multiflora	Rmu_sc0000831.1_g000026 Rmu_sc0003342.1_g000004 Rmu_sc0007963.1_g000003 Rmu_sc0008347.1_g000006 Rmu_sc0020091.1_g000002 Rmu_ssc0000397.1_g000046
rosa_roxburghii	Rroxscaffold_6G00411310
rosa_rugosa	Rorug03G0105900 Rorug03G0105900
rosa_samantha	Rh1AG175800 Rh1CG163700 Rh2BG425000 Rh3AG155000 Rh3BG179100 Rh3CG169700 Rh3DG196100 Rh4CG158900 Rh5AG391600 Rh5CG032200 Rh7CG425900
rosa_wichuraiana	Rw3G014600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	957
AasI	GACNNNNNNGTC	1 cut(s)	1520
Acc65I	GGTACC	2 cut(s)	646, 2382
AccB1I	GGYRCC	2 cut(s)	646, 2382
AccB7I	CCANNNNNTGG	1 cut(s)	138
AccII	CGCG	2 cut(s)	113, 1053
AccIII	TCCGGA	1 cut(s)	2287
AclWI	GGATC	7 cut(s)	278, 638, 841, 920, 1316, 2227, 2849
AcoI	YGGCCR	4 cut(s)	3, 375, 1435, 1506
AcsI	RAATTY	5 cut(s)	41, 185, 527, 1150, 1416
AcuI	CTGAAG	5 cut(s)	40, 1184, 1334, 1356, 1638
AdeI	CACNNNGTG	1 cut(s)	3150
AflII	CTTAAG	2 cut(s)	1082, 2530
AflIII	ACRYGT	2 cut(s)	1990, 2275
AhdI	GACNNNNNGTC	1 cut(s)	3264
AjiI	CACGTC	1 cut(s)	2102
AjnI	CCWGG	7 cut(s)	718, 1186, 1222, 1624, 1887, 2553, 2578
AleI	CACNNNNGTG	1 cut(s)	3278
Alw21I	GWGCWC	1 cut(s)	3059
Alw26I	GTCTC	1 cut(s)	2631
AlwI	GGATC	7 cut(s)	278, 638, 841, 920, 1316, 2227, 2849
AlwNI	CAGNNNCTG	2 cut(s)	1661, 3216
Ama87I	CYCGRG	4 cut(s)	234, 610, 1442, 3037
Aor13HI	TCCGGA	1 cut(s)	2287
AoxI	GGCC	9 cut(s)	3, 119, 375, 1078, 1435, 1506, 1648, 2200, 2440
ApaI	GGGCCC	1 cut(s)	1652
ApeKI	GCWGC	9 cut(s)	587, 998, 1016, 1019, 1067, 2426, 2626, 2654, 3216
ApoI	RAATTY	5 cut(s)	41, 185, 527, 1150, 1416
Asp700I	GAANNNNTTC	1 cut(s)	2352
Asp718I	GGTACC	2 cut(s)	646, 2382
AspA2I	CCTAGG	1 cut(s)	2608
AspS9I	GGNCC	6 cut(s)	48, 1648, 1649, 2441, 2881, 3258
AsuC2I	CCSGG	1 cut(s)	374
AsuHPI	GGTGA	9 cut(s)	183, 418, 755, 1245, 1370, 2132, 2527, 3265, 3295
AvaI	CYCGRG	4 cut(s)	234, 610, 1442, 3037
AvaII	GGWCC	3 cut(s)	48, 2881, 3258
AvrII	CCTAGG	1 cut(s)	2608
AxyI	CCTNAGG	1 cut(s)	828
BaeGI	GKGCMC	2 cut(s)	1652, 3157
BalI	TGGCCA	2 cut(s)	1437, 1508
BanI	GGYRCC	2 cut(s)	646, 2382
BanII	GRGCYC	4 cut(s)	228, 280, 1652, 3059
BauI	CACGAG	3 cut(s)	1032, 2109, 3278
BbsI	GAAGAC	1 cut(s)	2507
Bbv12I	GWGCWC	1 cut(s)	3059
BbvI	GCAGC	9 cut(s)	599, 1003, 1010, 1031, 1054, 2413, 2638, 2666, 3203
BccI	CCATC	8 cut(s)	635, 734, 1053, 2005, 2358, 2411, 2696, 3032
BceAI	ACGGC	3 cut(s)	310, 2752, 3237
BcgI	CGANNNNNNTGC	4 cut(s)	195, 229, 2615, 2649
BciT130I	CCWGG	7 cut(s)	720, 1188, 1224, 1626, 1889, 2555, 2580
BclI	TGATCA	3 cut(s)	945, 967, 3207
BcnI	CCSGG	1 cut(s)	374
BcoDI	GTCTC	1 cut(s)	2631
BfaI	CTAG	8 cut(s)	783, 1008, 1313, 1922, 2414, 2546, 2609, 3158
BfmI	CTRYAG	1 cut(s)	1017
BfrI	CTTAAG	2 cut(s)	1082, 2530
BlnI	CCTAGG	1 cut(s)	2608
BlpI	GCTNAGC	1 cut(s)	2434
BmcAI	AGTACT	2 cut(s)	467, 1333
Bme1390I	CCNGG	8 cut(s)	374, 720, 1188, 1224, 1626, 1889, 2555, 2580
Bme18I	GGWCC	3 cut(s)	48, 2881, 3258
BmeRI	GACNNNNNGTC	1 cut(s)	3264
BmeT110I	CYCGRG	4 cut(s)	234, 610, 1442, 3037
BmgBI	CACGTC	1 cut(s)	2102
BmgT120I	GGNCC	6 cut(s)	48, 1648, 1649, 2441, 2881, 3258
BmiI	GGNNCC	7 cut(s)	648, 1281, 1650, 2022, 2384, 2686, 3260
BmrFI	CCNGG	8 cut(s)	374, 720, 1188, 1224, 1626, 1889, 2555, 2580
BmrI	ACTGGG	2 cut(s)	2071, 2381
BmsI	GCATC	8 cut(s)	661, 701, 1697, 2078, 2262, 2358, 2394, 2843
BmuI	ACTGGG	2 cut(s)	2071, 2381
BoxI	GACNNNNGTC	2 cut(s)	873, 3039
BpiI	GAAGAC	1 cut(s)	2507
BpmI	CTGGAG	4 cut(s)	84, 1995, 2499, 2842
Bpu10I	CCTNAGC	1 cut(s)	2332
Bpu1102I	GCTNAGC	1 cut(s)	2434
BpuEI	CTTGAG	2 cut(s)	1773, 2379
BpuMI	CCSGG	1 cut(s)	374
BsaBI	GATNNNNATC	1 cut(s)	1590
BsaJI	CCNNGG	5 cut(s)	1509, 1941, 2553, 2608, 2945
BsaWI	WCCGGW	3 cut(s)	45, 2287, 3070
BsaXI	ACNNNNNCTCC	4 cut(s)	2605, 2635, 2815, 2845
Bse1I	ACTGG	7 cut(s)	1615, 1708, 2077, 2357, 2387, 2825, 3007
Bse21I	CCTNAGG	1 cut(s)	828
Bse3DI	GCAATG	3 cut(s)	2027, 2754, 3087
Bse8I	GATNNNNATC	1 cut(s)	1590
BseAI	TCCGGA	1 cut(s)	2287
BseBI	CCWGG	7 cut(s)	720, 1188, 1224, 1626, 1889, 2555, 2580
BseDI	CCNNGG	5 cut(s)	1509, 1941, 2553, 2608, 2945
BseGI	GGATG	7 cut(s)	125, 716, 1712, 2047, 2172, 2373, 2500
BseJI	GATNNNNATC	1 cut(s)	1590
BseMI	GCAATG	3 cut(s)	2027, 2754, 3087
BseMII	CTCAG	9 cut(s)	410, 819, 923, 1233, 1509, 2346, 2448, 3044, 3072
BseNI	ACTGG	7 cut(s)	1615, 1708, 2077, 2357, 2387, 2825, 3007
BseRI	GAGGAG	2 cut(s)	1838, 2473
BseSI	GKGCMC	2 cut(s)	1652, 3157
BseXI	GCAGC	9 cut(s)	599, 1003, 1010, 1031, 1054, 2413, 2638, 2666, 3203
BseYI	CCCAGC	2 cut(s)	80, 1661
BsgI	GTGCAG	3 cut(s)	1026, 1870, 3202
Bsh1236I	CGCG	2 cut(s)	113, 1053
Bsh1285I	CGRYCG	1 cut(s)	1542
BshFI	GGCC	9 cut(s)	5, 121, 377, 1080, 1437, 1508, 1650, 2202, 2442
BshNI	GGYRCC	2 cut(s)	646, 2382
BsiEI	CGRYCG	1 cut(s)	1542
BsiHKAI	GWGCWC	1 cut(s)	3059
BsiHKCI	CYCGRG	4 cut(s)	234, 610, 1442, 3037
BsiSI	CCGG	7 cut(s)	46, 374, 708, 2288, 2590, 2682, 3071
BslFI	GGGAC	3 cut(s)	1102, 1932, 2536
BsmAI	GTCTC	1 cut(s)	2631
BsmBI	CGTCTC	1 cut(s)	2631
BsmFI	GGGAC	3 cut(s)	1102, 1932, 2536
BsmI	GAATGC	1 cut(s)	503
BsnI	GGCC	9 cut(s)	5, 121, 377, 1080, 1437, 1508, 1650, 2202, 2442
BsoBI	CYCGRG	4 cut(s)	234, 610, 1442, 3037
Bsp120I	GGGCCC	1 cut(s)	1648
Bsp1286I	GDGCHC	5 cut(s)	228, 280, 1652, 3059, 3157
Bsp13I	TCCGGA	1 cut(s)	2287
Bsp1407I	TGTACA	1 cut(s)	581
Bsp1720I	GCTNAGC	1 cut(s)	2434
BspANI	GGCC	9 cut(s)	5, 121, 377, 1080, 1437, 1508, 1650, 2202, 2442
BspCNI	CTCAG	9 cut(s)	409, 820, 924, 1234, 1510, 2345, 2447, 3045, 3071
BspEI	TCCGGA	1 cut(s)	2287
BspFNI	CGCG	2 cut(s)	113, 1053
BspHI	TCATGA	1 cut(s)	2344
BspLI	GGNNCC	7 cut(s)	648, 1281, 1650, 2022, 2384, 2686, 3260
BspMAI	CTGCAG	1 cut(s)	1021
BspPI	GGATC	7 cut(s)	278, 638, 841, 920, 1316, 2227, 2849
BspT107I	GGYRCC	2 cut(s)	646, 2382
BspTI	CTTAAG	2 cut(s)	1082, 2530
BsrDI	GCAATG	3 cut(s)	2027, 2754, 3087
BsrGI	TGTACA	1 cut(s)	581
BsrI	ACTGG	7 cut(s)	1615, 1708, 2077, 2357, 2387, 2825, 3007
BssECI	CCNNGG	5 cut(s)	1509, 1941, 2553, 2608, 2945
BssSI	CACGAG	3 cut(s)	1032, 2109, 3278
BssT1I	CCWWGG	3 cut(s)	1509, 2608, 2945
Bst2BI	CACGAG	3 cut(s)	1032, 2109, 3278
Bst2UI	CCWGG	7 cut(s)	720, 1188, 1224, 1626, 1889, 2555, 2580
Bst6I	CTCTTC	2 cut(s)	2232, 3229
BstAFI	CTTAAG	2 cut(s)	1082, 2530
BstAPI	GCANNNNNTGC	1 cut(s)	1028
BstAUI	TGTACA	1 cut(s)	581
BstC8I	GCNNGC	9 cut(s)	172, 260, 413, 1051, 1380, 2251, 2431, 2440, 2652
BstDSI	CCRYGG	1 cut(s)	1941
BstEII	GGTNACC	1 cut(s)	3271
BstF5I	GGATG	7 cut(s)	125, 716, 1712, 2047, 2172, 2373, 2500
BstFNI	CGCG	2 cut(s)	113, 1053
BstMAI	GTCTC	1 cut(s)	2631
BstMCI	CGRYCG	1 cut(s)	1542
BstMWI	GCNNNNNNNGC	7 cut(s)	110, 176, 1028, 2435, 2439, 3098, 3161
BstNI	CCWGG	7 cut(s)	720, 1188, 1224, 1626, 1889, 2555, 2580
BstNSI	RCATGY	4 cut(s)	262, 1031, 1870, 3128
BstPAI	GACNNNNGTC	2 cut(s)	873, 3039
BstPI	GGTNACC	1 cut(s)	3271
BstSCI	CCNGG	8 cut(s)	372, 718, 1186, 1222, 1624, 1887, 2553, 2578
BstSFI	CTRYAG	1 cut(s)	1017
BstSLI	GKGCMC	2 cut(s)	1652, 3157
BstUI	CGCG	2 cut(s)	113, 1053
BstV1I	GCAGC	9 cut(s)	599, 1003, 1010, 1031, 1054, 2413, 2638, 2666, 3203
BstV2I	GAAGAC	1 cut(s)	2507
BstX2I	RGATCY	2 cut(s)	912, 2219
BstXI	CCANNNNNNTGG	1 cut(s)	2364
BstYI	RGATCY	2 cut(s)	912, 2219
Bsu36I	CCTNAGG	1 cut(s)	828
BsuRI	GGCC	9 cut(s)	5, 121, 377, 1080, 1437, 1508, 1650, 2202, 2442
BtgI	CCRYGG	1 cut(s)	1941
BtrI	CACGTC	1 cut(s)	2102
BtsCI	GGATG	7 cut(s)	125, 716, 1712, 2047, 2172, 2373, 2500
BtsI	GCAGTG	1 cut(s)	1935
BtsIMutI	CAGTG	9 cut(s)	633, 789, 929, 1515, 1710, 1935, 2071, 2394, 3066
Cac8I	GCNNGC	9 cut(s)	172, 260, 413, 1051, 1380, 2251, 2431, 2440, 2652
CaiI	CAGNNNCTG	2 cut(s)	1661, 3216
CciI	TCATGA	1 cut(s)	2344
Cfr13I	GGNCC	6 cut(s)	48, 1648, 1649, 2441, 2881, 3258
CseI	GACGC	1 cut(s)	2648
CsiI	ACCWGGT	3 cut(s)	718, 1186, 1222
DraI	TTTAAA	1 cut(s)	1555
DraIII	CACNNNGTG	1 cut(s)	3150
DrdI	GACNNNNNNGTC	1 cut(s)	1520
DriI	GACNNNNNGTC	1 cut(s)	3264
DseDI	GACNNNNNNGTC	1 cut(s)	1520
EaeI	YGGCCR	4 cut(s)	3, 375, 1435, 1506
Eam1104I	CTCTTC	2 cut(s)	2232, 3229
Eam1105I	GACNNNNNGTC	1 cut(s)	3264
EarI	CTCTTC	2 cut(s)	2232, 3229
Ecl136II	GAGCTC	1 cut(s)	3057
Eco130I	CCWWGG	3 cut(s)	1509, 2608, 2945
Eco147I	AGGCCT	1 cut(s)	1080
Eco24I	GRGCYC	4 cut(s)	228, 280, 1652, 3059
Eco47I	GGWCC	3 cut(s)	48, 2881, 3258
Eco53kI	GAGCTC	1 cut(s)	3057
Eco57I	CTGAAG	5 cut(s)	40, 1184, 1334, 1356, 1638
Eco81I	CCTNAGG	1 cut(s)	828
Eco88I	CYCGRG	4 cut(s)	234, 610, 1442, 3037
Eco91I	GGTNACC	1 cut(s)	3271
EcoICRI	GAGCTC	1 cut(s)	3057
EcoO109I	RGGNCCY	1 cut(s)	1649
EcoO65I	GGTNACC	1 cut(s)	3271
EcoRI	GAATTC	2 cut(s)	527, 1150
EcoRII	CCWGG	7 cut(s)	718, 1186, 1222, 1624, 1887, 2553, 2578
EcoT14I	CCWWGG	3 cut(s)	1509, 2608, 2945
EcoT22I	ATGCAT	2 cut(s)	907, 1432
EcoT38I	GRGCYC	4 cut(s)	228, 280, 1652, 3059
ErhI	CCWWGG	3 cut(s)	1509, 2608, 2945
Esp3I	CGTCTC	1 cut(s)	2631
FalI	AAGNNNNNCTT	4 cut(s)	1065, 1097, 2187, 2219
FaqI	GGGAC	3 cut(s)	1102, 1932, 2536
FauI	CCCGC	3 cut(s)	27, 1127, 2484
FauNDI	CATATG	2 cut(s)	459, 1432
FbaI	TGATCA	3 cut(s)	945, 967, 3207
FokI	GGATG	7 cut(s)	112, 723, 1719, 2054, 2179, 2380, 2507
FriOI	GRGCYC	4 cut(s)	228, 280, 1652, 3059
FspBI	CTAG	8 cut(s)	783, 1008, 1313, 1922, 2414, 2546, 2609, 3158
GsaI	CCCAGC	2 cut(s)	84, 1665
GsuI	CTGGAG	4 cut(s)	84, 1995, 2499, 2842
HaeIII	GGCC	9 cut(s)	5, 121, 377, 1080, 1437, 1508, 1650, 2202, 2442
HapII	CCGG	7 cut(s)	46, 374, 708, 2288, 2590, 2682, 3071
HgaI	GACGC	1 cut(s)	2648
HincII	GTYRAC	3 cut(s)	660, 757, 864
HindII	GTYRAC	3 cut(s)	660, 757, 864
HindIII	AAGCTT	2 cut(s)	413, 3162
HpaI	GTTAAC	1 cut(s)	660
HpaII	CCGG	7 cut(s)	46, 374, 708, 2288, 2590, 2682, 3071
HphI	GGTGA	9 cut(s)	183, 418, 755, 1245, 1370, 2132, 2527, 3265, 3295
Hpy166II	GTNNAC	6 cut(s)	660, 757, 864, 2122, 2992, 3293
Hpy8I	GTNNAC	6 cut(s)	660, 757, 864, 2122, 2992, 3293
Hpy99I	CGWCG	4 cut(s)	217, 311, 2056, 2103
HpyCH4IV	ACGT	4 cut(s)	1963, 1990, 2101, 2275
HpyF10VI	GCNNNNNNNGC	7 cut(s)	110, 176, 1028, 2435, 2439, 3098, 3161
HpySE526I	ACGT	4 cut(s)	1963, 1990, 2101, 2275
Kpn2I	TCCGGA	1 cut(s)	2287
KpnI	GGTACC	2 cut(s)	650, 2386
Ksp22I	TGATCA	3 cut(s)	945, 967, 3207
KspAI	GTTAAC	1 cut(s)	660
LmnI	GCTCC	6 cut(s)	75, 168, 176, 500, 1658, 2684
Lsp1109I	GCAGC	9 cut(s)	599, 1003, 1010, 1031, 1054, 2413, 2638, 2666, 3203
LweI	GCATC	8 cut(s)	661, 701, 1697, 2078, 2262, 2358, 2394, 2843
MabI	ACCWGGT	3 cut(s)	718, 1186, 1222
MaeI	CTAG	8 cut(s)	783, 1008, 1313, 1922, 2414, 2546, 2609, 3158
MaeII	ACGT	4 cut(s)	1963, 1990, 2101, 2275
MaeIII	GTNAC	8 cut(s)	391, 1606, 1699, 1714, 2079, 2673, 3011, 3271
MfeI	CAATTG	2 cut(s)	201, 697
MflI	RGATCY	2 cut(s)	912, 2219
MhlI	GDGCHC	5 cut(s)	228, 280, 1652, 3059, 3157
MlsI	TGGCCA	2 cut(s)	1437, 1508
MluNI	TGGCCA	2 cut(s)	1437, 1508
MlyI	GAGTC	2 cut(s)	1522, 3049
MmeI	TCCRAC	1 cut(s)	195
Mox20I	TGGCCA	2 cut(s)	1437, 1508
Mph1103I	ATGCAT	2 cut(s)	907, 1432
MroI	TCCGGA	1 cut(s)	2287
MroXI	GAANNNNTTC	1 cut(s)	2352
MscI	TGGCCA	2 cut(s)	1437, 1508
MslI	CAYNNNNRTG	4 cut(s)	263, 842, 2129, 3278
Msp20I	TGGCCA	2 cut(s)	1437, 1508
MspA1I	CMGCKG	3 cut(s)	590, 2629, 2657
MspCI	CTTAAG	2 cut(s)	1082, 2530
MspI	CCGG	7 cut(s)	46, 374, 708, 2288, 2590, 2682, 3071
MspR9I	CCNGG	8 cut(s)	374, 720, 1188, 1224, 1626, 1889, 2555, 2580
MunI	CAATTG	2 cut(s)	201, 697
Mva1269I	GAATGC	1 cut(s)	503
MvaI	CCWGG	7 cut(s)	720, 1188, 1224, 1626, 1889, 2555, 2580
MvnI	CGCG	2 cut(s)	113, 1053
MwoI	GCNNNNNNNGC	7 cut(s)	110, 176, 1028, 2435, 2439, 3098, 3161
NciI	CCSGG	1 cut(s)	374
NdeI	CATATG	2 cut(s)	459, 1432
NlaIV	GGNNCC	7 cut(s)	648, 1281, 1650, 2022, 2384, 2686, 3260
NmuCI	GTSAC	2 cut(s)	1714, 3271
NsiI	ATGCAT	2 cut(s)	907, 1432
NspI	RCATGY	4 cut(s)	262, 1031, 1870, 3128
OliI	CACNNNNGTG	1 cut(s)	3278
PaeI	GCATGC	1 cut(s)	262
PaeR7I	CTCGAG	3 cut(s)	234, 610, 1442
PagI	TCATGA	1 cut(s)	2344
PceI	AGGCCT	1 cut(s)	1080
PcsI	WCGNNNNNNNCGW	1 cut(s)	2107
PctI	GAATGC	1 cut(s)	503
PdmI	GAANNNNTTC	1 cut(s)	2352
PfeI	GAWTC	9 cut(s)	60, 834, 898, 982, 1770, 1828, 1937, 1968, 2341
PflMI	CCANNNNNTGG	1 cut(s)	138
Ple19I	CGATCG	1 cut(s)	1542
PleI	GAGTC	2 cut(s)	1522, 3048
PpsI	GAGTC	2 cut(s)	1522, 3048
PshAI	GACNNNNGTC	2 cut(s)	873, 3039
PsiI	TTATAA	1 cut(s)	957
Psp124BI	GAGCTC	1 cut(s)	3059
Psp6I	CCWGG	7 cut(s)	718, 1186, 1222, 1624, 1887, 2553, 2578
PspEI	GGTNACC	1 cut(s)	3271
PspFI	CCCAGC	2 cut(s)	80, 1661
PspGI	CCWGG	7 cut(s)	718, 1186, 1222, 1624, 1887, 2553, 2578
PspN4I	GGNNCC	7 cut(s)	648, 1281, 1650, 2022, 2384, 2686, 3260
PspOMI	GGGCCC	1 cut(s)	1648
PspPI	GGNCC	6 cut(s)	48, 1648, 1649, 2441, 2881, 3258
PspXI	VCTCGAGB	1 cut(s)	234
PstI	CTGCAG	1 cut(s)	1021
PstNI	CAGNNNCTG	2 cut(s)	1661, 3216
PsuI	RGATCY	2 cut(s)	912, 2219
PvuI	CGATCG	1 cut(s)	1542
RseI	CAYNNNNRTG	4 cut(s)	263, 842, 2129, 3278
SacI	GAGCTC	1 cut(s)	3059
Sau96I	GGNCC	6 cut(s)	48, 1648, 1649, 2441, 2881, 3258
ScaI	AGTACT	2 cut(s)	467, 1333
SchI	GAGTC	2 cut(s)	1522, 3049
ScrFI	CCNGG	8 cut(s)	374, 720, 1188, 1224, 1626, 1889, 2555, 2580
SduI	GDGCHC	5 cut(s)	228, 280, 1652, 3059, 3157
SexAI	ACCWGGT	3 cut(s)	718, 1186, 1222
SfaNI	GCATC	8 cut(s)	661, 701, 1697, 2078, 2262, 2358, 2394, 2843
SfcI	CTRYAG	1 cut(s)	1017
Sfr274I	CTCGAG	3 cut(s)	234, 610, 1442
SinI	GGWCC	3 cut(s)	48, 2881, 3258
SlaI	CTCGAG	3 cut(s)	234, 610, 1442
SmiMI	CAYNNNNRTG	4 cut(s)	263, 842, 2129, 3278
SmlI	CTYRAG	7 cut(s)	234, 610, 1082, 1442, 1788, 2394, 2530
SmoI	CTYRAG	7 cut(s)	234, 610, 1082, 1442, 1788, 2394, 2530
SphI	GCATGC	1 cut(s)	262
SseBI	AGGCCT	1 cut(s)	1080
SspI	AATATT	1 cut(s)	1369
SspMI	CTAG	8 cut(s)	783, 1008, 1313, 1922, 2414, 2546, 2609, 3158
SstI	GAGCTC	1 cut(s)	3059
StuI	AGGCCT	1 cut(s)	1080
StyD4I	CCNGG	8 cut(s)	372, 718, 1186, 1222, 1624, 1887, 2553, 2578
StyI	CCWWGG	3 cut(s)	1509, 2608, 2945
TaiI	ACGT	4 cut(s)	1966, 1993, 2104, 2278
TaqII	GACCGA	1 cut(s)	2583
TatI	WGTACW	5 cut(s)	465, 581, 1331, 2595, 2991
TauI	GCSGC	3 cut(s)	8, 113, 2632
TfiI	GAWTC	9 cut(s)	60, 834, 898, 982, 1770, 1828, 1937, 1968, 2341
TscAI	CASTG	9 cut(s)	640, 796, 936, 1522, 1717, 1935, 2071, 2394, 3066
TseFI	GTSAC	2 cut(s)	1714, 3271
TseI	GCWGC	9 cut(s)	587, 998, 1016, 1019, 1067, 2426, 2626, 2654, 3216
Tsp45I	GTSAC	2 cut(s)	1714, 3271
TspGWI	ACGGA	2 cut(s)	1930, 1999
TspRI	CASTG	9 cut(s)	640, 796, 936, 1522, 1717, 1935, 2071, 2394, 3066
Van91I	CCANNNNNTGG	1 cut(s)	138
Vha464I	CTTAAG	2 cut(s)	1082, 2530
VpaK11BI	GGWCC	3 cut(s)	48, 2881, 3258
XapI	RAATTY	5 cut(s)	41, 185, 527, 1150, 1416
XbaI	TCTAGA	1 cut(s)	2413
XceI	RCATGY	4 cut(s)	262, 1031, 1870, 3128
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2875
XhoI	CTCGAG	3 cut(s)	234, 610, 1442
XmaJI	CCTAGG	1 cut(s)	2608
XmnI	GAANNNNTTC	1 cut(s)	2352
XspI	CTAG	8 cut(s)	783, 1008, 1313, 1922, 2414, 2546, 2609, 3158
ZrmI	AGTACT	2 cut(s)	467, 1333
Zsp2I	ATGCAT	2 cut(s)	907, 1432

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.